RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
TM9SF2-202ENST00000463709 PHF8Q9UPP1 1060 aa12.1□□□□□ -0.47
TM9SF2-202ENST00000463709 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.09□□□□□ -0.47
TM9SF2-202ENST00000463709 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
TM9SF2-202ENST00000463709 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
TM9SF2-202ENST00000463709 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
TM9SF2-202ENST00000463709 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
TM9SF2-202ENST00000463709 DOK7Q18PE1 504 aa12.06□□□□□ -0.48
TM9SF2-202ENST00000463709 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
TM9SF2-202ENST00000463709 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
TM9SF2-202ENST00000463709 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
TM9SF2-202ENST00000463709 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
TM9SF2-202ENST00000463709 HOXB1P14653 301 aaPredicted RBP12.03□□□□□ -0.48
TM9SF2-202ENST00000463709 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
TM9SF2-202ENST00000463709 NLRP6P59044 892 aa12.03□□□□□ -0.48
TM9SF2-202ENST00000463709 FBXO22Q8NEZ5 403 aa12.01□□□□□ -0.49
TM9SF2-202ENST00000463709 RIMBP2O15034 1052 aa12□□□□□ -0.49
TM9SF2-202ENST00000463709 MMRN1Q13201 1228 aa12□□□□□ -0.49
TM9SF2-202ENST00000463709 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
TM9SF2-202ENST00000463709 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
TM9SF2-202ENST00000463709 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
TM9SF2-202ENST00000463709 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
TM9SF2-202ENST00000463709 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
TM9SF2-202ENST00000463709 ERBB3P21860 1342 aa11.93□□□□□ -0.5
TM9SF2-202ENST00000463709 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
TM9SF2-202ENST00000463709 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
TM9SF2-202ENST00000463709 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
TM9SF2-202ENST00000463709 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
TM9SF2-202ENST00000463709 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
TM9SF2-202ENST00000463709 KIF3CO14782 793 aa11.83□□□□□ -0.52
TM9SF2-202ENST00000463709 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
TM9SF2-202ENST00000463709 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
TM9SF2-202ENST00000463709 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
TM9SF2-202ENST00000463709 PPP1R37O75864 691 aa11.78□□□□□ -0.52
TM9SF2-202ENST00000463709 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
TM9SF2-202ENST00000463709 KHSRPQ92945 711 aaKnown RBP eCLIP11.76□□□□□ -0.534e-8■■□□□ 14.2
TM9SF2-202ENST00000463709 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
TM9SF2-202ENST00000463709 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
TM9SF2-202ENST00000463709 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
TM9SF2-202ENST00000463709 SLC34A2O95436 690 aa11.7□□□□□ -0.54
TM9SF2-202ENST00000463709 VSIG10Q8N0Z9 540 aa11.7□□□□□ -0.54
TM9SF2-202ENST00000463709 CADPS2Q86UW7 1296 aa11.69□□□□□ -0.54
TM9SF2-202ENST00000463709 NUDT7P0C024 238 aa11.68□□□□□ -0.54
TM9SF2-202ENST00000463709 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
TM9SF2-202ENST00000463709 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
TM9SF2-202ENST00000463709 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
TM9SF2-202ENST00000463709 LHX6Q9UPM6 363 aa11.62□□□□□ -0.55
TM9SF2-202ENST00000463709 PTGER2P43116 358 aa11.61□□□□□ -0.55
TM9SF2-202ENST00000463709 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
TM9SF2-202ENST00000463709 LSM11P83369 360 aaKnown RBP eCLIP11.58□□□□□ -0.56
TM9SF2-202ENST00000463709 FOXK1P85037 733 aa11.58□□□□□ -0.56
TM9SF2-202ENST00000463709 PBX2P40425 430 aa11.57□□□□□ -0.56
TM9SF2-202ENST00000463709 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
TM9SF2-202ENST00000463709 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
TM9SF2-202ENST00000463709 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
TM9SF2-202ENST00000463709 PLPP6Q8IY26 295 aa11.55□□□□□ -0.56
TM9SF2-202ENST00000463709 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
TM9SF2-202ENST00000463709 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
TM9SF2-202ENST00000463709 DSG2Q14126 1118 aa11.52□□□□□ -0.57
TM9SF2-202ENST00000463709 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
TM9SF2-202ENST00000463709 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
TM9SF2-202ENST00000463709 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
TM9SF2-202ENST00000463709 TBC1D12O60347 775 aa11.46□□□□□ -0.57
TM9SF2-202ENST00000463709 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
TM9SF2-202ENST00000463709 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
TM9SF2-202ENST00000463709 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
TM9SF2-202ENST00000463709 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
TM9SF2-202ENST00000463709 ADGRD1Q6QNK2 874 aa11.42□□□□□ -0.58
TM9SF2-202ENST00000463709 PDE4AP27815 886 aa11.4□□□□□ -0.58
TM9SF2-202ENST00000463709 OXER1Q8TDS5 423 aa11.4□□□□□ -0.58
TM9SF2-202ENST00000463709 PPP1R15BQ5SWA1 713 aa11.38□□□□□ -0.59
TM9SF2-202ENST00000463709 DMRTA1Q5VZB9 504 aa11.38□□□□□ -0.59
TM9SF2-202ENST00000463709 TK2O00142 265 aa11.37□□□□□ -0.59
TM9SF2-202ENST00000463709 PSEN2P49810 448 aa11.37□□□□□ -0.59
TM9SF2-202ENST00000463709 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
TM9SF2-202ENST00000463709 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
TM9SF2-202ENST00000463709 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
TM9SF2-202ENST00000463709 BCANQ96GW7 911 aa11.35□□□□□ -0.59
TM9SF2-202ENST00000463709 HRO43593 1189 aa11.33□□□□□ -0.6
TM9SF2-202ENST00000463709 MFSD10Q14728 455 aa11.33□□□□□ -0.6
TM9SF2-202ENST00000463709 E2F4Q16254 413 aa11.31□□□□□ -0.6
TM9SF2-202ENST00000463709 KCNK17Q96T54 332 aa11.31□□□□□ -0.6
TM9SF2-202ENST00000463709 KCNH8Q96L42 1107 aa11.3□□□□□ -0.6
TM9SF2-202ENST00000463709 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
TM9SF2-202ENST00000463709 NBR1Q14596 966 aa11.29□□□□□ -0.6
TM9SF2-202ENST00000463709 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
TM9SF2-202ENST00000463709 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
TM9SF2-202ENST00000463709 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
TM9SF2-202ENST00000463709 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
TM9SF2-202ENST00000463709 FOSBP53539 338 aa11.25□□□□□ -0.61
TM9SF2-202ENST00000463709 EVI5O60447 810 aa11.24□□□□□ -0.61
TM9SF2-202ENST00000463709 STAC3Q96MF2 364 aa11.24□□□□□ -0.61
TM9SF2-202ENST00000463709 VPS9D1Q9Y2B5 631 aa11.24□□□□□ -0.61
TM9SF2-202ENST00000463709 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
TM9SF2-202ENST00000463709 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
TM9SF2-202ENST00000463709 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
TM9SF2-202ENST00000463709 CAMK2BQ13554 666 aa11.21□□□□□ -0.61
TM9SF2-202ENST00000463709 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
TM9SF2-202ENST00000463709 PTPREP23469 700 aa11.2□□□□□ -0.62
TM9SF2-202ENST00000463709 KCTD12Q96CX2 325 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms