RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
PTPN12-210ENST00000464313 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
PTPN12-210ENST00000464313 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
PTPN12-210ENST00000464313 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
PTPN12-210ENST00000464313 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
PTPN12-210ENST00000464313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
PTPN12-210ENST00000464313 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
PTPN12-210ENST00000464313 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.541e-8■■■■□ 21.4
PTPN12-210ENST00000464313 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
PTPN12-210ENST00000464313 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
PTPN12-210ENST00000464313 PHF8Q9UPP1 1060 aa11.63□□□□□ -0.55
PTPN12-210ENST00000464313 PBX2P40425 430 aa11.62□□□□□ -0.55
PTPN12-210ENST00000464313 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
PTPN12-210ENST00000464313 SOX12O15370 315 aa11.61□□□□□ -0.55
PTPN12-210ENST00000464313 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
PTPN12-210ENST00000464313 AXIN2Q9Y2T1 843 aa11.57□□□□□ -0.56
PTPN12-210ENST00000464313 NUDT7P0C024 238 aa11.52□□□□□ -0.57
PTPN12-210ENST00000464313 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-210ENST00000464313 ADGRD1Q6QNK2 874 aa11.49□□□□□ -0.57
PTPN12-210ENST00000464313 LHX6Q9UPM6 363 aa11.49□□□□□ -0.57
PTPN12-210ENST00000464313 NLRP6P59044 892 aa11.48□□□□□ -0.57
PTPN12-210ENST00000464313 FBXO22Q8NEZ5 403 aa11.48□□□□□ -0.57
PTPN12-210ENST00000464313 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
PTPN12-210ENST00000464313 MFRPQ9BY79 579 aa11.43□□□□□ -0.58
PTPN12-210ENST00000464313 ARHGAP33O14559 1287 aa11.42□□□□□ -0.58
PTPN12-210ENST00000464313 STK25O00506 426 aa11.41□□□□□ -0.58
PTPN12-210ENST00000464313 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
PTPN12-210ENST00000464313 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.58
PTPN12-210ENST00000464313 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
PTPN12-210ENST00000464313 PCDHGA4Q9Y5G9 962 aa11.4□□□□□ -0.58
PTPN12-210ENST00000464313 KIF3CO14782 793 aa11.38□□□□□ -0.59
PTPN12-210ENST00000464313 HRO43593 1189 aa11.38□□□□□ -0.59
PTPN12-210ENST00000464313 RGS20O76081 388 aa11.38□□□□□ -0.59
PTPN12-210ENST00000464313 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
PTPN12-210ENST00000464313 TK2O00142 265 aa11.37□□□□□ -0.59
PTPN12-210ENST00000464313 SLC34A2O95436 690 aa11.36□□□□□ -0.59
PTPN12-210ENST00000464313 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
PTPN12-210ENST00000464313 RGL2O15211 777 aa11.34□□□□□ -0.59
PTPN12-210ENST00000464313 PSDA5PKW4 1024 aaPredicted RBP11.32□□□□□ -0.6
PTPN12-210ENST00000464313 PKD2Q13563 968 aa11.32□□□□□ -0.6
PTPN12-210ENST00000464313 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
PTPN12-210ENST00000464313 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
PTPN12-210ENST00000464313 PSEN2P49810 448 aa11.29□□□□□ -0.6
PTPN12-210ENST00000464313 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
PTPN12-210ENST00000464313 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
PTPN12-210ENST00000464313 PPP1R37O75864 691 aa11.25□□□□□ -0.61
PTPN12-210ENST00000464313 PTPN5P54829 565 aa11.25□□□□□ -0.61
PTPN12-210ENST00000464313 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
PTPN12-210ENST00000464313 A0A0G2JS52 829 aa11.22□□□□□ -0.61
PTPN12-210ENST00000464313 AMER1Q5JTC6 1135 aaPredicted RBP11.21□□□□□ -0.61
PTPN12-210ENST00000464313 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
PTPN12-210ENST00000464313 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
PTPN12-210ENST00000464313 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
PTPN12-210ENST00000464313 Q6ZNB5 142 aa11.12□□□□□ -0.63
PTPN12-210ENST00000464313 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
PTPN12-210ENST00000464313 KCNK17Q96T54 332 aa11.12□□□□□ -0.63
PTPN12-210ENST00000464313 VPS9D1Q9Y2B5 631 aa11.12□□□□□ -0.63
PTPN12-210ENST00000464313 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
PTPN12-210ENST00000464313 PLPP6Q8IY26 295 aa11.08□□□□□ -0.64
PTPN12-210ENST00000464313 FOXK1P85037 733 aa11.06□□□□□ -0.64
PTPN12-210ENST00000464313 HS6ST3Q8IZP7 471 aa11.05□□□□□ -0.64
PTPN12-210ENST00000464313 DSG2Q14126 1118 aa11.04□□□□□ -0.64
PTPN12-210ENST00000464313 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
PTPN12-210ENST00000464313 GOLGA8CPA6NN73 597 aa11.02□□□□□ -0.65
PTPN12-210ENST00000464313 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
PTPN12-210ENST00000464313 WNT2BQ93097 391 aa11.02□□□□□ -0.65
PTPN12-210ENST00000464313 SLC4A5Q9BY07 1137 aa11.02□□□□□ -0.65
PTPN12-210ENST00000464313 TBC1D12O60347 775 aa11.01□□□□□ -0.65
PTPN12-210ENST00000464313 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
PTPN12-210ENST00000464313 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
PTPN12-210ENST00000464313 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
PTPN12-210ENST00000464313 UPF1Q92900 1129 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTPN12-210ENST00000464313 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
PTPN12-210ENST00000464313 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-210ENST00000464313 ZNF454Q8N9F8 522 aa10.92□□□□□ -0.66
PTPN12-210ENST00000464313 OXER1Q8TDS5 423 aa10.91□□□□□ -0.66
PTPN12-210ENST00000464313 ZBED2Q9BTP6 218 aa10.91□□□□□ -0.66
PTPN12-210ENST00000464313 LCE2BO14633 110 aa10.89□□□□□ -0.67
PTPN12-210ENST00000464313 PTPREP23469 700 aa10.89□□□□□ -0.67
PTPN12-210ENST00000464313 LAPTM4AQ15012 233 aa10.89□□□□□ -0.67
PTPN12-210ENST00000464313 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
PTPN12-210ENST00000464313 CRISPLD2Q9H0B8 497 aa10.88□□□□□ -0.67
PTPN12-210ENST00000464313 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
PTPN12-210ENST00000464313 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
PTPN12-210ENST00000464313 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
PTPN12-210ENST00000464313 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
PTPN12-210ENST00000464313 FOSBP53539 338 aa10.82□□□□□ -0.68
PTPN12-210ENST00000464313 GFRA3O60609 400 aa10.81□□□□□ -0.68
PTPN12-210ENST00000464313 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
PTPN12-210ENST00000464313 KCNC4Q03721 635 aa10.79□□□□□ -0.68
PTPN12-210ENST00000464313 ANKK1Q8NFD2 765 aa10.79□□□□□ -0.68
PTPN12-210ENST00000464313 PDE4AP27815 886 aa10.78□□□□□ -0.68
PTPN12-210ENST00000464313 EVI5O60447 810 aa10.76□□□□□ -0.69
PTPN12-210ENST00000464313 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
PTPN12-210ENST00000464313 BCAMP50895 628 aa10.75□□□□□ -0.69
PTPN12-210ENST00000464313 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
PTPN12-210ENST00000464313 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
PTPN12-210ENST00000464313 ANO8Q9HCE9 1232 aaPredicted RBP10.75□□□□□ -0.69
PTPN12-210ENST00000464313 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
PTPN12-210ENST00000464313 DCAF8L2P0C7V8 631 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms