RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
GARNL3-213ENST00000464616 TMC2Q8TDI7 906 aa9.42□□□□□ -0.9
GARNL3-213ENST00000464616 RYDENQ9NUL5 291 aaKnown RBP9.42□□□□□ -0.9
GARNL3-213ENST00000464616 TMEM92Q6UXU6 159 aa9.4□□□□□ -0.9
GARNL3-213ENST00000464616 HOXB3P14651 431 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-213ENST00000464616 ERBB3P21860 1342 aa9.38□□□□□ -0.91
GARNL3-213ENST00000464616 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-213ENST00000464616 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
GARNL3-213ENST00000464616 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
GARNL3-213ENST00000464616 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
GARNL3-213ENST00000464616 PPP1R37O75864 691 aa9.34□□□□□ -0.91
GARNL3-213ENST00000464616 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
GARNL3-213ENST00000464616 VARS2Q5ST30 1063 aaKnown RBP9.29□□□□□ -0.92
GARNL3-213ENST00000464616 KIF3CO14782 793 aa9.27□□□□□ -0.93
GARNL3-213ENST00000464616 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
GARNL3-213ENST00000464616 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
GARNL3-213ENST00000464616 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-213ENST00000464616 POTEB3A0JP26 581 aa9.23□□□□□ -0.93
GARNL3-213ENST00000464616 POTEBQ6S5H4 581 aa9.23□□□□□ -0.93
GARNL3-213ENST00000464616 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-213ENST00000464616 TBC1D12O60347 775 aa9.22□□□□□ -0.93
GARNL3-213ENST00000464616 NUDT7P0C024 238 aa9.22□□□□□ -0.93
GARNL3-213ENST00000464616 AMER1Q5JTC6 1135 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-213ENST00000464616 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
GARNL3-213ENST00000464616 KHSRPQ92945 711 aaKnown RBP eCLIP9.22□□□□□ -0.93
GARNL3-213ENST00000464616 GPHNQ9NQX3 736 aaPredicted RBP9.22□□□□□ -0.93
GARNL3-213ENST00000464616 PCDHGA4Q9Y5G9 962 aa9.22□□□□□ -0.93
GARNL3-213ENST00000464616 SPNS2Q8IVW8 549 aa9.21□□□□□ -0.94
GARNL3-213ENST00000464616 SLC34A2O95436 690 aa9.2□□□□□ -0.94
GARNL3-213ENST00000464616 FOXK1P85037 733 aa9.2□□□□□ -0.94
GARNL3-213ENST00000464616 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
GARNL3-213ENST00000464616 PDE4AP27815 886 aa9.19□□□□□ -0.94
GARNL3-213ENST00000464616 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
GARNL3-213ENST00000464616 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
GARNL3-213ENST00000464616 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-213ENST00000464616 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
GARNL3-213ENST00000464616 DSG2Q14126 1118 aa9.17□□□□□ -0.94
GARNL3-213ENST00000464616 LHX6Q9UPM6 363 aa9.15□□□□□ -0.94
GARNL3-213ENST00000464616 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-213ENST00000464616 PPP1R15BQ5SWA1 713 aa9.13□□□□□ -0.95
GARNL3-213ENST00000464616 ANKRD13DQ6ZTN6 518 aa9.13□□□□□ -0.95
GARNL3-213ENST00000464616 PTCD2Q8WV60 388 aaKnown RBP9.13□□□□□ -0.95
GARNL3-213ENST00000464616 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-213ENST00000464616 UPF1Q92900 1129 aaKnown RBP eCLIP9.12□□□□□ -0.95
GARNL3-213ENST00000464616 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-213ENST00000464616 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
GARNL3-213ENST00000464616 PBX2P40425 430 aa9.1□□□□□ -0.95
GARNL3-213ENST00000464616 DDX27Q96GQ7 796 aaKnown RBP9.1□□□□□ -0.95
GARNL3-213ENST00000464616 KCNH8Q96L42 1107 aa9.1□□□□□ -0.95
GARNL3-213ENST00000464616 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
GARNL3-213ENST00000464616 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
GARNL3-213ENST00000464616 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
GARNL3-213ENST00000464616 PTGER2P43116 358 aa9.06□□□□□ -0.96
GARNL3-213ENST00000464616 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
GARNL3-213ENST00000464616 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
GARNL3-213ENST00000464616 LSM11P83369 360 aaKnown RBP eCLIP9.05□□□□□ -0.96
GARNL3-213ENST00000464616 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
GARNL3-213ENST00000464616 RNF166Q96A37 237 aaPredicted RBP9.05□□□□□ -0.96
GARNL3-213ENST00000464616 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
GARNL3-213ENST00000464616 MAP3K9P80192 1104 aa9.04□□□□□ -0.96
GARNL3-213ENST00000464616 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
GARNL3-213ENST00000464616 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
GARNL3-213ENST00000464616 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
GARNL3-213ENST00000464616 CFAP44Q96MT7 982 aa9.02□□□□□ -0.97
GARNL3-213ENST00000464616 ZNF454Q8N9F8 522 aa9.01□□□□□ -0.97
GARNL3-213ENST00000464616 PAXIP1Q6ZW49 1069 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-213ENST00000464616 EVI5O60447 810 aa8.98□□□□□ -0.97
GARNL3-213ENST00000464616 MFSD10Q14728 455 aa8.97□□□□□ -0.97
GARNL3-213ENST00000464616 KDM4FA0A1W2PPD8 638 aa8.96□□□□□ -0.98
GARNL3-213ENST00000464616 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
GARNL3-213ENST00000464616 KCNK17Q96T54 332 aa8.96□□□□□ -0.98
GARNL3-213ENST00000464616 PSEN2P49810 448 aa8.95□□□□□ -0.98
GARNL3-213ENST00000464616 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
GARNL3-213ENST00000464616 WDR70Q9NW82 654 aa8.95□□□□□ -0.98
GARNL3-213ENST00000464616 PTPREP23469 700 aa8.93□□□□□ -0.98
GARNL3-213ENST00000464616 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
GARNL3-213ENST00000464616 TK2O00142 265 aa8.92□□□□□ -0.98
GARNL3-213ENST00000464616 ZDHHC16Q969W1 377 aa8.91□□□□□ -0.98
GARNL3-213ENST00000464616 JPH4Q96JJ6 628 aa8.91□□□□□ -0.98
GARNL3-213ENST00000464616 FOSBP53539 338 aa8.9□□□□□ -0.98
GARNL3-213ENST00000464616 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
GARNL3-213ENST00000464616 ANO8Q9HCE9 1232 aaPredicted RBP8.9□□□□□ -0.98
GARNL3-213ENST00000464616 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
GARNL3-213ENST00000464616 BCL2L12Q9HB09 334 aa8.89□□□□□ -0.99
GARNL3-213ENST00000464616 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
GARNL3-213ENST00000464616 DPYSL4O14531 572 aa8.87□□□□□ -0.99
GARNL3-213ENST00000464616 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
GARNL3-213ENST00000464616 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
GARNL3-213ENST00000464616 TYW1BQ6NUM6 668 aa8.84□□□□□ -0.99
GARNL3-213ENST00000464616 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
GARNL3-213ENST00000464616 PHF14O94880 888 aa8.83□□□□□ -1
GARNL3-213ENST00000464616 CAMK2BQ13554 666 aa8.83□□□□□ -1
GARNL3-213ENST00000464616 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
GARNL3-213ENST00000464616 VPS9D1Q9Y2B5 631 aa8.83□□□□□ -1
GARNL3-213ENST00000464616 E2F4Q16254 413 aa8.82□□□□□ -1
GARNL3-213ENST00000464616 EPAS1Q99814 870 aa8.82□□□□□ -1
GARNL3-213ENST00000464616 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
GARNL3-213ENST00000464616 MRPL50Q8N5N7 158 aaKnown RBP8.81□□□□□ -1
GARNL3-213ENST00000464616 NBPF3Q9H094 633 aa8.81□□□□□ -1
GARNL3-213ENST00000464616 HRO43593 1189 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms