RNA–Protein interactions for RNA: ENST00000463409.6

COMMD3-BMI1-202, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 3

Gene COMMD3-BMI1, Length 605 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-202ENST00000463409 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
COMMD3-BMI1-202ENST00000463409 DAXXQ9UER7 740 aaPredicted RBP9.79□□□□□ -0.84
COMMD3-BMI1-202ENST00000463409 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
COMMD3-BMI1-202ENST00000463409 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
COMMD3-BMI1-202ENST00000463409 BCL11BQ9C0K0 894 aaPredicted RBP9.77□□□□□ -0.85
COMMD3-BMI1-202ENST00000463409 G3V3G9 751 aa9.76□□□□□ -0.85
COMMD3-BMI1-202ENST00000463409 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
COMMD3-BMI1-202ENST00000463409 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
COMMD3-BMI1-202ENST00000463409 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 ERBB3P21860 1342 aa9.7□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 SPRYD3Q8NCJ5 442 aa9.68□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 RNF166Q96A37 237 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 EFCAB3Q8N7B9 438 aa9.66□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 TMEM92Q6UXU6 159 aa9.65□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 MICALL2Q8IY33 904 aa9.65□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 RYDENQ9NUL5 291 aaKnown RBP9.65□□□□□ -0.86
COMMD3-BMI1-202ENST00000463409 SOX12O15370 315 aa9.64□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 VARS2Q5ST30 1063 aaKnown RBP9.64□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 GPR153Q6NV75 609 aa9.64□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 PTGER2P43116 358 aa9.62□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 NLRP6P59044 892 aa9.6□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
COMMD3-BMI1-202ENST00000463409 MS4A4AQ96JQ5 239 aa9.58□□□□□ -0.88
COMMD3-BMI1-202ENST00000463409 GTPBP6O43824 516 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-BMI1-202ENST00000463409 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-BMI1-202ENST00000463409 PHF8Q9UPP1 1060 aa9.55□□□□□ -0.88
COMMD3-BMI1-202ENST00000463409 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
COMMD3-BMI1-202ENST00000463409 MFRPQ9BY79 579 aa9.54□□□□□ -0.88
COMMD3-BMI1-202ENST00000463409 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-BMI1-202ENST00000463409 ARSIQ5FYB1 569 aa9.49□□□□□ -0.89
COMMD3-BMI1-202ENST00000463409 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
COMMD3-BMI1-202ENST00000463409 LSM11P83369 360 aaKnown RBP eCLIP9.46□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 ARXQ96QS3 562 aa9.46□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 KIF3CO14782 793 aa9.45□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 PBX2P40425 430 aa9.44□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 PPP1R37O75864 691 aa9.43□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 SLC34A2O95436 690 aa9.4□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.95e-7■□□□□ 10.8
COMMD3-BMI1-202ENST00000463409 BCANQ96GW7 911 aa9.4□□□□□ -0.9
COMMD3-BMI1-202ENST00000463409 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
COMMD3-BMI1-202ENST00000463409 POTEEQ6S8J3 1075 aa9.36□□□□□ -0.91
COMMD3-BMI1-202ENST00000463409 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
COMMD3-BMI1-202ENST00000463409 NUDT7P0C024 238 aa9.33□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 PDE4AP27815 886 aa9.32□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 LHX6Q9UPM6 363 aa9.32□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 TIMELESSQ9UNS1 1208 aa9.3□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 CADPS2Q86UW7 1296 aa9.29□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 KDM4FA0A1W2PPD8 638 aa9.28□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
COMMD3-BMI1-202ENST00000463409 TMC2Q8TDI7 906 aa9.27□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 KDM2AQ9Y2K7 1162 aa9.27□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 TK2O00142 265 aa9.26□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 ARHGAP33O14559 1287 aa9.26□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 ADGRD1Q6QNK2 874 aa9.26□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 AXIN2Q9Y2T1 843 aa9.26□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 HRO43593 1189 aa9.23□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
COMMD3-BMI1-202ENST00000463409 PTCD2Q8WV60 388 aaKnown RBP9.21□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 CRISPLD2Q9H0B8 497 aa9.21□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 TPRNQ4KMQ1 711 aa9.2□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 NCKAP5LQ9HCH0 1330 aa9.2□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 MFSD10Q14728 455 aa9.16□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 FOXK1P85037 733 aa9.15□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 E2F4Q16254 413 aa9.15□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 PPP1R15BQ5SWA1 713 aa9.15□□□□□ -0.94
COMMD3-BMI1-202ENST00000463409 DSG2Q14126 1118 aa9.14□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 PLPP6Q8IY26 295 aa9.14□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 P3H3Q8IVL6 736 aa9.13□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 PSEN2P49810 448 aa9.12□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 IFFO2Q5TF58 517 aa9.12□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 RGS20O76081 388 aa9.11□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 PPP4R3BQ5MIZ7 849 aa9.1□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 HOMEZQ8IX15 550 aa9.1□□□□□ -0.95
COMMD3-BMI1-202ENST00000463409 ERICH6Q7L0X2 663 aa9.07□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 SLC4A5Q9BY07 1137 aa9.07□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 TBC1D12O60347 775 aa9.06□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 CAMK2BQ13554 666 aa9.06□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 ARHGEF1Q92888 912 aaKnown RBP9.06□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 MAP3K9P80192 1104 aa9.05□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 GTF3C3Q9Y5Q9 886 aa9.05□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 NBR1Q14596 966 aa9.04□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
COMMD3-BMI1-202ENST00000463409 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms