RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 SCAPERQ9BY12 1400 aa35.44■■■■□ 3.26
EDEM1-205ENST00000465187 ZFYVE16Q7Z3T8 1539 aa35.42■■■■□ 3.26
EDEM1-205ENST00000465187 POGZQ7Z3K3 1410 aa35.41■■■■□ 3.26
EDEM1-205ENST00000465187 RIMS1Q86UR5 1692 aaKnown RBP35.39■■■■□ 3.26
EDEM1-205ENST00000465187 CASKIN1Q8WXD9 1431 aa35.39■■■■□ 3.26
EDEM1-205ENST00000465187 CDK11AQ9UQ88 783 aaPredicted RBP35.38■■■■□ 3.25
EDEM1-205ENST00000465187 CDC42BPBQ9Y5S2 1711 aa35.37■■■■□ 3.25
EDEM1-205ENST00000465187 ARHGAP5Q13017 1502 aa35.34■■■■□ 3.25
EDEM1-205ENST00000465187 CLIP1P30622 1438 aa35.32■■■■□ 3.25
EDEM1-205ENST00000465187 EFCAB2Q5VUJ9 269 aa35.31■■■■□ 3.24
EDEM1-205ENST00000465187 CCDC18Q5T9S5 1454 aa35.29■■■■□ 3.24
EDEM1-205ENST00000465187 MAGI2Q86UL8 1455 aa35.29■■■■□ 3.24
EDEM1-205ENST00000465187 PREX2Q70Z35 1606 aa35.27■■■■□ 3.24
EDEM1-205ENST00000465187 FYCO1Q9BQS8 1478 aa35.26■■■■□ 3.23
EDEM1-205ENST00000465187 CDC42BPAQ5VT25 1732 aa35.23■■■■□ 3.23
EDEM1-205ENST00000465187 MLECQ14165 292 aa35.21■■■■□ 3.23
EDEM1-205ENST00000465187 AFAP1Q8N556 730 aa35.21■■■■□ 3.23
EDEM1-205ENST00000465187 KDM5CP41229 1560 aa35.21■■■■□ 3.23
EDEM1-205ENST00000465187 FER1L4A9Z1Z3 1794 aa35.2■■■■□ 3.23
EDEM1-205ENST00000465187 ARHGEF12Q9NZN5 1544 aa35.19■■■■□ 3.22
EDEM1-205ENST00000465187 PLPPR3Q6T4P5 718 aa35.18■■■■□ 3.22
EDEM1-205ENST00000465187 ATP10AO60312 1499 aa35.17■■■■□ 3.22
EDEM1-205ENST00000465187 ZNF518AQ6AHZ1 1483 aa35.17■■■■□ 3.22
EDEM1-205ENST00000465187 ITSN2Q9NZM3 1697 aa35.16■■■■□ 3.22
EDEM1-205ENST00000465187 ABCC1P33527 1531 aa35.16■■■■□ 3.22
EDEM1-205ENST00000465187 ILDR1Q86SU0 546 aaPredicted RBP35.15■■■■□ 3.22
EDEM1-205ENST00000465187 LMTK3Q96Q04 1460 aa35.15■■■■□ 3.22
EDEM1-205ENST00000465187 C9orf84Q5VXU9 1444 aa35.14■■■■□ 3.22
EDEM1-205ENST00000465187 DIP2CQ9Y2E4 1556 aa35.13■■■■□ 3.21
EDEM1-205ENST00000465187 ABCA6Q8N139 1617 aa35.12■■■■□ 3.21
EDEM1-205ENST00000465187 TRAPPC8Q9Y2L5 1435 aa35.12■■■■□ 3.21
EDEM1-205ENST00000465187 SAMD9LQ8IVG5 1584 aa35.05■■■■□ 3.2
EDEM1-205ENST00000465187 KIDINS220Q9ULH0 1771 aa35.02■■■■□ 3.2
EDEM1-205ENST00000465187 MYT1LQ9UL68 1186 aa35.01■■■■□ 3.2
EDEM1-205ENST00000465187 GPATCH8Q9UKJ3 1502 aaKnown RBP35.01■■■■□ 3.19
EDEM1-205ENST00000465187 MLH3Q9UHC1 1453 aa35■■■■□ 3.19
EDEM1-205ENST00000465187 CEP162Q5TB80 1403 aa34.98■■■■□ 3.19
EDEM1-205ENST00000465187 SYCP2Q9BX26 1530 aa34.97■■■■□ 3.19
EDEM1-205ENST00000465187 HSPA2P54652 639 aa34.97■■■■□ 3.19
EDEM1-205ENST00000465187 ZNF777Q9ULD5 760 aaPredicted RBP34.97■■■■□ 3.19
EDEM1-205ENST00000465187 REREQ9P2R6 1566 aa34.96■■■■□ 3.19
EDEM1-205ENST00000465187 CEBPAP49715 358 aaPredicted RBP34.93■■■■□ 3.18
EDEM1-205ENST00000465187 MTUS2Q5JR59 1369 aa34.87■■■■□ 3.17
EDEM1-205ENST00000465187 HNRNPMP52272 730 aaKnown RBP eCLIP34.87■■■■□ 3.171e-9■■■□□ 16.5
EDEM1-205ENST00000465187 TIAM1Q13009 1591 aa34.87■■■■□ 3.17
EDEM1-205ENST00000465187 CCNB3Q8WWL7 1395 aa34.84■■■■□ 3.17
EDEM1-205ENST00000465187 PREX1Q8TCU6 1659 aa34.83■■■■□ 3.17
EDEM1-205ENST00000465187 AGLP35573 1532 aa34.83■■■■□ 3.17
EDEM1-205ENST00000465187 C3P01024 1663 aa34.82■■■■□ 3.17
EDEM1-205ENST00000465187 EHBP1L1Q8N3D4 1523 aa34.81■■■■□ 3.16
EDEM1-205ENST00000465187 LOC105371045A0A1W2PR82 267 aa34.8■■■■□ 3.16
EDEM1-205ENST00000465187 CFDP1Q9UEE9 299 aaPredicted RBP34.8■■■■□ 3.16
EDEM1-205ENST00000465187 SUPT6HQ7KZ85 1726 aaKnown RBP34.78■■■■□ 3.16
EDEM1-205ENST00000465187 INO80Q9ULG1 1556 aaPredicted RBP34.78■■■■□ 3.16
EDEM1-205ENST00000465187 ZNF644Q9H582 1327 aaPredicted RBP34.78■■■■□ 3.16
EDEM1-205ENST00000465187 ATP7AQ04656 1500 aa34.76■■■■□ 3.16
EDEM1-205ENST00000465187 SPAG9O60271 1321 aaKnown RBP34.74■■■■□ 3.15
EDEM1-205ENST00000465187 KIAA1107Q9UPP5 1409 aa34.73■■■■□ 3.15
EDEM1-205ENST00000465187 PLEKHH2Q8IVE3 1493 aa34.7■■■■□ 3.15
EDEM1-205ENST00000465187 PLXNC1O60486 1568 aa34.67■■■■□ 3.14
EDEM1-205ENST00000465187 STRCQ7RTU9 1775 aa34.66■■■■□ 3.14
EDEM1-205ENST00000465187 MBD5Q9P267 1494 aa34.65■■■■□ 3.14
EDEM1-205ENST00000465187 NCOA2Q15596 1464 aa34.63■■■■□ 3.13
EDEM1-205ENST00000465187 SETD1BQ9UPS6 1966 aaKnown RBP34.62■■■■□ 3.13
EDEM1-205ENST00000465187 A2MP01023 1474 aa34.61■■■■□ 3.13
EDEM1-205ENST00000465187 UHRF1BP1Q6BDS2 1440 aa34.6■■■■□ 3.13
EDEM1-205ENST00000465187 CLTCQ00610 1675 aaKnown RBP34.6■■■■□ 3.13
EDEM1-205ENST00000465187 ADGBQ8N7X0 1667 aa34.58■■■■□ 3.13
EDEM1-205ENST00000465187 MROH2AA6NES4 1674 aa34.57■■■■□ 3.13
EDEM1-205ENST00000465187 FBXO41Q8TF61 875 aa34.57■■■■□ 3.12
EDEM1-205ENST00000465187 VPS8Q8N3P4 1428 aa34.56■■■■□ 3.12
EDEM1-205ENST00000465187 ESF1Q9H501 851 aaKnown RBP34.56■■■■□ 3.12
EDEM1-205ENST00000465187 CAMSAP2Q08AD1 1489 aa34.54■■■■□ 3.12
EDEM1-205ENST00000465187 CNTLNQ9NXG0 1405 aa34.53■■■■□ 3.12
EDEM1-205ENST00000465187 ZMYM3Q14202 1370 aa34.48■■■■□ 3.11
EDEM1-205ENST00000465187 LRRC9Q6ZRR7 1453 aa34.47■■■■□ 3.11
EDEM1-205ENST00000465187 GGT6Q6P531 493 aa34.46■■■■□ 3.11
EDEM1-205ENST00000465187 KANK4Q5T7N3 995 aaPredicted RBP34.44■■■■□ 3.1
EDEM1-205ENST00000465187 CCDC141Q6ZP82 1450 aa34.44■■■■□ 3.1
EDEM1-205ENST00000465187 RTEL1-TNFRSF6BF6WH68 1400 aa34.42■■■■□ 3.1
EDEM1-205ENST00000465187 NPATQ14207 1427 aa34.38■■■■□ 3.09
EDEM1-205ENST00000465187 MYO3AQ8NEV4 1616 aa34.38■■■■□ 3.09
EDEM1-205ENST00000465187 CERKQ8TCT0 537 aa34.37■■■■□ 3.09
EDEM1-205ENST00000465187 PTPRKQ15262 1439 aa34.36■■■■□ 3.09
EDEM1-205ENST00000465187 ARHGEF5Q12774 1597 aa34.36■■■■□ 3.09
EDEM1-205ENST00000465187 DHX29Q7Z478 1369 aaKnown RBP34.36■■■■□ 3.09
EDEM1-205ENST00000465187 CAMSAP1Q5T5Y3 1602 aa34.33■■■■□ 3.09
EDEM1-205ENST00000465187 NCOA1Q15788 1441 aa34.32■■■■□ 3.08
EDEM1-205ENST00000465187 ZNF142P52746 1687 aaPredicted RBP34.31■■■■□ 3.08
EDEM1-205ENST00000465187 MAP3K1Q13233 1512 aa34.31■■■■□ 3.08
EDEM1-205ENST00000465187 KIF3BO15066 747 aa34.27■■■■□ 3.08
EDEM1-205ENST00000465187 PTPRTO14522 1441 aa34.26■■■■□ 3.07
EDEM1-205ENST00000465187 CEP170BQ9Y4F5 1589 aaPredicted RBP34.25■■■■□ 3.07
EDEM1-205ENST00000465187 DMRT2Q9Y5R5 561 aa34.24■■■■□ 3.07
EDEM1-205ENST00000465187 MYOM3Q5VTT5 1437 aa34.22■■■■□ 3.07
EDEM1-205ENST00000465187 MAST1Q9Y2H9 1570 aa34.2■■■■□ 3.07
EDEM1-205ENST00000465187 RSPH4AQ5TD94 716 aa34.2■■■■□ 3.07
EDEM1-205ENST00000465187 NCKAP5LQ9HCH0 1330 aa34.2■■■■□ 3.07
EDEM1-205ENST00000465187 KDM5DQ9BY66 1539 aa34.2■■■■□ 3.06
EDEM1-205ENST00000465187 PPP6R1Q9UPN7 881 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms