RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
COPS3-205ENST00000463097 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
COPS3-205ENST00000463097 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
COPS3-205ENST00000463097 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
COPS3-205ENST00000463097 SPDYE16A6NNV3 312 aaPredicted RBP10.73□□□□□ -0.69
COPS3-205ENST00000463097 RSPH6AQ9H0K4 717 aa10.73□□□□□ -0.69
COPS3-205ENST00000463097 DPYSL4O14531 572 aa10.72□□□□□ -0.69
COPS3-205ENST00000463097 PHF12Q96QT6 1004 aa10.72□□□□□ -0.69
COPS3-205ENST00000463097 PDIA6Q15084 440 aa10.7□□□□□ -0.7
COPS3-205ENST00000463097 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
COPS3-205ENST00000463097 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
COPS3-205ENST00000463097 CD44P16070 742 aaKnown RBP10.67□□□□□ -0.7
COPS3-205ENST00000463097 ILDR1Q86SU0 546 aaPredicted RBP10.66□□□□□ -0.7
COPS3-205ENST00000463097 PIP4P2Q8N4L2 257 aa10.66□□□□□ -0.7
COPS3-205ENST00000463097 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
COPS3-205ENST00000463097 GPR37O15354 613 aa10.65□□□□□ -0.7
COPS3-205ENST00000463097 DSG2Q14126 1118 aa10.65□□□□□ -0.7
COPS3-205ENST00000463097 FAM117AQ9C073 453 aa10.65□□□□□ -0.7
COPS3-205ENST00000463097 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
COPS3-205ENST00000463097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.64□□□□□ -0.71
COPS3-205ENST00000463097 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
COPS3-205ENST00000463097 PODXL2Q9NZ53 605 aa10.63□□□□□ -0.71
COPS3-205ENST00000463097 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
COPS3-205ENST00000463097 FOXK1P85037 733 aa10.6□□□□□ -0.71
COPS3-205ENST00000463097 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
COPS3-205ENST00000463097 PLEKHG3A1L390 1219 aa10.59□□□□□ -0.71
COPS3-205ENST00000463097 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
COPS3-205ENST00000463097 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
COPS3-205ENST00000463097 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
COPS3-205ENST00000463097 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
COPS3-205ENST00000463097 IRF6O14896 467 aa10.57□□□□□ -0.72
COPS3-205ENST00000463097 TIE1P35590 1138 aa10.57□□□□□ -0.72
COPS3-205ENST00000463097 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
COPS3-205ENST00000463097 GRXCR2A6NFK2 248 aa10.56□□□□□ -0.72
COPS3-205ENST00000463097 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
COPS3-205ENST00000463097 AMHR2Q16671 573 aa10.56□□□□□ -0.72
COPS3-205ENST00000463097 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
COPS3-205ENST00000463097 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
COPS3-205ENST00000463097 PARP9Q8IXQ6 854 aa10.54□□□□□ -0.72
COPS3-205ENST00000463097 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
COPS3-205ENST00000463097 ARID3AQ99856 593 aa10.54□□□□□ -0.72
COPS3-205ENST00000463097 GNPATO15228 680 aa10.53□□□□□ -0.72
COPS3-205ENST00000463097 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
COPS3-205ENST00000463097 FLIIQ13045 1269 aa10.53□□□□□ -0.72
COPS3-205ENST00000463097 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
COPS3-205ENST00000463097 OSBPP22059 807 aa10.51□□□□□ -0.73
COPS3-205ENST00000463097 TRIM26Q12899 539 aaPredicted RBP10.5□□□□□ -0.73
COPS3-205ENST00000463097 HIC1Q14526 733 aa10.5□□□□□ -0.73
COPS3-205ENST00000463097 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
COPS3-205ENST00000463097 BMP2KQ9NSY1 1161 aaPredicted RBP10.5□□□□□ -0.73
COPS3-205ENST00000463097 FCHSD2O94868 740 aa10.49□□□□□ -0.73
COPS3-205ENST00000463097 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
COPS3-205ENST00000463097 C2orf72A6NCS6 295 aa10.47□□□□□ -0.73
COPS3-205ENST00000463097 APBB1O00213 710 aa10.47□□□□□ -0.73
COPS3-205ENST00000463097 ARID3CA6NKF2 412 aa10.46□□□□□ -0.73
COPS3-205ENST00000463097 KIF3CO14782 793 aa10.46□□□□□ -0.73
COPS3-205ENST00000463097 FECHP22830 423 aa10.46□□□□□ -0.73
COPS3-205ENST00000463097 PTGER2P43116 358 aa10.45□□□□□ -0.74
COPS3-205ENST00000463097 TTLL12Q14166 644 aaPredicted RBP10.45□□□□□ -0.74
COPS3-205ENST00000463097 PDCD7Q8N8D1 485 aaKnown RBP10.45□□□□□ -0.74
COPS3-205ENST00000463097 TMEM121BQ9BXQ6 578 aaPredicted RBP10.45□□□□□ -0.74
COPS3-205ENST00000463097 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
COPS3-205ENST00000463097 HRCP23327 699 aa10.43□□□□□ -0.74
COPS3-205ENST00000463097 BOLA1Q9Y3E2 137 aa10.43□□□□□ -0.74
COPS3-205ENST00000463097 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
COPS3-205ENST00000463097 DDX12PQ92771 950 aa10.42□□□□□ -0.74
COPS3-205ENST00000463097 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
COPS3-205ENST00000463097 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
COPS3-205ENST00000463097 A6NJR5 290 aa10.4□□□□□ -0.74
COPS3-205ENST00000463097 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
COPS3-205ENST00000463097 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
COPS3-205ENST00000463097 G3V3G9 751 aa10.39□□□□□ -0.75
COPS3-205ENST00000463097 MS4A1P11836 297 aa10.39□□□□□ -0.75
COPS3-205ENST00000463097 PTGDRQ13258 359 aa10.39□□□□□ -0.75
COPS3-205ENST00000463097 TBC1D12O60347 775 aa10.38□□□□□ -0.75
COPS3-205ENST00000463097 RANGAP1P46060 587 aaPredicted RBP10.38□□□□□ -0.75
COPS3-205ENST00000463097 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
COPS3-205ENST00000463097 OCEL1Q9H607 264 aa10.37□□□□□ -0.75
COPS3-205ENST00000463097 TRAK2O60296 914 aa10.36□□□□□ -0.75
COPS3-205ENST00000463097 IRX5P78411 483 aaPredicted RBP10.36□□□□□ -0.75
COPS3-205ENST00000463097 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
COPS3-205ENST00000463097 REPIN1Q9BWE0 567 aaKnown RBP10.35□□□□□ -0.75
COPS3-205ENST00000463097 GALR2O43603 387 aaPredicted RBP10.34□□□□□ -0.75
COPS3-205ENST00000463097 EVI5O60447 810 aa10.34□□□□□ -0.75
COPS3-205ENST00000463097 SH3D19Q5HYK7 790 aa10.34□□□□□ -0.75
COPS3-205ENST00000463097 PDIA4P13667 645 aaKnown RBP10.31□□□□□ -0.76
COPS3-205ENST00000463097 ATN1P54259 1190 aaPredicted RBP10.31□□□□□ -0.76
COPS3-205ENST00000463097 MCM6Q14566 821 aa10.31□□□□□ -0.76
COPS3-205ENST00000463097 IER5LQ5T953 404 aa10.31□□□□□ -0.76
COPS3-205ENST00000463097 CCDC82Q8N4S0 544 aa10.31□□□□□ -0.76
COPS3-205ENST00000463097 TMUB1Q9BVT8 246 aa10.31□□□□□ -0.76
COPS3-205ENST00000463097 CLCN1P35523 988 aa10.3□□□□□ -0.76
COPS3-205ENST00000463097 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
COPS3-205ENST00000463097 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
COPS3-205ENST00000463097 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
COPS3-205ENST00000463097 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
COPS3-205ENST00000463097 NPDC1Q9NQX5 325 aaPredicted RBP10.27□□□□□ -0.77
COPS3-205ENST00000463097 PLCG2P16885 1265 aa10.26□□□□□ -0.77
COPS3-205ENST00000463097 SSTR3P32745 418 aaPredicted RBP10.26□□□□□ -0.77
COPS3-205ENST00000463097 MDM2Q00987 491 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms