RNA–Protein interactions for RNA: ENST00000462376.1

LYST-204, Transcript of lysosomal trafficking regulator, humanhuman

TSL 4

Gene LYST, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-204ENST00000462376 RTN4Q9NQC3 1192 aaKnown RBP13.81□□□□□ -0.2
LYST-204ENST00000462376 HOXB3P14651 431 aaPredicted RBP13.79□□□□□ -0.2
LYST-204ENST00000462376 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
LYST-204ENST00000462376 DOK7Q18PE1 504 aa13.77□□□□□ -0.21
LYST-204ENST00000462376 C2orf72A6NCS6 295 aa13.76□□□□□ -0.21
LYST-204ENST00000462376 EMP3P54852 163 aa13.75□□□□□ -0.21
LYST-204ENST00000462376 TMC2Q8TDI7 906 aa13.74□□□□□ -0.21
LYST-204ENST00000462376 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
LYST-204ENST00000462376 RIMBP2O15034 1052 aa13.71□□□□□ -0.21
LYST-204ENST00000462376 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
LYST-204ENST00000462376 RYDENQ9NUL5 291 aaKnown RBP13.69□□□□□ -0.22
LYST-204ENST00000462376 KIF3CO14782 793 aa13.67□□□□□ -0.22
LYST-204ENST00000462376 GTPBP6O43824 516 aaPredicted RBP13.66□□□□□ -0.22
LYST-204ENST00000462376 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
LYST-204ENST00000462376 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
LYST-204ENST00000462376 HS3ST6Q96QI5 342 aa13.62□□□□□ -0.23
LYST-204ENST00000462376 KHSRPQ92945 711 aaKnown RBP eCLIP13.61□□□□□ -0.23
LYST-204ENST00000462376 ERBB3P21860 1342 aa13.61□□□□□ -0.23
LYST-204ENST00000462376 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
LYST-204ENST00000462376 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
LYST-204ENST00000462376 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
LYST-204ENST00000462376 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
LYST-204ENST00000462376 GPHNQ9NQX3 736 aaPredicted RBP13.56□□□□□ -0.24
LYST-204ENST00000462376 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
LYST-204ENST00000462376 PLPP6Q8IY26 295 aa13.55□□□□□ -0.24
LYST-204ENST00000462376 DSG2Q14126 1118 aa13.54□□□□□ -0.24
LYST-204ENST00000462376 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
LYST-204ENST00000462376 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
LYST-204ENST00000462376 NUDT7P0C024 238 aa13.52□□□□□ -0.25
LYST-204ENST00000462376 FOXK1P85037 733 aa13.52□□□□□ -0.25
LYST-204ENST00000462376 PCDHGA4Q9Y5G9 962 aa13.51□□□□□ -0.25
LYST-204ENST00000462376 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
LYST-204ENST00000462376 PDE4AP27815 886 aa13.47□□□□□ -0.25
LYST-204ENST00000462376 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
LYST-204ENST00000462376 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.25
LYST-204ENST00000462376 SLC34A2O95436 690 aa13.45□□□□□ -0.26
LYST-204ENST00000462376 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
LYST-204ENST00000462376 CRISPLD2Q9H0B8 497 aa13.45□□□□□ -0.26
LYST-204ENST00000462376 PPP1R15BQ5SWA1 713 aa13.44□□□□□ -0.26
LYST-204ENST00000462376 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
LYST-204ENST00000462376 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
LYST-204ENST00000462376 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
LYST-204ENST00000462376 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
LYST-204ENST00000462376 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
LYST-204ENST00000462376 KRTAP3-3Q9BYR6 98 aa13.42□□□□□ -0.26
LYST-204ENST00000462376 KRTAP3-2Q9BYR7 98 aa13.42□□□□□ -0.26
LYST-204ENST00000462376 PAXIP1Q6ZW49 1069 aaPredicted RBP13.41□□□□□ -0.26
LYST-204ENST00000462376 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
LYST-204ENST00000462376 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
LYST-204ENST00000462376 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
LYST-204ENST00000462376 TBC1D12O60347 775 aa13.37□□□□□ -0.27
LYST-204ENST00000462376 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
LYST-204ENST00000462376 OXER1Q8TDS5 423 aa13.3□□□□□ -0.28
LYST-204ENST00000462376 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
LYST-204ENST00000462376 MFSD10Q14728 455 aa13.27□□□□□ -0.29
LYST-204ENST00000462376 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
LYST-204ENST00000462376 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
LYST-204ENST00000462376 MAP3K9P80192 1104 aa13.24□□□□□ -0.29
LYST-204ENST00000462376 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
LYST-204ENST00000462376 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
LYST-204ENST00000462376 EVI5O60447 810 aa13.2□□□□□ -0.3
LYST-204ENST00000462376 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
LYST-204ENST00000462376 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
LYST-204ENST00000462376 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
LYST-204ENST00000462376 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
LYST-204ENST00000462376 PBX2P40425 430 aa13.15□□□□□ -0.3
LYST-204ENST00000462376 PSEN2P49810 448 aa13.15□□□□□ -0.3
LYST-204ENST00000462376 ARHGAP33O14559 1287 aa13.14□□□□□ -0.31
LYST-204ENST00000462376 DPYSL4O14531 572 aa13.12□□□□□ -0.31
LYST-204ENST00000462376 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
LYST-204ENST00000462376 KCNK17Q96T54 332 aa13.1□□□□□ -0.31
LYST-204ENST00000462376 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
LYST-204ENST00000462376 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
LYST-204ENST00000462376 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
LYST-204ENST00000462376 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
LYST-204ENST00000462376 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
LYST-204ENST00000462376 FOSBP53539 338 aa13.07□□□□□ -0.32
LYST-204ENST00000462376 KCNH8Q96L42 1107 aa13.06□□□□□ -0.32
LYST-204ENST00000462376 RNF166Q96A37 237 aaPredicted RBP13.05□□□□□ -0.32
LYST-204ENST00000462376 JPH4Q96JJ6 628 aa13.04□□□□□ -0.32
LYST-204ENST00000462376 E2F4Q16254 413 aa13.03□□□□□ -0.32
LYST-204ENST00000462376 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
LYST-204ENST00000462376 ZDHHC16Q969W1 377 aa13.03□□□□□ -0.32
LYST-204ENST00000462376 ADAM33Q9BZ11 813 aa13.01□□□□□ -0.33
LYST-204ENST00000462376 PCDHGA10Q9Y5H3 936 aa13.01□□□□□ -0.33
LYST-204ENST00000462376 PTPREP23469 700 aa13□□□□□ -0.33
LYST-204ENST00000462376 DDX12PQ92771 950 aa13□□□□□ -0.33
LYST-204ENST00000462376 BCL2L12Q9HB09 334 aa12.99□□□□□ -0.33
LYST-204ENST00000462376 PTGER2P43116 358 aa12.97□□□□□ -0.33
LYST-204ENST00000462376 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
LYST-204ENST00000462376 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
LYST-204ENST00000462376 PHF14O94880 888 aa12.94□□□□□ -0.34
LYST-204ENST00000462376 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
LYST-204ENST00000462376 TK2O00142 265 aa12.92□□□□□ -0.34
LYST-204ENST00000462376 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
LYST-204ENST00000462376 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
LYST-204ENST00000462376 PDIA6Q15084 440 aa12.9□□□□□ -0.34
LYST-204ENST00000462376 GRXCR2A6NFK2 248 aa12.89□□□□□ -0.35
LYST-204ENST00000462376 HRO43593 1189 aa12.89□□□□□ -0.35
LYST-204ENST00000462376 NBR1Q14596 966 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms