RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 POGZQ7Z3K3 1410 aa31.81■■■□□ 2.68
MCF2L2-206ENST00000464626 MADDQ8WXG6 1647 aa31.8■■■□□ 2.68
MCF2L2-206ENST00000464626 EFCAB2Q5VUJ9 269 aa31.8■■■□□ 2.68
MCF2L2-206ENST00000464626 CLIP1P30622 1438 aa31.8■■■□□ 2.68
MCF2L2-206ENST00000464626 CASKIN1Q8WXD9 1431 aa31.8■■■□□ 2.68
MCF2L2-206ENST00000464626 YEATS2Q9ULM3 1422 aa31.77■■■□□ 2.68
MCF2L2-206ENST00000464626 CCDC18Q5T9S5 1454 aa31.76■■■□□ 2.67
MCF2L2-206ENST00000464626 PCF11O94913 1555 aaKnown RBP31.75■■■□□ 2.67
MCF2L2-206ENST00000464626 SIGLEC1Q9BZZ2 1709 aa31.7■■■□□ 2.67
MCF2L2-206ENST00000464626 ARHGAP5Q13017 1502 aa31.7■■■□□ 2.66
MCF2L2-206ENST00000464626 RIMS1Q86UR5 1692 aaKnown RBP31.67■■■□□ 2.66
MCF2L2-206ENST00000464626 FYCO1Q9BQS8 1478 aa31.66■■■□□ 2.66
MCF2L2-206ENST00000464626 ZNF518AQ6AHZ1 1483 aa31.65■■■□□ 2.66
MCF2L2-206ENST00000464626 CDC42BPBQ9Y5S2 1711 aa31.65■■■□□ 2.66
MCF2L2-206ENST00000464626 ATP10AO60312 1499 aa31.65■■■□□ 2.66
MCF2L2-206ENST00000464626 KDM5CP41229 1560 aa31.63■■■□□ 2.65
MCF2L2-206ENST00000464626 PREX2Q70Z35 1606 aa31.61■■■□□ 2.65
MCF2L2-206ENST00000464626 C9orf84Q5VXU9 1444 aa31.61■■■□□ 2.65
MCF2L2-206ENST00000464626 ILDR1Q86SU0 546 aaPredicted RBP31.58■■■□□ 2.65
MCF2L2-206ENST00000464626 LMTK3Q96Q04 1460 aa31.55■■■□□ 2.64
MCF2L2-206ENST00000464626 AFAP1Q8N556 730 aa31.55■■■□□ 2.64
MCF2L2-206ENST00000464626 FER1L4A9Z1Z3 1794 aa31.54■■■□□ 2.64
MCF2L2-206ENST00000464626 ARHGEF12Q9NZN5 1544 aa31.54■■■□□ 2.64
MCF2L2-206ENST00000464626 ABCC1P33527 1531 aa31.53■■■□□ 2.64
MCF2L2-206ENST00000464626 CDC42BPAQ5VT25 1732 aa31.52■■■□□ 2.64
MCF2L2-206ENST00000464626 MLH3Q9UHC1 1453 aa31.51■■■□□ 2.63
MCF2L2-206ENST00000464626 MLECQ14165 292 aa31.5■■■□□ 2.63
MCF2L2-206ENST00000464626 REREQ9P2R6 1566 aa31.49■■■□□ 2.63
MCF2L2-206ENST00000464626 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
MCF2L2-206ENST00000464626 DIP2CQ9Y2E4 1556 aa31.48■■■□□ 2.63
MCF2L2-206ENST00000464626 TRAPPC8Q9Y2L5 1435 aa31.46■■■□□ 2.63
MCF2L2-206ENST00000464626 ABCA6Q8N139 1617 aa31.42■■■□□ 2.62
MCF2L2-206ENST00000464626 GPATCH8Q9UKJ3 1502 aaKnown RBP31.41■■■□□ 2.62
MCF2L2-206ENST00000464626 MYT1LQ9UL68 1186 aa31.4■■■□□ 2.62
MCF2L2-206ENST00000464626 AGLP35573 1532 aa31.38■■■□□ 2.61
MCF2L2-206ENST00000464626 PLPPR3Q6T4P5 718 aa31.37■■■□□ 2.61
MCF2L2-206ENST00000464626 SAMD9LQ8IVG5 1584 aa31.37■■■□□ 2.61
MCF2L2-206ENST00000464626 KIDINS220Q9ULH0 1771 aa31.37■■■□□ 2.61
MCF2L2-206ENST00000464626 HSPA2P54652 639 aa31.31■■■□□ 2.6
MCF2L2-206ENST00000464626 KIAA1107Q9UPP5 1409 aa31.31■■■□□ 2.6
MCF2L2-206ENST00000464626 MTUS2Q5JR59 1369 aa31.3■■■□□ 2.6
MCF2L2-206ENST00000464626 SYCP2Q9BX26 1530 aa31.3■■■□□ 2.6
MCF2L2-206ENST00000464626 ZNF777Q9ULD5 760 aaPredicted RBP31.3■■■□□ 2.6
MCF2L2-206ENST00000464626 PLEKHH2Q8IVE3 1493 aa31.29■■■□□ 2.6
MCF2L2-206ENST00000464626 CEP162Q5TB80 1403 aa31.29■■■□□ 2.6
MCF2L2-206ENST00000464626 CCNB3Q8WWL7 1395 aa31.29■■■□□ 2.6
MCF2L2-206ENST00000464626 PREX1Q8TCU6 1659 aa31.29■■■□□ 2.6
MCF2L2-206ENST00000464626 SETD1BQ9UPS6 1966 aaKnown RBP31.27■■■□□ 2.6
MCF2L2-206ENST00000464626 CFDP1Q9UEE9 299 aaPredicted RBP31.27■■■□□ 2.6
MCF2L2-206ENST00000464626 CEBPAP49715 358 aaPredicted RBP31.25■■■□□ 2.59
MCF2L2-206ENST00000464626 EHBP1L1Q8N3D4 1523 aa31.24■■■□□ 2.59
MCF2L2-206ENST00000464626 HNRNPMP52272 730 aaKnown RBP eCLIP31.23■■■□□ 2.59
MCF2L2-206ENST00000464626 SPAG9O60271 1321 aaKnown RBP31.23■■■□□ 2.59
MCF2L2-206ENST00000464626 FBXO41Q8TF61 875 aa31.21■■■□□ 2.59
MCF2L2-206ENST00000464626 TIAM1Q13009 1591 aa31.19■■■□□ 2.58
MCF2L2-206ENST00000464626 C3P01024 1663 aa31.19■■■□□ 2.58
MCF2L2-206ENST00000464626 INO80Q9ULG1 1556 aaPredicted RBP31.18■■■□□ 2.58
MCF2L2-206ENST00000464626 ATP7AQ04656 1500 aa31.18■■■□□ 2.58
MCF2L2-206ENST00000464626 CNTLNQ9NXG0 1405 aa31.17■■■□□ 2.58
MCF2L2-206ENST00000464626 ESF1Q9H501 851 aaKnown RBP31.16■■■□□ 2.58
MCF2L2-206ENST00000464626 UHRF1BP1Q6BDS2 1440 aa31.15■■■□□ 2.58
MCF2L2-206ENST00000464626 PLXNC1O60486 1568 aa31.12■■■□□ 2.57
MCF2L2-206ENST00000464626 MBD5Q9P267 1494 aa31.09■■■□□ 2.57
MCF2L2-206ENST00000464626 SUPT6HQ7KZ85 1726 aaKnown RBP31.09■■■□□ 2.57
MCF2L2-206ENST00000464626 MROH2AA6NES4 1674 aa31.09■■■□□ 2.57
MCF2L2-206ENST00000464626 A2MP01023 1474 aa31.08■■■□□ 2.57
MCF2L2-206ENST00000464626 ZNF644Q9H582 1327 aaPredicted RBP31.07■■■□□ 2.56
MCF2L2-206ENST00000464626 STRCQ7RTU9 1775 aa31.05■■■□□ 2.56
MCF2L2-206ENST00000464626 ADGBQ8N7X0 1667 aa31.04■■■□□ 2.56
MCF2L2-206ENST00000464626 NCOA2Q15596 1464 aa31.03■■■□□ 2.56
MCF2L2-206ENST00000464626 RTEL1-TNFRSF6BF6WH68 1400 aa31.03■■■□□ 2.56
MCF2L2-206ENST00000464626 NPATQ14207 1427 aa31.01■■■□□ 2.55
MCF2L2-206ENST00000464626 DMRT2Q9Y5R5 561 aa31.01■■■□□ 2.55
MCF2L2-206ENST00000464626 VPS8Q8N3P4 1428 aa30.99■■■□□ 2.55
MCF2L2-206ENST00000464626 ZMYM3Q14202 1370 aa30.99■■■□□ 2.55
MCF2L2-206ENST00000464626 LOC105371045A0A1W2PR82 267 aa30.97■■■□□ 2.55
MCF2L2-206ENST00000464626 PPP6R1Q9UPN7 881 aa30.96■■■□□ 2.55
MCF2L2-206ENST00000464626 CLTCQ00610 1675 aaKnown RBP30.95■■■□□ 2.55
MCF2L2-206ENST00000464626 RSPH4AQ5TD94 716 aa30.94■■■□□ 2.54
MCF2L2-206ENST00000464626 CERKQ8TCT0 537 aa30.94■■■□□ 2.54
MCF2L2-206ENST00000464626 CAMSAP2Q08AD1 1489 aa30.94■■■□□ 2.54
MCF2L2-206ENST00000464626 CCDC141Q6ZP82 1450 aa30.94■■■□□ 2.54
MCF2L2-206ENST00000464626 PTPRTO14522 1441 aa30.91■■■□□ 2.54
MCF2L2-206ENST00000464626 LRRC9Q6ZRR7 1453 aa30.91■■■□□ 2.54
MCF2L2-206ENST00000464626 DHX29Q7Z478 1369 aaKnown RBP30.91■■■□□ 2.54
MCF2L2-206ENST00000464626 GGT6Q6P531 493 aa30.9■■■□□ 2.54
MCF2L2-206ENST00000464626 MAP3K1Q13233 1512 aa30.89■■■□□ 2.54
MCF2L2-206ENST00000464626 NCOA1Q15788 1441 aa30.87■■■□□ 2.53
MCF2L2-206ENST00000464626 ARHGEF5Q12774 1597 aa30.87■■■□□ 2.53
MCF2L2-206ENST00000464626 PTPRKQ15262 1439 aa30.86■■■□□ 2.53
MCF2L2-206ENST00000464626 ZNF142P52746 1687 aaPredicted RBP30.81■■■□□ 2.52
MCF2L2-206ENST00000464626 MYO3AQ8NEV4 1616 aa30.8■■■□□ 2.52
MCF2L2-206ENST00000464626 FAM135AQ9P2D6 1515 aa30.8■■■□□ 2.52
MCF2L2-206ENST00000464626 CAMSAP1Q5T5Y3 1602 aa30.8■■■□□ 2.52
MCF2L2-206ENST00000464626 TSPY4P0CV99 314 aa30.76■■■□□ 2.51
MCF2L2-206ENST00000464626 TSPY10P0CW01 314 aa30.76■■■□□ 2.51
MCF2L2-206ENST00000464626 KANK4Q5T7N3 995 aaPredicted RBP30.76■■■□□ 2.51
MCF2L2-206ENST00000464626 CEP170BQ9Y4F5 1589 aaPredicted RBP30.75■■■□□ 2.51
MCF2L2-206ENST00000464626 KIF3BO15066 747 aa30.75■■■□□ 2.51
MCF2L2-206ENST00000464626 PLA2R1Q13018 1463 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms