RNA–Protein interactions for RNA: ENST00000463300.1

CLHC1-209, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-209ENST00000463300 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
CLHC1-209ENST00000463300 MFSD10Q14728 455 aa11.6□□□□□ -0.55
CLHC1-209ENST00000463300 LARP6Q9BRS8 491 aaKnown RBP11.6□□□□□ -0.55
CLHC1-209ENST00000463300 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
CLHC1-209ENST00000463300 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
CLHC1-209ENST00000463300 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
CLHC1-209ENST00000463300 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
CLHC1-209ENST00000463300 KIF3CO14782 793 aa11.53□□□□□ -0.56
CLHC1-209ENST00000463300 E2F4Q16254 413 aa11.53□□□□□ -0.56
CLHC1-209ENST00000463300 PRKCSHP14314 528 aaPredicted RBP11.52□□□□□ -0.57
CLHC1-209ENST00000463300 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
CLHC1-209ENST00000463300 C2orf72A6NCS6 295 aa11.5□□□□□ -0.57
CLHC1-209ENST00000463300 FOXK1P85037 733 aa11.5□□□□□ -0.57
CLHC1-209ENST00000463300 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
CLHC1-209ENST00000463300 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
CLHC1-209ENST00000463300 CAMK2BQ13554 666 aa11.48□□□□□ -0.57
CLHC1-209ENST00000463300 DSG2Q14126 1118 aa11.48□□□□□ -0.57
CLHC1-209ENST00000463300 TMEM92Q6UXU6 159 aa11.48□□□□□ -0.57
CLHC1-209ENST00000463300 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
CLHC1-209ENST00000463300 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
CLHC1-209ENST00000463300 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
CLHC1-209ENST00000463300 NBR1Q14596 966 aa11.45□□□□□ -0.58
CLHC1-209ENST00000463300 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
CLHC1-209ENST00000463300 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
CLHC1-209ENST00000463300 PLPP6Q8IY26 295 aa11.43□□□□□ -0.58
CLHC1-209ENST00000463300 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
CLHC1-209ENST00000463300 SCUBE2Q9NQ36 999 aa11.37□□□□□ -0.59
CLHC1-209ENST00000463300 EMILIN3Q9NT22 766 aa11.36□□□□□ -0.59
CLHC1-209ENST00000463300 TPRNQ4KMQ1 711 aa11.35□□□□□ -0.59
CLHC1-209ENST00000463300 SLC34A2O95436 690 aa11.31□□□□□ -0.6
CLHC1-209ENST00000463300 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
CLHC1-209ENST00000463300 OXER1Q8TDS5 423 aa11.3□□□□□ -0.6
CLHC1-209ENST00000463300 DPYSL4O14531 572 aa11.29□□□□□ -0.6
CLHC1-209ENST00000463300 SPDYE16A6NNV3 312 aaPredicted RBP11.28□□□□□ -0.6
CLHC1-209ENST00000463300 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
CLHC1-209ENST00000463300 PTCD2Q8WV60 388 aaKnown RBP11.27□□□□□ -0.61
CLHC1-209ENST00000463300 SEMA3EO15041 775 aa11.26□□□□□ -0.61
CLHC1-209ENST00000463300 PDIA6Q15084 440 aa11.26□□□□□ -0.61
CLHC1-209ENST00000463300 LHX8Q68G74 356 aa11.26□□□□□ -0.61
CLHC1-209ENST00000463300 TESPA1A2RU30 521 aaPredicted RBP11.25□□□□□ -0.61
CLHC1-209ENST00000463300 TBC1D12O60347 775 aa11.25□□□□□ -0.61
CLHC1-209ENST00000463300 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLHC1-209ENST00000463300 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
CLHC1-209ENST00000463300 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
CLHC1-209ENST00000463300 DOK7Q18PE1 504 aa11.21□□□□□ -0.61
CLHC1-209ENST00000463300 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
CLHC1-209ENST00000463300 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
CLHC1-209ENST00000463300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLHC1-209ENST00000463300 PCDHGA4Q9Y5G9 962 aa11.19□□□□□ -0.62
CLHC1-209ENST00000463300 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
CLHC1-209ENST00000463300 SNPHO15079 494 aa11.17□□□□□ -0.62
CLHC1-209ENST00000463300 EVI5O60447 810 aa11.17□□□□□ -0.62
CLHC1-209ENST00000463300 PTGER2P43116 358 aa11.17□□□□□ -0.62
CLHC1-209ENST00000463300 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
CLHC1-209ENST00000463300 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
CLHC1-209ENST00000463300 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
CLHC1-209ENST00000463300 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
CLHC1-209ENST00000463300 LMOD2Q6P5Q4 547 aa11.13□□□□□ -0.63
CLHC1-209ENST00000463300 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
CLHC1-209ENST00000463300 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
CLHC1-209ENST00000463300 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
CLHC1-209ENST00000463300 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
CLHC1-209ENST00000463300 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
CLHC1-209ENST00000463300 DDX12PQ92771 950 aa11.07□□□□□ -0.64
CLHC1-209ENST00000463300 PHF14O94880 888 aa11.05□□□□□ -0.64
CLHC1-209ENST00000463300 NUDT7P0C024 238 aa11.05□□□□□ -0.64
CLHC1-209ENST00000463300 OSBPP22059 807 aa11.05□□□□□ -0.64
CLHC1-209ENST00000463300 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
CLHC1-209ENST00000463300 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLHC1-209ENST00000463300 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
CLHC1-209ENST00000463300 EPAS1Q99814 870 aa11.03□□□□□ -0.64
CLHC1-209ENST00000463300 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
CLHC1-209ENST00000463300 PCDHGA10Q9Y5H3 936 aa11□□□□□ -0.65
CLHC1-209ENST00000463300 FOSBP53539 338 aa10.99□□□□□ -0.65
CLHC1-209ENST00000463300 ZC3H15Q8WU90 426 aaKnown RBP10.99□□□□□ -0.65
CLHC1-209ENST00000463300 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
CLHC1-209ENST00000463300 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
CLHC1-209ENST00000463300 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
CLHC1-209ENST00000463300 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
CLHC1-209ENST00000463300 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
CLHC1-209ENST00000463300 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
CLHC1-209ENST00000463300 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
CLHC1-209ENST00000463300 ZNF454Q8N9F8 522 aa10.95□□□□□ -0.66
CLHC1-209ENST00000463300 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
CLHC1-209ENST00000463300 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
CLHC1-209ENST00000463300 ST18O60284 1047 aa10.93□□□□□ -0.66
CLHC1-209ENST00000463300 ZMYND10O75800 440 aa10.93□□□□□ -0.66
CLHC1-209ENST00000463300 MAP3K7O43318 606 aa10.91□□□□□ -0.66
CLHC1-209ENST00000463300 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
CLHC1-209ENST00000463300 GPR37O15354 613 aa10.9□□□□□ -0.66
CLHC1-209ENST00000463300 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
CLHC1-209ENST00000463300 FCHSD2O94868 740 aa10.89□□□□□ -0.67
CLHC1-209ENST00000463300 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
CLHC1-209ENST00000463300 PTGDRQ13258 359 aa10.88□□□□□ -0.67
CLHC1-209ENST00000463300 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
CLHC1-209ENST00000463300 FAM163AQ96GL9 167 aaPredicted RBP10.88□□□□□ -0.67
CLHC1-209ENST00000463300 ADAM33Q9BZ11 813 aa10.88□□□□□ -0.67
CLHC1-209ENST00000463300 HIC1Q14526 733 aa10.87□□□□□ -0.67
CLHC1-209ENST00000463300 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
CLHC1-209ENST00000463300 BCL2L12Q9HB09 334 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms