RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
SGCE-209ENST00000462731 IGSF3O75054 1194 aa9.95□□□□□ -0.82
SGCE-209ENST00000462731 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
SGCE-209ENST00000462731 APBB1O00213 710 aa9.94□□□□□ -0.82
SGCE-209ENST00000462731 KCTD17Q8N5Z5 321 aa9.94□□□□□ -0.82
SGCE-209ENST00000462731 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
SGCE-209ENST00000462731 HSP90B1P14625 803 aaKnown RBP9.92□□□□□ -0.82
SGCE-209ENST00000462731 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
SGCE-209ENST00000462731 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
SGCE-209ENST00000462731 ARID3CA6NKF2 412 aa9.9□□□□□ -0.82
SGCE-209ENST00000462731 TTLL13PA6NNM8 815 aa9.9□□□□□ -0.82
SGCE-209ENST00000462731 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
SGCE-209ENST00000462731 WDR70Q9NW82 654 aa9.89□□□□□ -0.83
SGCE-209ENST00000462731 RAD21O60216 631 aa9.88□□□□□ -0.83
SGCE-209ENST00000462731 ZMYND10O75800 440 aa9.88□□□□□ -0.83
SGCE-209ENST00000462731 IER5LQ5T953 404 aa9.88□□□□□ -0.83
SGCE-209ENST00000462731 MAP3K13O43283 966 aa9.87□□□□□ -0.83
SGCE-209ENST00000462731 RGS22Q8NE09 1264 aa9.87□□□□□ -0.83
SGCE-209ENST00000462731 TRAIPQ9BWF2 469 aa9.87□□□□□ -0.83
SGCE-209ENST00000462731 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
SGCE-209ENST00000462731 MIER1Q8N108 512 aa9.85□□□□□ -0.83
SGCE-209ENST00000462731 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
SGCE-209ENST00000462731 RIOK3O14730 519 aaKnown RBP9.83□□□□□ -0.84
SGCE-209ENST00000462731 SNPHO15079 494 aa9.83□□□□□ -0.84
SGCE-209ENST00000462731 PUS7Q96PZ0 661 aaKnown RBP9.83□□□□□ -0.84
SGCE-209ENST00000462731 STK25O00506 426 aa9.81□□□□□ -0.84
SGCE-209ENST00000462731 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
SGCE-209ENST00000462731 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
SGCE-209ENST00000462731 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
SGCE-209ENST00000462731 FLIIQ13045 1269 aa9.8□□□□□ -0.84
SGCE-209ENST00000462731 CCDC82Q8N4S0 544 aa9.8□□□□□ -0.84
SGCE-209ENST00000462731 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
SGCE-209ENST00000462731 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
SGCE-209ENST00000462731 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
SGCE-209ENST00000462731 GPBP1L1Q9HC44 474 aaPredicted RBP9.78□□□□□ -0.84
SGCE-209ENST00000462731 TMCO4Q5TGY1 634 aa9.77□□□□□ -0.85
SGCE-209ENST00000462731 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
SGCE-209ENST00000462731 MTMR7Q9Y216 660 aa9.77□□□□□ -0.85
SGCE-209ENST00000462731 GSE1Q14687 1217 aa9.76□□□□□ -0.85
SGCE-209ENST00000462731 AK7Q96M32 723 aa9.76□□□□□ -0.85
SGCE-209ENST00000462731 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
SGCE-209ENST00000462731 KDM4CQ9H3R0 1056 aa9.75□□□□□ -0.85
SGCE-209ENST00000462731 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
SGCE-209ENST00000462731 PLCG2P16885 1265 aa9.73□□□□□ -0.85
SGCE-209ENST00000462731 A6NJR5 290 aa9.72□□□□□ -0.85
SGCE-209ENST00000462731 EMP3P54852 163 aa9.72□□□□□ -0.85
SGCE-209ENST00000462731 POTEB3A0JP26 581 aa9.71□□□□□ -0.86
SGCE-209ENST00000462731 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
SGCE-209ENST00000462731 MFAP1P55081 439 aaKnown RBP9.71□□□□□ -0.86
SGCE-209ENST00000462731 POTEBQ6S5H4 581 aa9.71□□□□□ -0.86
SGCE-209ENST00000462731 HS3ST6Q96QI5 342 aa9.71□□□□□ -0.86
SGCE-209ENST00000462731 SEMA3EO15041 775 aa9.7□□□□□ -0.86
SGCE-209ENST00000462731 CADPS2Q86UW7 1296 aa9.7□□□□□ -0.86
SGCE-209ENST00000462731 AEBP1Q8IUX7 1158 aa9.7□□□□□ -0.86
SGCE-209ENST00000462731 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
SGCE-209ENST00000462731 TRAK2O60296 914 aa9.69□□□□□ -0.86
SGCE-209ENST00000462731 SMYD5Q6GMV2 418 aa9.69□□□□□ -0.86
SGCE-209ENST00000462731 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
SGCE-209ENST00000462731 FAM205CA6NFA0 338 aa9.67□□□□□ -0.86
SGCE-209ENST00000462731 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
SGCE-209ENST00000462731 E9PSI1 815 aa9.66□□□□□ -0.86
SGCE-209ENST00000462731 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
SGCE-209ENST00000462731 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
SGCE-209ENST00000462731 CHMP4AQ9BY43 222 aa9.65□□□□□ -0.86
SGCE-209ENST00000462731 STK24Q9Y6E0 443 aa9.65□□□□□ -0.86
SGCE-209ENST00000462731 BCL11BQ9C0K0 894 aaPredicted RBP9.64□□□□□ -0.87
SGCE-209ENST00000462731 PCDHB13Q9Y5F0 798 aa9.64□□□□□ -0.87
SGCE-209ENST00000462731 ONECUT3O60422 494 aaPredicted RBP9.63□□□□□ -0.87
SGCE-209ENST00000462731 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
SGCE-209ENST00000462731 ZNF428Q96B54 188 aa9.62□□□□□ -0.87
SGCE-209ENST00000462731 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
SGCE-209ENST00000462731 E2F4Q16254 413 aa9.61□□□□□ -0.87
SGCE-209ENST00000462731 TMEM106CQ9BVX2 250 aa9.61□□□□□ -0.87
SGCE-209ENST00000462731 PDE4DQ08499 809 aa9.6□□□□□ -0.87
SGCE-209ENST00000462731 RNF166Q96A37 237 aaPredicted RBP9.6□□□□□ -0.87
SGCE-209ENST00000462731 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
SGCE-209ENST00000462731 SERPINA10Q9UK55 444 aa9.59□□□□□ -0.87
SGCE-209ENST00000462731 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
SGCE-209ENST00000462731 TRIM66O15016 1216 aa9.58□□□□□ -0.88
SGCE-209ENST00000462731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
SGCE-209ENST00000462731 KRI1Q8N9T8 703 aaKnown RBP9.57□□□□□ -0.88
SGCE-209ENST00000462731 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
SGCE-209ENST00000462731 ZFP91Q96JP5 570 aaPredicted RBP9.57□□□□□ -0.88
SGCE-209ENST00000462731 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
SGCE-209ENST00000462731 CCDC97Q96F63 343 aaPredicted RBP9.56□□□□□ -0.88
SGCE-209ENST00000462731 DDRGK1Q96HY6 314 aa9.54□□□□□ -0.88
SGCE-209ENST00000462731 FAM117AQ9C073 453 aa9.54□□□□□ -0.88
SGCE-209ENST00000462731 RSPH4AQ5TD94 716 aa9.53□□□□□ -0.88
SGCE-209ENST00000462731 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
SGCE-209ENST00000462731 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
SGCE-209ENST00000462731 PATL2C9JE40 543 aaKnown RBP9.52□□□□□ -0.89
SGCE-209ENST00000462731 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
SGCE-209ENST00000462731 NUBP1P53384 320 aa9.51□□□□□ -0.89
SGCE-209ENST00000462731 USP35Q9P2H5 1018 aa9.51□□□□□ -0.89
SGCE-209ENST00000462731 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
SGCE-209ENST00000462731 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
SGCE-209ENST00000462731 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
SGCE-209ENST00000462731 AMOTL2Q9Y2J4 779 aa9.5□□□□□ -0.89
SGCE-209ENST00000462731 IRF5Q13568 498 aa9.49□□□□□ -0.89
SGCE-209ENST00000462731 DCAF8Q5TAQ9 597 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms