RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 HS6ST3Q8IZP7 471 aa10.74□□□□□ -0.69
USP9X-204ENST00000463829 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
USP9X-204ENST00000463829 STK25O00506 426 aa10.72□□□□□ -0.69
USP9X-204ENST00000463829 FAM205CA6NFA0 338 aa10.71□□□□□ -0.69
USP9X-204ENST00000463829 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
USP9X-204ENST00000463829 MS4A4AQ96JQ5 239 aa10.7□□□□□ -0.7
USP9X-204ENST00000463829 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
USP9X-204ENST00000463829 HOXB1P14653 301 aaPredicted RBP10.67□□□□□ -0.7
USP9X-204ENST00000463829 DNAJC5Q9H3Z4 198 aa10.67□□□□□ -0.7
USP9X-204ENST00000463829 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
USP9X-204ENST00000463829 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
USP9X-204ENST00000463829 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
USP9X-204ENST00000463829 ERBB3P21860 1342 aa10.63□□□□□ -0.71
USP9X-204ENST00000463829 TMEM92Q6UXU6 159 aa10.63□□□□□ -0.71
USP9X-204ENST00000463829 SPNS2Q8IVW8 549 aa10.63□□□□□ -0.71
USP9X-204ENST00000463829 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
USP9X-204ENST00000463829 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
USP9X-204ENST00000463829 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
USP9X-204ENST00000463829 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
USP9X-204ENST00000463829 POTEB3A0JP26 581 aa10.59□□□□□ -0.71
USP9X-204ENST00000463829 POTEBQ6S5H4 581 aa10.59□□□□□ -0.71
USP9X-204ENST00000463829 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
USP9X-204ENST00000463829 NKX1-1Q15270 411 aaPredicted RBP10.56□□□□□ -0.72
USP9X-204ENST00000463829 KRTAP3-3Q9BYR6 98 aa10.54□□□□□ -0.72
USP9X-204ENST00000463829 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
USP9X-204ENST00000463829 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
USP9X-204ENST00000463829 GPR153Q6NV75 609 aa10.52□□□□□ -0.73
USP9X-204ENST00000463829 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
USP9X-204ENST00000463829 GTPBP6O43824 516 aaPredicted RBP10.51□□□□□ -0.73
USP9X-204ENST00000463829 ARSIQ5FYB1 569 aa10.5□□□□□ -0.73
USP9X-204ENST00000463829 TMC2Q8TDI7 906 aa10.5□□□□□ -0.73
USP9X-204ENST00000463829 C2orf72A6NCS6 295 aa10.48□□□□□ -0.73
USP9X-204ENST00000463829 VSIG10Q8N0Z9 540 aa10.48□□□□□ -0.73
USP9X-204ENST00000463829 ZNF687Q8N1G0 1237 aa10.46□□□□□ -0.73
USP9X-204ENST00000463829 KIF3CO14782 793 aa10.45□□□□□ -0.74
USP9X-204ENST00000463829 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
USP9X-204ENST00000463829 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
USP9X-204ENST00000463829 PPP1R37O75864 691 aa10.42□□□□□ -0.74
USP9X-204ENST00000463829 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP9X-204ENST00000463829 SLC34A2O95436 690 aa10.39□□□□□ -0.75
USP9X-204ENST00000463829 NUDT7P0C024 238 aa10.37□□□□□ -0.75
USP9X-204ENST00000463829 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
USP9X-204ENST00000463829 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
USP9X-204ENST00000463829 PTGER2P43116 358 aa10.34□□□□□ -0.75
USP9X-204ENST00000463829 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
USP9X-204ENST00000463829 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
USP9X-204ENST00000463829 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
USP9X-204ENST00000463829 LHX6Q9UPM6 363 aa10.32□□□□□ -0.76
USP9X-204ENST00000463829 TBC1D12O60347 775 aa10.31□□□□□ -0.76
USP9X-204ENST00000463829 PBX2P40425 430 aa10.31□□□□□ -0.76
USP9X-204ENST00000463829 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
USP9X-204ENST00000463829 PSDA5PKW4 1024 aaPredicted RBP10.3□□□□□ -0.76
USP9X-204ENST00000463829 FOXK1P85037 733 aa10.3□□□□□ -0.76
USP9X-204ENST00000463829 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
USP9X-204ENST00000463829 LSM11P83369 360 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP9X-204ENST00000463829 PTCD2Q8WV60 388 aaKnown RBP10.27□□□□□ -0.77
USP9X-204ENST00000463829 DSG2Q14126 1118 aa10.24□□□□□ -0.77
USP9X-204ENST00000463829 ARHGAP33O14559 1287 aa10.21□□□□□ -0.77
USP9X-204ENST00000463829 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
USP9X-204ENST00000463829 PDE4AP27815 886 aa10.2□□□□□ -0.78
USP9X-204ENST00000463829 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
USP9X-204ENST00000463829 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
USP9X-204ENST00000463829 KCNH8Q96L42 1107 aa10.18□□□□□ -0.78
USP9X-204ENST00000463829 BCANQ96GW7 911 aa10.17□□□□□ -0.78
USP9X-204ENST00000463829 KDM4FA0A1W2PPD8 638 aa10.16□□□□□ -0.78
USP9X-204ENST00000463829 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
USP9X-204ENST00000463829 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
USP9X-204ENST00000463829 PPP1R15BQ5SWA1 713 aa10.15□□□□□ -0.78
USP9X-204ENST00000463829 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP9X-204ENST00000463829 CRISPLD2Q9H0B8 497 aa10.15□□□□□ -0.78
USP9X-204ENST00000463829 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
USP9X-204ENST00000463829 ADGRD1Q6QNK2 874 aa10.13□□□□□ -0.79
USP9X-204ENST00000463829 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
USP9X-204ENST00000463829 TK2O00142 265 aa10.11□□□□□ -0.79
USP9X-204ENST00000463829 PSEN2P49810 448 aa10.1□□□□□ -0.79
USP9X-204ENST00000463829 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
USP9X-204ENST00000463829 ZNF454Q8N9F8 522 aa10.08□□□□□ -0.8
USP9X-204ENST00000463829 DDX27Q96GQ7 796 aaKnown RBP10.08□□□□□ -0.8
USP9X-204ENST00000463829 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
USP9X-204ENST00000463829 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
USP9X-204ENST00000463829 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
USP9X-204ENST00000463829 KCNK17Q96T54 332 aa10.07□□□□□ -0.8
USP9X-204ENST00000463829 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
USP9X-204ENST00000463829 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
USP9X-204ENST00000463829 NBR1Q14596 966 aa10.04□□□□□ -0.8
USP9X-204ENST00000463829 HRO43593 1189 aa10.02□□□□□ -0.81
USP9X-204ENST00000463829 EVI5O60447 810 aa10.02□□□□□ -0.81
USP9X-204ENST00000463829 MFSD10Q14728 455 aa10.02□□□□□ -0.81
USP9X-204ENST00000463829 PTPREP23469 700 aa10.01□□□□□ -0.81
USP9X-204ENST00000463829 FOSBP53539 338 aa10.01□□□□□ -0.81
USP9X-204ENST00000463829 E2F4Q16254 413 aa10.01□□□□□ -0.81
USP9X-204ENST00000463829 BCL2L12Q9HB09 334 aa10.01□□□□□ -0.81
USP9X-204ENST00000463829 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
USP9X-204ENST00000463829 KCNV2Q8TDN2 545 aa9.99□□□□□ -0.81
USP9X-204ENST00000463829 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
USP9X-204ENST00000463829 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
USP9X-204ENST00000463829 KCTD12Q96CX2 325 aaKnown RBP9.98□□□□□ -0.81
USP9X-204ENST00000463829 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
USP9X-204ENST00000463829 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
USP9X-204ENST00000463829 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms