RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 RAPGEF3O95398 923 aa19.94■□□□□ 0.78
CNKSR1-203ENST00000465415 TIAM1Q13009 1591 aa19.93■□□□□ 0.78
CNKSR1-203ENST00000465415 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
CNKSR1-203ENST00000465415 RICTORQ6R327 1708 aa19.92■□□□□ 0.78
CNKSR1-203ENST00000465415 CDC42BPBQ9Y5S2 1711 aa19.91■□□□□ 0.78
CNKSR1-203ENST00000465415 SCAPERQ9BY12 1400 aa19.9■□□□□ 0.78
CNKSR1-203ENST00000465415 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
CNKSR1-203ENST00000465415 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.77
CNKSR1-203ENST00000465415 ZMYM4Q5VZL5 1548 aa19.87■□□□□ 0.77
CNKSR1-203ENST00000465415 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
CNKSR1-203ENST00000465415 CCNB3Q8WWL7 1395 aa19.86■□□□□ 0.77
CNKSR1-203ENST00000465415 MAP3K1Q13233 1512 aa19.86■□□□□ 0.77
CNKSR1-203ENST00000465415 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
CNKSR1-203ENST00000465415 ABCC1P33527 1531 aa19.85■□□□□ 0.77
CNKSR1-203ENST00000465415 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
CNKSR1-203ENST00000465415 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
CNKSR1-203ENST00000465415 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.76
CNKSR1-203ENST00000465415 ITSN2Q9NZM3 1697 aa19.82■□□□□ 0.76
CNKSR1-203ENST00000465415 ZFYVE16Q7Z3T8 1539 aa19.81■□□□□ 0.76
CNKSR1-203ENST00000465415 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
CNKSR1-203ENST00000465415 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
CNKSR1-203ENST00000465415 SAMD9LQ8IVG5 1584 aa19.8■□□□□ 0.76
CNKSR1-203ENST00000465415 KDM5CP41229 1560 aa19.79■□□□□ 0.76
CNKSR1-203ENST00000465415 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
CNKSR1-203ENST00000465415 ARHGEF12Q9NZN5 1544 aa19.78■□□□□ 0.76
CNKSR1-203ENST00000465415 KDM4FA0A1W2PPD8 638 aa19.78■□□□□ 0.76
CNKSR1-203ENST00000465415 ZNF777Q9ULD5 760 aaPredicted RBP19.78■□□□□ 0.76
CNKSR1-203ENST00000465415 YEATS2Q9ULM3 1422 aa19.77■□□□□ 0.76
CNKSR1-203ENST00000465415 SYCP2Q9BX26 1530 aa19.77■□□□□ 0.76
CNKSR1-203ENST00000465415 APLP2Q06481 763 aa19.77■□□□□ 0.76
CNKSR1-203ENST00000465415 PLEKHH2Q8IVE3 1493 aa19.76■□□□□ 0.75
CNKSR1-203ENST00000465415 TRAPPC8Q9Y2L5 1435 aa19.76■□□□□ 0.75
CNKSR1-203ENST00000465415 HECW2Q9P2P5 1572 aa19.75■□□□□ 0.75
CNKSR1-203ENST00000465415 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
CNKSR1-203ENST00000465415 KANK4Q5T7N3 995 aaPredicted RBP19.74■□□□□ 0.75
CNKSR1-203ENST00000465415 KIAA1107Q9UPP5 1409 aa19.73■□□□□ 0.75
CNKSR1-203ENST00000465415 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
CNKSR1-203ENST00000465415 ARID4BQ4LE39 1312 aaPredicted RBP19.7■□□□□ 0.74
CNKSR1-203ENST00000465415 MYT1LQ9UL68 1186 aa19.69■□□□□ 0.74
CNKSR1-203ENST00000465415 C9orf84Q5VXU9 1444 aa19.68■□□□□ 0.74
CNKSR1-203ENST00000465415 ATP10AO60312 1499 aa19.68■□□□□ 0.74
CNKSR1-203ENST00000465415 HNRNPMP52272 730 aaKnown RBP eCLIP19.68■□□□□ 0.74
CNKSR1-203ENST00000465415 DIP2CQ9Y2E4 1556 aa19.68■□□□□ 0.74
CNKSR1-203ENST00000465415 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
CNKSR1-203ENST00000465415 CAMSAP2Q08AD1 1489 aa19.67■□□□□ 0.74
CNKSR1-203ENST00000465415 ABCA6Q8N139 1617 aa19.67■□□□□ 0.74
CNKSR1-203ENST00000465415 BCORL1Q5H9F3 1711 aa19.66■□□□□ 0.74
CNKSR1-203ENST00000465415 SIGLEC1Q9BZZ2 1709 aa19.65■□□□□ 0.74
CNKSR1-203ENST00000465415 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
CNKSR1-203ENST00000465415 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
CNKSR1-203ENST00000465415 MBD5Q9P267 1494 aa19.64■□□□□ 0.73
CNKSR1-203ENST00000465415 ADAMTSL3P82987 1691 aa19.64■□□□□ 0.73
CNKSR1-203ENST00000465415 REREQ9P2R6 1566 aa19.63■□□□□ 0.73
CNKSR1-203ENST00000465415 INO80Q9ULG1 1556 aaPredicted RBP19.63■□□□□ 0.73
CNKSR1-203ENST00000465415 ATP7AQ04656 1500 aa19.63■□□□□ 0.73
CNKSR1-203ENST00000465415 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
CNKSR1-203ENST00000465415 MIA2Q96PC5 1412 aa19.61■□□□□ 0.73
CNKSR1-203ENST00000465415 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
CNKSR1-203ENST00000465415 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
CNKSR1-203ENST00000465415 ARHGEF5Q12774 1597 aa19.58■□□□□ 0.73
CNKSR1-203ENST00000465415 AGLP35573 1532 aa19.56■□□□□ 0.72
CNKSR1-203ENST00000465415 MLECQ14165 292 aa19.55■□□□□ 0.72
CNKSR1-203ENST00000465415 PTPRMP28827 1452 aa19.54■□□□□ 0.72
CNKSR1-203ENST00000465415 RTEL1-TNFRSF6BF6WH68 1400 aa19.54■□□□□ 0.72
CNKSR1-203ENST00000465415 RSPH4AQ5TD94 716 aa19.54■□□□□ 0.72
CNKSR1-203ENST00000465415 RIMS1Q86UR5 1692 aaKnown RBP19.53■□□□□ 0.72
CNKSR1-203ENST00000465415 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
CNKSR1-203ENST00000465415 PTPN23Q9H3S7 1636 aa19.53■□□□□ 0.72
CNKSR1-203ENST00000465415 A2MP01023 1474 aa19.52■□□□□ 0.72
CNKSR1-203ENST00000465415 PLXNC1O60486 1568 aa19.52■□□□□ 0.71
CNKSR1-203ENST00000465415 FER1L4A9Z1Z3 1794 aa19.52■□□□□ 0.71
CNKSR1-203ENST00000465415 ADGBQ8N7X0 1667 aa19.51■□□□□ 0.71
CNKSR1-203ENST00000465415 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
CNKSR1-203ENST00000465415 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
CNKSR1-203ENST00000465415 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
CNKSR1-203ENST00000465415 MAST1Q9Y2H9 1570 aa19.48■□□□□ 0.71
CNKSR1-203ENST00000465415 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
CNKSR1-203ENST00000465415 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
CNKSR1-203ENST00000465415 SHANK2Q9UPX8 1470 aa19.43■□□□□ 0.7
CNKSR1-203ENST00000465415 DHX29Q7Z478 1369 aaKnown RBP19.42■□□□□ 0.7
CNKSR1-203ENST00000465415 ABCC5O15440 1437 aa19.42■□□□□ 0.7
CNKSR1-203ENST00000465415 DAPK1P53355 1430 aa19.42■□□□□ 0.7
CNKSR1-203ENST00000465415 ESF1Q9H501 851 aaKnown RBP19.4■□□□□ 0.7
CNKSR1-203ENST00000465415 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
CNKSR1-203ENST00000465415 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.69
CNKSR1-203ENST00000465415 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
CNKSR1-203ENST00000465415 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
CNKSR1-203ENST00000465415 GGT6Q6P531 493 aa19.35■□□□□ 0.69
CNKSR1-203ENST00000465415 MROH2AA6NES4 1674 aa19.34■□□□□ 0.69
CNKSR1-203ENST00000465415 KIF3BO15066 747 aa19.34■□□□□ 0.69
CNKSR1-203ENST00000465415 DUOX2Q9NRD8 1548 aa19.34■□□□□ 0.69
CNKSR1-203ENST00000465415 C3P01024 1663 aa19.33■□□□□ 0.69
CNKSR1-203ENST00000465415 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
CNKSR1-203ENST00000465415 CLTCQ00610 1675 aaKnown RBP19.33■□□□□ 0.68
CNKSR1-203ENST00000465415 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.68
CNKSR1-203ENST00000465415 CEBPAP49715 358 aaPredicted RBP19.32■□□□□ 0.68
CNKSR1-203ENST00000465415 ANKRD30AQ9BXX3 1397 aa19.31■□□□□ 0.68
CNKSR1-203ENST00000465415 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
CNKSR1-203ENST00000465415 LMTK3Q96Q04 1460 aa19.3■□□□□ 0.68
CNKSR1-203ENST00000465415 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms