RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
KDM3A-208ENST00000463013 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
KDM3A-208ENST00000463013 ARSIQ5FYB1 569 aa10.81□□□□□ -0.68
KDM3A-208ENST00000463013 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
KDM3A-208ENST00000463013 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
KDM3A-208ENST00000463013 NLRP6P59044 892 aa10.77□□□□□ -0.69
KDM3A-208ENST00000463013 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
KDM3A-208ENST00000463013 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
KDM3A-208ENST00000463013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
KDM3A-208ENST00000463013 PBX2P40425 430 aa10.76□□□□□ -0.69
KDM3A-208ENST00000463013 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
KDM3A-208ENST00000463013 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
KDM3A-208ENST00000463013 MS4A4AQ96JQ5 239 aa10.76□□□□□ -0.69
KDM3A-208ENST00000463013 PKD2Q13563 968 aa10.73□□□□□ -0.69
KDM3A-208ENST00000463013 RTN4Q9NQC3 1192 aaKnown RBP10.72□□□□□ -0.69
KDM3A-208ENST00000463013 HCSTQ9UBK5 93 aa10.68□□□□□ -0.7
KDM3A-208ENST00000463013 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
KDM3A-208ENST00000463013 KHSRPQ92945 711 aaKnown RBP eCLIP10.66□□□□□ -0.7
KDM3A-208ENST00000463013 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
KDM3A-208ENST00000463013 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
KDM3A-208ENST00000463013 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
KDM3A-208ENST00000463013 SLC34A2O95436 690 aa10.62□□□□□ -0.71
KDM3A-208ENST00000463013 NUDT7P0C024 238 aa10.62□□□□□ -0.71
KDM3A-208ENST00000463013 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
KDM3A-208ENST00000463013 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
KDM3A-208ENST00000463013 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
KDM3A-208ENST00000463013 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
KDM3A-208ENST00000463013 KIF3CO14782 793 aa10.59□□□□□ -0.71
KDM3A-208ENST00000463013 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
KDM3A-208ENST00000463013 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
KDM3A-208ENST00000463013 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
KDM3A-208ENST00000463013 ARHGAP33O14559 1287 aa10.57□□□□□ -0.72
KDM3A-208ENST00000463013 RGL2O15211 777 aa10.56□□□□□ -0.72
KDM3A-208ENST00000463013 AXIN2Q9Y2T1 843 aa10.55□□□□□ -0.72
KDM3A-208ENST00000463013 ADGRD1Q6QNK2 874 aa10.54□□□□□ -0.72
KDM3A-208ENST00000463013 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
KDM3A-208ENST00000463013 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
KDM3A-208ENST00000463013 STK25O00506 426 aa10.53□□□□□ -0.72
KDM3A-208ENST00000463013 TK2O00142 265 aa10.52□□□□□ -0.73
KDM3A-208ENST00000463013 POTEEQ6S8J3 1075 aa10.5□□□□□ -0.73
KDM3A-208ENST00000463013 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
KDM3A-208ENST00000463013 TBC1D12O60347 775 aa10.45□□□□□ -0.74
KDM3A-208ENST00000463013 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
KDM3A-208ENST00000463013 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
KDM3A-208ENST00000463013 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
KDM3A-208ENST00000463013 HRO43593 1189 aa10.41□□□□□ -0.74
KDM3A-208ENST00000463013 RGS20O76081 388 aa10.4□□□□□ -0.74
KDM3A-208ENST00000463013 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
KDM3A-208ENST00000463013 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
KDM3A-208ENST00000463013 PSEN2P49810 448 aa10.37□□□□□ -0.75
KDM3A-208ENST00000463013 DMRTA1Q5VZB9 504 aa10.36□□□□□ -0.75
KDM3A-208ENST00000463013 FOXK1P85037 733 aa10.35□□□□□ -0.75
KDM3A-208ENST00000463013 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
KDM3A-208ENST00000463013 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
KDM3A-208ENST00000463013 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
KDM3A-208ENST00000463013 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
KDM3A-208ENST00000463013 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
KDM3A-208ENST00000463013 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
KDM3A-208ENST00000463013 PTPN5P54829 565 aa10.29□□□□□ -0.76
KDM3A-208ENST00000463013 PPP1R37O75864 691 aa10.28□□□□□ -0.76
KDM3A-208ENST00000463013 VPS9D1Q9Y2B5 631 aa10.28□□□□□ -0.76
KDM3A-208ENST00000463013 GOLGA8CPA6NN73 597 aa10.27□□□□□ -0.77
KDM3A-208ENST00000463013 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
KDM3A-208ENST00000463013 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
KDM3A-208ENST00000463013 DNAJC5Q9H3Z4 198 aa10.26□□□□□ -0.77
KDM3A-208ENST00000463013 DSG2Q14126 1118 aa10.23□□□□□ -0.77
KDM3A-208ENST00000463013 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
KDM3A-208ENST00000463013 BCL2L12Q9HB09 334 aa10.21□□□□□ -0.77
KDM3A-208ENST00000463013 PTPREP23469 700 aa10.2□□□□□ -0.78
KDM3A-208ENST00000463013 MRPL50Q8N5N7 158 aaKnown RBP10.2□□□□□ -0.78
KDM3A-208ENST00000463013 ZNF454Q8N9F8 522 aa10.2□□□□□ -0.78
KDM3A-208ENST00000463013 NKX1-1Q15270 411 aaPredicted RBP10.19□□□□□ -0.78
KDM3A-208ENST00000463013 THSD4Q6ZMP0 1018 aa10.19□□□□□ -0.78
KDM3A-208ENST00000463013 WNT2BQ93097 391 aa10.19□□□□□ -0.78
KDM3A-208ENST00000463013 A0A0G2JS52 829 aa10.18□□□□□ -0.78
KDM3A-208ENST00000463013 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
KDM3A-208ENST00000463013 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
KDM3A-208ENST00000463013 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
KDM3A-208ENST00000463013 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
KDM3A-208ENST00000463013 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
KDM3A-208ENST00000463013 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
KDM3A-208ENST00000463013 FOSBP53539 338 aa10.12□□□□□ -0.79
KDM3A-208ENST00000463013 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
KDM3A-208ENST00000463013 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
KDM3A-208ENST00000463013 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
KDM3A-208ENST00000463013 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
KDM3A-208ENST00000463013 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
KDM3A-208ENST00000463013 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
KDM3A-208ENST00000463013 SPRYD3Q8NCJ5 442 aa10.07□□□□□ -0.8
KDM3A-208ENST00000463013 PDE4AP27815 886 aa10.06□□□□□ -0.8
KDM3A-208ENST00000463013 ANKK1Q8NFD2 765 aa10.06□□□□□ -0.8
KDM3A-208ENST00000463013 NYAP1Q6ZVC0 841 aa10.05□□□□□ -0.8
KDM3A-208ENST00000463013 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
KDM3A-208ENST00000463013 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
KDM3A-208ENST00000463013 EVI5O60447 810 aa10.03□□□□□ -0.8
KDM3A-208ENST00000463013 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
KDM3A-208ENST00000463013 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
KDM3A-208ENST00000463013 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
KDM3A-208ENST00000463013 Q6ZNB5 142 aa10.02□□□□□ -0.81
KDM3A-208ENST00000463013 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms