RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 CDC42BPBQ9Y5S2 1711 aa30.01■■■□□ 2.4
PTPN18-207ENST00000462321 ARAP3Q8WWN8 1544 aa30■■■□□ 2.39
PTPN18-207ENST00000462321 ITGAEP38570 1179 aa30■■■□□ 2.39
PTPN18-207ENST00000462321 ARHGAP5Q13017 1502 aa30■■■□□ 2.39
PTPN18-207ENST00000462321 ZNF644Q9H582 1327 aaPredicted RBP29.99■■■□□ 2.39
PTPN18-207ENST00000462321 ZNF777Q9ULD5 760 aaPredicted RBP29.96■■■□□ 2.39
PTPN18-207ENST00000462321 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
PTPN18-207ENST00000462321 DNMT1P26358 1616 aaKnown RBP29.94■■■□□ 2.38
PTPN18-207ENST00000462321 SAMD9LQ8IVG5 1584 aa29.94■■■□□ 2.38
PTPN18-207ENST00000462321 PTPRKQ15262 1439 aa29.92■■■□□ 2.38
PTPN18-207ENST00000462321 DAPK1P53355 1430 aa29.91■■■□□ 2.38
PTPN18-207ENST00000462321 EFCAB2Q5VUJ9 269 aa29.9■■■□□ 2.38
PTPN18-207ENST00000462321 PLEKHH2Q8IVE3 1493 aa29.89■■■□□ 2.38
PTPN18-207ENST00000462321 GLI2P10070 1586 aa29.89■■■□□ 2.38
PTPN18-207ENST00000462321 ABCC5O15440 1437 aa29.89■■■□□ 2.37
PTPN18-207ENST00000462321 CD109Q6YHK3 1445 aa29.86■■■□□ 2.37
PTPN18-207ENST00000462321 KIAA1107Q9UPP5 1409 aa29.86■■■□□ 2.37
PTPN18-207ENST00000462321 ARHGEF5Q12774 1597 aa29.85■■■□□ 2.37
PTPN18-207ENST00000462321 DIP2BQ9P265 1576 aa29.85■■■□□ 2.37
PTPN18-207ENST00000462321 MBD5Q9P267 1494 aa29.84■■■□□ 2.37
PTPN18-207ENST00000462321 FANCAO15360 1455 aa29.84■■■□□ 2.37
PTPN18-207ENST00000462321 SYCP2Q9BX26 1530 aa29.82■■■□□ 2.36
PTPN18-207ENST00000462321 ABCC1P33527 1531 aa29.81■■■□□ 2.36
PTPN18-207ENST00000462321 AKNAQ7Z591 1439 aa29.81■■■□□ 2.36
PTPN18-207ENST00000462321 CROCC2H7BZ55 1655 aa29.8■■■□□ 2.36
PTPN18-207ENST00000462321 SHANK2Q9UPX8 1470 aa29.8■■■□□ 2.36
PTPN18-207ENST00000462321 MAP3K4Q9Y6R4 1608 aa29.8■■■□□ 2.36
PTPN18-207ENST00000462321 CCDC141Q6ZP82 1450 aa29.79■■■□□ 2.36
PTPN18-207ENST00000462321 RSPH4AQ5TD94 716 aa29.79■■■□□ 2.36
PTPN18-207ENST00000462321 HFM1A2PYH4 1435 aa29.79■■■□□ 2.36
PTPN18-207ENST00000462321 SETD5Q9C0A6 1442 aa29.77■■■□□ 2.36
PTPN18-207ENST00000462321 ROCK1Q13464 1354 aa29.77■■■□□ 2.36
PTPN18-207ENST00000462321 HNRNPMP52272 730 aaKnown RBP eCLIP29.77■■■□□ 2.36
PTPN18-207ENST00000462321 CFAP74Q9C0B2 1584 aa29.76■■■□□ 2.35
PTPN18-207ENST00000462321 ARHGEF12Q9NZN5 1544 aa29.75■■■□□ 2.35
PTPN18-207ENST00000462321 FAM69CQ0P6D2 419 aa29.74■■■□□ 2.35
PTPN18-207ENST00000462321 CHIC2Q9UKJ5 165 aa29.74■■■□□ 2.35
PTPN18-207ENST00000462321 ADGRL2O95490 1459 aa29.73■■■□□ 2.35
PTPN18-207ENST00000462321 NAIPQ13075 1403 aa29.71■■■□□ 2.35
PTPN18-207ENST00000462321 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
PTPN18-207ENST00000462321 RAB3GAP2Q9H2M9 1393 aa29.7■■■□□ 2.35
PTPN18-207ENST00000462321 ADGRL1O94910 1474 aa29.7■■■□□ 2.35
PTPN18-207ENST00000462321 NEO1Q92859 1461 aa29.7■■■□□ 2.34
PTPN18-207ENST00000462321 ADGBQ8N7X0 1667 aa29.7■■■□□ 2.34
PTPN18-207ENST00000462321 TSPY4P0CV99 314 aa29.69■■■□□ 2.34
PTPN18-207ENST00000462321 TSPY10P0CW01 314 aa29.69■■■□□ 2.34
PTPN18-207ENST00000462321 GCC2Q8IWJ2 1684 aa29.67■■■□□ 2.34
PTPN18-207ENST00000462321 MAST1Q9Y2H9 1570 aa29.67■■■□□ 2.34
PTPN18-207ENST00000462321 NCOA1Q15788 1441 aa29.66■■■□□ 2.34
PTPN18-207ENST00000462321 HRCP23327 699 aa29.65■■■□□ 2.34
PTPN18-207ENST00000462321 RRP7BPQ9NSQ0 103 aa29.65■■■□□ 2.34
PTPN18-207ENST00000462321 ANKRD30AQ9BXX3 1397 aa29.65■■■□□ 2.34
PTPN18-207ENST00000462321 TRAPPC8Q9Y2L5 1435 aa29.65■■■□□ 2.34
PTPN18-207ENST00000462321 SCAPERQ9BY12 1400 aa29.64■■■□□ 2.34
PTPN18-207ENST00000462321 KIF13AQ9H1H9 1805 aa29.62■■■□□ 2.33
PTPN18-207ENST00000462321 TEX14Q8IWB6 1497 aa29.58■■■□□ 2.33
PTPN18-207ENST00000462321 PPRC1Q5VV67 1664 aaKnown RBP29.56■■■□□ 2.32
PTPN18-207ENST00000462321 ZNF518AQ6AHZ1 1483 aa29.56■■■□□ 2.32
PTPN18-207ENST00000462321 PLXNC1O60486 1568 aa29.55■■■□□ 2.32
PTPN18-207ENST00000462321 RTEL1-TNFRSF6BF6WH68 1400 aa29.54■■■□□ 2.32
PTPN18-207ENST00000462321 POGZQ7Z3K3 1410 aa29.54■■■□□ 2.32
PTPN18-207ENST00000462321 AFAP1Q8N556 730 aa29.54■■■□□ 2.32
PTPN18-207ENST00000462321 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
PTPN18-207ENST00000462321 KIF15Q9NS87 1388 aa29.53■■■□□ 2.32
PTPN18-207ENST00000462321 SPAG9O60271 1321 aaKnown RBP29.52■■■□□ 2.32
PTPN18-207ENST00000462321 ZFYVE16Q7Z3T8 1539 aa29.51■■■□□ 2.32
PTPN18-207ENST00000462321 DENND4BO75064 1496 aaPredicted RBP29.5■■■□□ 2.31
PTPN18-207ENST00000462321 KDM6BO15054 1643 aa29.5■■■□□ 2.31
PTPN18-207ENST00000462321 KDM5CP41229 1560 aa29.49■■■□□ 2.31
PTPN18-207ENST00000462321 INO80Q9ULG1 1556 aaPredicted RBP29.49■■■□□ 2.31
PTPN18-207ENST00000462321 DHX57Q6P158 1386 aaKnown RBP29.48■■■□□ 2.31
PTPN18-207ENST00000462321 TSPOAP1O95153 1857 aa29.48■■■□□ 2.31
PTPN18-207ENST00000462321 ANKRD50Q9ULJ7 1429 aa29.48■■■□□ 2.31
PTPN18-207ENST00000462321 ACIN1Q9UKV3 1341 aaKnown RBP29.47■■■□□ 2.31
PTPN18-207ENST00000462321 ATP7AQ04656 1500 aa29.46■■■□□ 2.31
PTPN18-207ENST00000462321 DUOX2Q9NRD8 1548 aa29.42■■■□□ 2.3
PTPN18-207ENST00000462321 MLH3Q9UHC1 1453 aa29.41■■■□□ 2.3
PTPN18-207ENST00000462321 RICTORQ6R327 1708 aa29.39■■■□□ 2.3
PTPN18-207ENST00000462321 HECW2Q9P2P5 1572 aa29.38■■■□□ 2.29
PTPN18-207ENST00000462321 ERBINQ96RT1 1412 aa29.38■■■□□ 2.29
PTPN18-207ENST00000462321 RAPGEF3O95398 923 aa29.37■■■□□ 2.29
PTPN18-207ENST00000462321 KIDINS220Q9ULH0 1771 aa29.37■■■□□ 2.29
PTPN18-207ENST00000462321 FRMPD1Q5SYB0 1578 aa29.35■■■□□ 2.29
PTPN18-207ENST00000462321 CLSPNQ9HAW4 1339 aa29.35■■■□□ 2.29
PTPN18-207ENST00000462321 MYT1LQ9UL68 1186 aa29.33■■■□□ 2.29
PTPN18-207ENST00000462321 ZMYM4Q5VZL5 1548 aa29.32■■■□□ 2.28
PTPN18-207ENST00000462321 TRHP20396 242 aaPredicted RBP29.32■■■□□ 2.28
PTPN18-207ENST00000462321 TRIM52Q96A61 297 aa29.31■■■□□ 2.28
PTPN18-207ENST00000462321 ZEB1P37275 1124 aaPredicted RBP29.28■■■□□ 2.28
PTPN18-207ENST00000462321 DHX29Q7Z478 1369 aaKnown RBP29.27■■■□□ 2.28
PTPN18-207ENST00000462321 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
PTPN18-207ENST00000462321 MAGI2Q86UL8 1455 aa29.25■■■□□ 2.27
PTPN18-207ENST00000462321 ABCA6Q8N139 1617 aa29.25■■■□□ 2.27
PTPN18-207ENST00000462321 UNC13BO14795 1591 aa29.24■■■□□ 2.27
PTPN18-207ENST00000462321 COL17A1Q9UMD9 1497 aaPredicted RBP29.24■■■□□ 2.27
PTPN18-207ENST00000462321 A2MP01023 1474 aa29.23■■■□□ 2.27
PTPN18-207ENST00000462321 PZPP20742 1482 aa29.22■■■□□ 2.27
PTPN18-207ENST00000462321 DIP2CQ9Y2E4 1556 aa29.22■■■□□ 2.27
PTPN18-207ENST00000462321 EIF2AK4Q9P2K8 1649 aaKnown RBP29.22■■■□□ 2.27
PTPN18-207ENST00000462321 MPHOSPH9Q99550 1183 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms