RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TTC37Q6PGP7 1564 aa14.13□□□□□ -0.15
DDX39B-216ENST00000462421 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
DDX39B-216ENST00000462421 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
DDX39B-216ENST00000462421 POGZQ7Z3K3 1410 aa14.09□□□□□ -0.15
DDX39B-216ENST00000462421 SCAPERQ9BY12 1400 aa14.09□□□□□ -0.15
DDX39B-216ENST00000462421 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
DDX39B-216ENST00000462421 ZNF777Q9ULD5 760 aaPredicted RBP14.09□□□□□ -0.15
DDX39B-216ENST00000462421 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
DDX39B-216ENST00000462421 CFDP1Q9UEE9 299 aaPredicted RBP14.06□□□□□ -0.16
DDX39B-216ENST00000462421 ZNF518AQ6AHZ1 1483 aa14.06□□□□□ -0.16
DDX39B-216ENST00000462421 MAGI2Q86UL8 1455 aa14.05□□□□□ -0.16
DDX39B-216ENST00000462421 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
DDX39B-216ENST00000462421 KDM4FA0A1W2PPD8 638 aa14.04□□□□□ -0.16
DDX39B-216ENST00000462421 EHBP1L1Q8N3D4 1523 aa14.04□□□□□ -0.16
DDX39B-216ENST00000462421 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
DDX39B-216ENST00000462421 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
DDX39B-216ENST00000462421 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.16
DDX39B-216ENST00000462421 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
DDX39B-216ENST00000462421 PREX2Q70Z35 1606 aa14□□□□□ -0.17
DDX39B-216ENST00000462421 ZMYM4Q5VZL5 1548 aa14□□□□□ -0.17
DDX39B-216ENST00000462421 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
DDX39B-216ENST00000462421 C9orf84Q5VXU9 1444 aa13.98□□□□□ -0.17
DDX39B-216ENST00000462421 FRMPD1Q5SYB0 1578 aa13.97□□□□□ -0.17
DDX39B-216ENST00000462421 MLECQ14165 292 aa13.97□□□□□ -0.17
DDX39B-216ENST00000462421 RICTORQ6R327 1708 aa13.96□□□□□ -0.17
DDX39B-216ENST00000462421 AFAP1Q8N556 730 aa13.96□□□□□ -0.17
DDX39B-216ENST00000462421 SPAG9O60271 1321 aaKnown RBP13.95□□□□□ -0.18
DDX39B-216ENST00000462421 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
DDX39B-216ENST00000462421 ATP10AO60312 1499 aa13.95□□□□□ -0.18
DDX39B-216ENST00000462421 ABCC1P33527 1531 aa13.95□□□□□ -0.18
DDX39B-216ENST00000462421 PLPPR3Q6T4P5 718 aa13.94□□□□□ -0.18
DDX39B-216ENST00000462421 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
DDX39B-216ENST00000462421 HECW2Q9P2P5 1572 aa13.94□□□□□ -0.18
DDX39B-216ENST00000462421 GPATCH8Q9UKJ3 1502 aaKnown RBP13.94□□□□□ -0.18
DDX39B-216ENST00000462421 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
DDX39B-216ENST00000462421 YEATS2Q9ULM3 1422 aa13.92□□□□□ -0.18
DDX39B-216ENST00000462421 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDX39B-216ENST00000462421 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
DDX39B-216ENST00000462421 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
DDX39B-216ENST00000462421 SYCP2Q9BX26 1530 aa13.91□□□□□ -0.18
DDX39B-216ENST00000462421 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
DDX39B-216ENST00000462421 RSPH4AQ5TD94 716 aa13.91□□□□□ -0.18
DDX39B-216ENST00000462421 NCOA2Q15596 1464 aa13.91□□□□□ -0.18
DDX39B-216ENST00000462421 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
DDX39B-216ENST00000462421 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
DDX39B-216ENST00000462421 MLH3Q9UHC1 1453 aa13.9□□□□□ -0.18
DDX39B-216ENST00000462421 CDC42BPAQ5VT25 1732 aa13.9□□□□□ -0.18
DDX39B-216ENST00000462421 KDM5CP41229 1560 aa13.89□□□□□ -0.19
DDX39B-216ENST00000462421 LRRC9Q6ZRR7 1453 aa13.89□□□□□ -0.19
DDX39B-216ENST00000462421 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
DDX39B-216ENST00000462421 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
DDX39B-216ENST00000462421 BCORL1Q5H9F3 1711 aa13.88□□□□□ -0.19
DDX39B-216ENST00000462421 PTPRMP28827 1452 aa13.87□□□□□ -0.19
DDX39B-216ENST00000462421 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
DDX39B-216ENST00000462421 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
DDX39B-216ENST00000462421 CCDC141Q6ZP82 1450 aa13.84□□□□□ -0.19
DDX39B-216ENST00000462421 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
DDX39B-216ENST00000462421 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
DDX39B-216ENST00000462421 ADAMTSL3P82987 1691 aa13.83□□□□□ -0.2
DDX39B-216ENST00000462421 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
DDX39B-216ENST00000462421 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
DDX39B-216ENST00000462421 RIMS1Q86UR5 1692 aaKnown RBP13.82□□□□□ -0.2
DDX39B-216ENST00000462421 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
DDX39B-216ENST00000462421 REREQ9P2R6 1566 aa13.81□□□□□ -0.2
DDX39B-216ENST00000462421 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
DDX39B-216ENST00000462421 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
DDX39B-216ENST00000462421 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
DDX39B-216ENST00000462421 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
DDX39B-216ENST00000462421 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-216ENST00000462421 FER1L4A9Z1Z3 1794 aa13.8□□□□□ -0.2
DDX39B-216ENST00000462421 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
DDX39B-216ENST00000462421 A2MP01023 1474 aa13.8□□□□□ -0.2
DDX39B-216ENST00000462421 GGT6Q6P531 493 aa13.79□□□□□ -0.2
DDX39B-216ENST00000462421 AGLP35573 1532 aa13.79□□□□□ -0.2
DDX39B-216ENST00000462421 PPP6R1Q9UPN7 881 aa13.76□□□□□ -0.21
DDX39B-216ENST00000462421 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
DDX39B-216ENST00000462421 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
DDX39B-216ENST00000462421 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
DDX39B-216ENST00000462421 UHRF1BP1Q6BDS2 1440 aa13.74□□□□□ -0.21
DDX39B-216ENST00000462421 KIF3BO15066 747 aa13.74□□□□□ -0.21
DDX39B-216ENST00000462421 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
DDX39B-216ENST00000462421 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
DDX39B-216ENST00000462421 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
DDX39B-216ENST00000462421 DHX29Q7Z478 1369 aaKnown RBP13.73□□□□□ -0.21
DDX39B-216ENST00000462421 CEBPAP49715 358 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-216ENST00000462421 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
DDX39B-216ENST00000462421 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
DDX39B-216ENST00000462421 PTPN23Q9H3S7 1636 aa13.69□□□□□ -0.22
DDX39B-216ENST00000462421 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
DDX39B-216ENST00000462421 ANKRD30AQ9BXX3 1397 aa13.68□□□□□ -0.22
DDX39B-216ENST00000462421 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
DDX39B-216ENST00000462421 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
DDX39B-216ENST00000462421 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
DDX39B-216ENST00000462421 KANK1Q14678 1352 aa13.67□□□□□ -0.22
DDX39B-216ENST00000462421 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
DDX39B-216ENST00000462421 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
DDX39B-216ENST00000462421 NPATQ14207 1427 aa13.65□□□□□ -0.22
DDX39B-216ENST00000462421 FAM135AQ9P2D6 1515 aa13.65□□□□□ -0.22
DDX39B-216ENST00000462421 HSPA2P54652 639 aa13.65□□□□□ -0.22
DDX39B-216ENST00000462421 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms