RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
CDK13-203ENST00000465643 DPYSL4O14531 572 aa8.72□□□□□ -1.01
CDK13-203ENST00000465643 GPIHBP1Q8IV16 184 aa8.72□□□□□ -1.01
CDK13-203ENST00000465643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.01
CDK13-203ENST00000465643 TTLL13PA6NNM8 815 aa8.71□□□□□ -1.02
CDK13-203ENST00000465643 GPHNQ9NQX3 736 aaPredicted RBP8.71□□□□□ -1.02
CDK13-203ENST00000465643 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
CDK13-203ENST00000465643 DSG2Q14126 1118 aa8.7□□□□□ -1.02
CDK13-203ENST00000465643 ILDR1Q86SU0 546 aaPredicted RBP8.7□□□□□ -1.02
CDK13-203ENST00000465643 ARXQ96QS3 562 aa8.7□□□□□ -1.02
CDK13-203ENST00000465643 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
CDK13-203ENST00000465643 AK7Q96M32 723 aa8.68□□□□□ -1.02
CDK13-203ENST00000465643 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
CDK13-203ENST00000465643 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
CDK13-203ENST00000465643 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
CDK13-203ENST00000465643 TIE1P35590 1138 aa8.65□□□□□ -1.02
CDK13-203ENST00000465643 C19orf67A6NJJ6 358 aa8.65□□□□□ -1.02
CDK13-203ENST00000465643 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
CDK13-203ENST00000465643 GALR2O43603 387 aaPredicted RBP8.63□□□□□ -1.03
CDK13-203ENST00000465643 PDIA6Q15084 440 aa8.63□□□□□ -1.03
CDK13-203ENST00000465643 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
CDK13-203ENST00000465643 TRIM66O15016 1216 aa8.63□□□□□ -1.03
CDK13-203ENST00000465643 GPR37O15354 613 aa8.62□□□□□ -1.03
CDK13-203ENST00000465643 PDE4DQ08499 809 aa8.61□□□□□ -1.03
CDK13-203ENST00000465643 PDCD7Q8N8D1 485 aaKnown RBP8.61□□□□□ -1.03
CDK13-203ENST00000465643 FOXK1P85037 733 aa8.59□□□□□ -1.03
CDK13-203ENST00000465643 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
CDK13-203ENST00000465643 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
CDK13-203ENST00000465643 C2orf72A6NCS6 295 aa8.58□□□□□ -1.04
CDK13-203ENST00000465643 GRXCR2A6NFK2 248 aa8.58□□□□□ -1.04
CDK13-203ENST00000465643 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
CDK13-203ENST00000465643 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
CDK13-203ENST00000465643 ABCC9O60706 1549 aa8.57□□□□□ -1.04
CDK13-203ENST00000465643 ATN1P54259 1190 aaPredicted RBP8.56□□□□□ -1.04
CDK13-203ENST00000465643 FAM117AQ9C073 453 aa8.56□□□□□ -1.04
CDK13-203ENST00000465643 UPF1Q92900 1129 aaKnown RBP eCLIP8.55□□□□□ -1.04
CDK13-203ENST00000465643 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
CDK13-203ENST00000465643 KIF3CO14782 793 aa8.54□□□□□ -1.04
CDK13-203ENST00000465643 FECHP22830 423 aa8.53□□□□□ -1.04
CDK13-203ENST00000465643 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
CDK13-203ENST00000465643 EVX2Q03828 476 aa8.53□□□□□ -1.04
CDK13-203ENST00000465643 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
CDK13-203ENST00000465643 CCDC102AQ96A19 550 aa8.53□□□□□ -1.04
CDK13-203ENST00000465643 TMEM121BQ9BXQ6 578 aaPredicted RBP8.53□□□□□ -1.04
CDK13-203ENST00000465643 BOLA1Q9Y3E2 137 aa8.53□□□□□ -1.04
CDK13-203ENST00000465643 OSBPP22059 807 aa8.51□□□□□ -1.05
CDK13-203ENST00000465643 TMEM92Q6UXU6 159 aa8.51□□□□□ -1.05
CDK13-203ENST00000465643 DDX12PQ92771 950 aa8.51□□□□□ -1.05
CDK13-203ENST00000465643 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
CDK13-203ENST00000465643 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
CDK13-203ENST00000465643 ZNF316A6NFI3 1004 aaPredicted RBP8.49□□□□□ -1.05
CDK13-203ENST00000465643 IRF6O14896 467 aa8.49□□□□□ -1.05
CDK13-203ENST00000465643 ATMINO43313 823 aaPredicted RBP8.49□□□□□ -1.05
CDK13-203ENST00000465643 MINK1Q8N4C8 1332 aaPredicted RBP8.49□□□□□ -1.05
CDK13-203ENST00000465643 OCEL1Q9H607 264 aa8.49□□□□□ -1.05
CDK13-203ENST00000465643 MAP2K5Q13163 448 aa8.48□□□□□ -1.05
CDK13-203ENST00000465643 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
CDK13-203ENST00000465643 ZMYND15Q9H091 742 aa8.46□□□□□ -1.06
CDK13-203ENST00000465643 GNPATO15228 680 aa8.46□□□□□ -1.06
CDK13-203ENST00000465643 OXER1Q8TDS5 423 aa8.46□□□□□ -1.06
CDK13-203ENST00000465643 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
CDK13-203ENST00000465643 G3V3G9 751 aa8.44□□□□□ -1.06
CDK13-203ENST00000465643 HAX1O00165 279 aa8.44□□□□□ -1.06
CDK13-203ENST00000465643 AMHR2Q16671 573 aa8.44□□□□□ -1.06
CDK13-203ENST00000465643 ASTLQ6HA08 431 aaPredicted RBP8.44□□□□□ -1.06
CDK13-203ENST00000465643 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
CDK13-203ENST00000465643 FCHSD2O94868 740 aa8.42□□□□□ -1.06
CDK13-203ENST00000465643 PLCG2P16885 1265 aa8.42□□□□□ -1.06
CDK13-203ENST00000465643 PTGER2P43116 358 aa8.42□□□□□ -1.06
CDK13-203ENST00000465643 HIC1Q14526 733 aa8.42□□□□□ -1.06
CDK13-203ENST00000465643 EVI5O60447 810 aa8.41□□□□□ -1.06
CDK13-203ENST00000465643 IER5LQ5T953 404 aa8.41□□□□□ -1.06
CDK13-203ENST00000465643 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
CDK13-203ENST00000465643 REPIN1Q9BWE0 567 aaKnown RBP8.41□□□□□ -1.06
CDK13-203ENST00000465643 PTGDRQ13258 359 aa8.4□□□□□ -1.06
CDK13-203ENST00000465643 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
CDK13-203ENST00000465643 PELP1Q8IZL8 1130 aaKnown RBP8.4□□□□□ -1.06
CDK13-203ENST00000465643 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.06
CDK13-203ENST00000465643 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
CDK13-203ENST00000465643 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
CDK13-203ENST00000465643 MS4A1P11836 297 aa8.39□□□□□ -1.07
CDK13-203ENST00000465643 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
CDK13-203ENST00000465643 ARID3AQ99856 593 aa8.37□□□□□ -1.07
CDK13-203ENST00000465643 ARID3CA6NKF2 412 aa8.36□□□□□ -1.07
CDK13-203ENST00000465643 TBC1D12O60347 775 aa8.36□□□□□ -1.07
CDK13-203ENST00000465643 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
CDK13-203ENST00000465643 L3MBTL3Q96JM7 780 aaPredicted RBP8.36□□□□□ -1.07
CDK13-203ENST00000465643 ZCCHC6Q5VYS8 1495 aaKnown RBP8.35□□□□□ -1.07
CDK13-203ENST00000465643 POTEFA5A3E0 1075 aa8.35□□□□□ -1.07
CDK13-203ENST00000465643 NPDC1Q9NQX5 325 aaPredicted RBP8.34□□□□□ -1.07
CDK13-203ENST00000465643 SEC24BO95487 1268 aa8.34□□□□□ -1.07
CDK13-203ENST00000465643 PHOX2BQ99453 314 aa8.34□□□□□ -1.07
CDK13-203ENST00000465643 RBM33Q96EV2 1170 aaKnown RBP8.33□□□□□ -1.08
CDK13-203ENST00000465643 ONECUT3O60422 494 aaPredicted RBP8.32□□□□□ -1.08
CDK13-203ENST00000465643 TSR1Q2NL82 804 aaKnown RBP8.32□□□□□ -1.08
CDK13-203ENST00000465643 FAM161AQ3B820 660 aa8.32□□□□□ -1.08
CDK13-203ENST00000465643 PTCD2Q8WV60 388 aaKnown RBP8.32□□□□□ -1.08
CDK13-203ENST00000465643 CLCN6P51797 869 aa8.31□□□□□ -1.08
CDK13-203ENST00000465643 NLRP7Q8WX94 980 aa8.31□□□□□ -1.08
CDK13-203ENST00000465643 MAP3K7O43318 606 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms