RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
HMGXB4-205ENST00000464480 G3V3G9 751 aa8.27□□□□□ -1.09
HMGXB4-205ENST00000464480 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
HMGXB4-205ENST00000464480 CRISPLD2Q9H0B8 497 aa8.27□□□□□ -1.09
HMGXB4-205ENST00000464480 MFSD10Q14728 455 aa8.26□□□□□ -1.09
HMGXB4-205ENST00000464480 DDX27Q96GQ7 796 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-205ENST00000464480 L3MBTL3Q96JM7 780 aaPredicted RBP8.26□□□□□ -1.09
HMGXB4-205ENST00000464480 ARHGEF1Q92888 912 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-205ENST00000464480 POTEFA5A3E0 1075 aa8.24□□□□□ -1.09
HMGXB4-205ENST00000464480 PDCD7Q8N8D1 485 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-205ENST00000464480 MICALL2Q8IY33 904 aa8.23□□□□□ -1.09
HMGXB4-205ENST00000464480 POTEB2H3BUK9 544 aa8.22□□□□□ -1.09
HMGXB4-205ENST00000464480 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
HMGXB4-205ENST00000464480 DPY19L2Q6NUT2 758 aa8.22□□□□□ -1.09
HMGXB4-205ENST00000464480 C3orf67Q6ZVT6 689 aa8.2□□□□□ -1.1
HMGXB4-205ENST00000464480 GPHNQ9NQX3 736 aaPredicted RBP8.2□□□□□ -1.1
HMGXB4-205ENST00000464480 BOLA1Q9Y3E2 137 aa8.2□□□□□ -1.1
HMGXB4-205ENST00000464480 PPP1R15BQ5SWA1 713 aa8.19□□□□□ -1.1
HMGXB4-205ENST00000464480 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
HMGXB4-205ENST00000464480 OTUD5Q96G74 571 aa8.19□□□□□ -1.1
HMGXB4-205ENST00000464480 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-205ENST00000464480 CAMK2BQ13554 666 aa8.17□□□□□ -1.1
HMGXB4-205ENST00000464480 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-205ENST00000464480 POTEJP0CG39 1038 aa8.16□□□□□ -1.1
HMGXB4-205ENST00000464480 ARIH1Q9Y4X5 557 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-205ENST00000464480 LMOD2Q6P5Q4 547 aa8.14□□□□□ -1.11
HMGXB4-205ENST00000464480 FOXK1P85037 733 aa8.13□□□□□ -1.11
HMGXB4-205ENST00000464480 DSG2Q14126 1118 aa8.13□□□□□ -1.11
HMGXB4-205ENST00000464480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGXB4-205ENST00000464480 SLAIN1Q8ND83 568 aa8.13□□□□□ -1.11
HMGXB4-205ENST00000464480 SEMA3EO15041 775 aa8.12□□□□□ -1.11
HMGXB4-205ENST00000464480 TESPA1A2RU30 521 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-205ENST00000464480 SMYD5Q6GMV2 418 aa8.11□□□□□ -1.11
HMGXB4-205ENST00000464480 C2orf72A6NCS6 295 aa8.1□□□□□ -1.11
HMGXB4-205ENST00000464480 SNPHO15079 494 aa8.1□□□□□ -1.11
HMGXB4-205ENST00000464480 KIF3CO14782 793 aa8.09□□□□□ -1.11
HMGXB4-205ENST00000464480 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
HMGXB4-205ENST00000464480 DPYSL4O14531 572 aa8.07□□□□□ -1.12
HMGXB4-205ENST00000464480 EMILIN3Q9NT22 766 aa8.07□□□□□ -1.12
HMGXB4-205ENST00000464480 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-205ENST00000464480 PDIA6Q15084 440 aa8.05□□□□□ -1.12
HMGXB4-205ENST00000464480 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
HMGXB4-205ENST00000464480 MAP3K9P80192 1104 aa8.02□□□□□ -1.13
HMGXB4-205ENST00000464480 MLLT3P42568 568 aaPredicted RBP8□□□□□ -1.13
HMGXB4-205ENST00000464480 ZC3H15Q8WU90 426 aaKnown RBP8□□□□□ -1.13
HMGXB4-205ENST00000464480 UPF1Q92900 1129 aaKnown RBP eCLIP8□□□□□ -1.13
HMGXB4-205ENST00000464480 FAM163AQ96GL9 167 aaPredicted RBP8□□□□□ -1.13
HMGXB4-205ENST00000464480 ZNF316A6NFI3 1004 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-205ENST00000464480 OXER1Q8TDS5 423 aa7.98□□□□□ -1.13
HMGXB4-205ENST00000464480 RIMBP2O15034 1052 aa7.97□□□□□ -1.13
HMGXB4-205ENST00000464480 TBC1D12O60347 775 aa7.97□□□□□ -1.13
HMGXB4-205ENST00000464480 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
HMGXB4-205ENST00000464480 GPIHBP1Q8IV16 184 aa7.97□□□□□ -1.13
HMGXB4-205ENST00000464480 RBM26Q5T8P6 1007 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-205ENST00000464480 ZNF710Q8N1W2 664 aa7.95□□□□□ -1.14
HMGXB4-205ENST00000464480 SLC34A2O95436 690 aa7.93□□□□□ -1.14
HMGXB4-205ENST00000464480 PTCD2Q8WV60 388 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-205ENST00000464480 GRXCR2A6NFK2 248 aa7.92□□□□□ -1.14
HMGXB4-205ENST00000464480 ZMYND10O75800 440 aa7.92□□□□□ -1.14
HMGXB4-205ENST00000464480 EVI5O60447 810 aa7.91□□□□□ -1.14
HMGXB4-205ENST00000464480 PTGER2P43116 358 aa7.91□□□□□ -1.14
HMGXB4-205ENST00000464480 ST18O60284 1047 aa7.9□□□□□ -1.14
HMGXB4-205ENST00000464480 ZSWIM6Q9HCJ5 1215 aa7.9□□□□□ -1.14
HMGXB4-205ENST00000464480 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
HMGXB4-205ENST00000464480 DDX12PQ92771 950 aa7.89□□□□□ -1.15
HMGXB4-205ENST00000464480 SLC24A3Q9HC58 644 aa7.89□□□□□ -1.15
HMGXB4-205ENST00000464480 POTEMA6NI47 508 aa7.88□□□□□ -1.15
HMGXB4-205ENST00000464480 POTEGQ6S5H5 508 aa7.88□□□□□ -1.15
HMGXB4-205ENST00000464480 NUTM2FA1L443 756 aa7.86□□□□□ -1.15
HMGXB4-205ENST00000464480 HOXB3P14651 431 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-205ENST00000464480 OSBPP22059 807 aa7.86□□□□□ -1.15
HMGXB4-205ENST00000464480 KRI1Q8N9T8 703 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-205ENST00000464480 PCDHGA4Q9Y5G9 962 aa7.86□□□□□ -1.15
HMGXB4-205ENST00000464480 EMP3P54852 163 aa7.85□□□□□ -1.15
HMGXB4-205ENST00000464480 ANO8Q9HCE9 1232 aaPredicted RBP7.85□□□□□ -1.15
HMGXB4-205ENST00000464480 PCDH10Q9P2E7 1040 aa7.85□□□□□ -1.15
HMGXB4-205ENST00000464480 AK7Q96M32 723 aa7.84□□□□□ -1.15
HMGXB4-205ENST00000464480 GPR37O15354 613 aa7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 PHF14O94880 888 aa7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 HOXB1P14653 301 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 BRPF1P55201 1214 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 NEUROD2Q15784 382 aa7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 EPAS1Q99814 870 aa7.83□□□□□ -1.16
HMGXB4-205ENST00000464480 FCHSD2O94868 740 aa7.82□□□□□ -1.16
HMGXB4-205ENST00000464480 HIC1Q14526 733 aa7.81□□□□□ -1.16
HMGXB4-205ENST00000464480 TMEM132AQ24JP5 1023 aa7.81□□□□□ -1.16
HMGXB4-205ENST00000464480 MARVELD3Q96A59 401 aa7.81□□□□□ -1.16
HMGXB4-205ENST00000464480 GNPATO15228 680 aa7.8□□□□□ -1.16
HMGXB4-205ENST00000464480 EN1Q05925 392 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-205ENST00000464480 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
HMGXB4-205ENST00000464480 MAP3K7O43318 606 aa7.79□□□□□ -1.16
HMGXB4-205ENST00000464480 MAP2K5Q13163 448 aa7.79□□□□□ -1.16
HMGXB4-205ENST00000464480 TYW1BQ6NUM6 668 aa7.79□□□□□ -1.16
HMGXB4-205ENST00000464480 FBXW7Q969H0 707 aa7.79□□□□□ -1.16
HMGXB4-205ENST00000464480 MINK1Q8N4C8 1332 aaPredicted RBP7.78□□□□□ -1.16
HMGXB4-205ENST00000464480 ERBB3P21860 1342 aa7.78□□□□□ -1.16
HMGXB4-205ENST00000464480 PRIM1P49642 420 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-205ENST00000464480 PTGDRQ13258 359 aa7.77□□□□□ -1.17
HMGXB4-205ENST00000464480 GPR153Q6NV75 609 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms