RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 MAMSTRQ6ZN01 415 aa13.89□□□□□ -0.19
CALD1-213ENST00000462181 TMC2Q8TDI7 906 aa13.88□□□□□ -0.19
CALD1-213ENST00000462181 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
CALD1-213ENST00000462181 LHX8Q68G74 356 aa13.86□□□□□ -0.19
CALD1-213ENST00000462181 WDR70Q9NW82 654 aa13.86□□□□□ -0.19
CALD1-213ENST00000462181 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
CALD1-213ENST00000462181 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
CALD1-213ENST00000462181 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
CALD1-213ENST00000462181 CRISPLD2Q9H0B8 497 aa13.85□□□□□ -0.19
CALD1-213ENST00000462181 GPHNQ9NQX3 736 aaPredicted RBP13.84□□□□□ -0.19
CALD1-213ENST00000462181 C2orf72A6NCS6 295 aa13.81□□□□□ -0.2
CALD1-213ENST00000462181 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
CALD1-213ENST00000462181 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
CALD1-213ENST00000462181 KIF3CO14782 793 aa13.78□□□□□ -0.2
CALD1-213ENST00000462181 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
CALD1-213ENST00000462181 MFSD10Q14728 455 aa13.76□□□□□ -0.21
CALD1-213ENST00000462181 FOXK1P85037 733 aa13.75□□□□□ -0.21
CALD1-213ENST00000462181 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
CALD1-213ENST00000462181 DSG2Q14126 1118 aa13.74□□□□□ -0.21
CALD1-213ENST00000462181 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
CALD1-213ENST00000462181 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
CALD1-213ENST00000462181 E2F4Q16254 413 aa13.68□□□□□ -0.22
CALD1-213ENST00000462181 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
CALD1-213ENST00000462181 CAMK2BQ13554 666 aa13.6□□□□□ -0.23
CALD1-213ENST00000462181 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
CALD1-213ENST00000462181 SNPHO15079 494 aa13.57□□□□□ -0.24
CALD1-213ENST00000462181 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
CALD1-213ENST00000462181 EMILIN3Q9NT22 766 aa13.55□□□□□ -0.24
CALD1-213ENST00000462181 UPF1Q92900 1129 aaKnown RBP eCLIP13.54□□□□□ -0.24
CALD1-213ENST00000462181 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
CALD1-213ENST00000462181 SLC34A2O95436 690 aa13.53□□□□□ -0.24
CALD1-213ENST00000462181 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
CALD1-213ENST00000462181 TBC1D12O60347 775 aa13.52□□□□□ -0.25
CALD1-213ENST00000462181 HOXB3P14651 431 aaPredicted RBP13.51□□□□□ -0.25
CALD1-213ENST00000462181 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
CALD1-213ENST00000462181 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
CALD1-213ENST00000462181 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
CALD1-213ENST00000462181 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
CALD1-213ENST00000462181 ARIH1Q9Y4X5 557 aaPredicted RBP13.49□□□□□ -0.25
CALD1-213ENST00000462181 DPYSL4O14531 572 aa13.48□□□□□ -0.25
CALD1-213ENST00000462181 PCDHGA4Q9Y5G9 962 aa13.46□□□□□ -0.25
CALD1-213ENST00000462181 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
CALD1-213ENST00000462181 NBR1Q14596 966 aa13.43□□□□□ -0.26
CALD1-213ENST00000462181 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
CALD1-213ENST00000462181 SPDYE16A6NNV3 312 aaPredicted RBP13.41□□□□□ -0.26
CALD1-213ENST00000462181 GPR153Q6NV75 609 aa13.4□□□□□ -0.26
CALD1-213ENST00000462181 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
CALD1-213ENST00000462181 EVI5O60447 810 aa13.39□□□□□ -0.27
CALD1-213ENST00000462181 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
CALD1-213ENST00000462181 BCANQ96GW7 911 aa13.38□□□□□ -0.27
CALD1-213ENST00000462181 PDIA6Q15084 440 aa13.37□□□□□ -0.27
CALD1-213ENST00000462181 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
CALD1-213ENST00000462181 NUDT7P0C024 238 aa13.36□□□□□ -0.27
CALD1-213ENST00000462181 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
CALD1-213ENST00000462181 SEMA3EO15041 775 aa13.33□□□□□ -0.28
CALD1-213ENST00000462181 ST18O60284 1047 aa13.33□□□□□ -0.28
CALD1-213ENST00000462181 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
CALD1-213ENST00000462181 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
CALD1-213ENST00000462181 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
CALD1-213ENST00000462181 PTGER2P43116 358 aa13.26□□□□□ -0.29
CALD1-213ENST00000462181 DDX12PQ92771 950 aa13.26□□□□□ -0.29
CALD1-213ENST00000462181 GRXCR2A6NFK2 248 aa13.25□□□□□ -0.29
CALD1-213ENST00000462181 SMYD5Q6GMV2 418 aa13.25□□□□□ -0.29
CALD1-213ENST00000462181 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
CALD1-213ENST00000462181 TULP1O00294 542 aaPredicted RBP13.24□□□□□ -0.29
CALD1-213ENST00000462181 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
CALD1-213ENST00000462181 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
CALD1-213ENST00000462181 EMP3P54852 163 aa13.22□□□□□ -0.29
CALD1-213ENST00000462181 ERBB3P21860 1342 aa13.2□□□□□ -0.3
CALD1-213ENST00000462181 PHF14O94880 888 aa13.2□□□□□ -0.3
CALD1-213ENST00000462181 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
CALD1-213ENST00000462181 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
CALD1-213ENST00000462181 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
CALD1-213ENST00000462181 LCE2DQ5TA82 110 aaPredicted RBP13.18□□□□□ -0.3
CALD1-213ENST00000462181 EPAS1Q99814 870 aa13.18□□□□□ -0.3
CALD1-213ENST00000462181 FOSBP53539 338 aa13.17□□□□□ -0.3
CALD1-213ENST00000462181 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
CALD1-213ENST00000462181 FAM205CA6NFA0 338 aa13.15□□□□□ -0.3
CALD1-213ENST00000462181 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
CALD1-213ENST00000462181 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
CALD1-213ENST00000462181 OSBPP22059 807 aa13.14□□□□□ -0.31
CALD1-213ENST00000462181 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
CALD1-213ENST00000462181 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
CALD1-213ENST00000462181 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
CALD1-213ENST00000462181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
CALD1-213ENST00000462181 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
CALD1-213ENST00000462181 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
CALD1-213ENST00000462181 MAP3K7O43318 606 aa13.08□□□□□ -0.32
CALD1-213ENST00000462181 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
CALD1-213ENST00000462181 LMOD2Q6P5Q4 547 aa13.08□□□□□ -0.32
CALD1-213ENST00000462181 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
CALD1-213ENST00000462181 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
CALD1-213ENST00000462181 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
CALD1-213ENST00000462181 NUTM2FA1L443 756 aa13.04□□□□□ -0.32
CALD1-213ENST00000462181 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
CALD1-213ENST00000462181 C6orf132Q5T0Z8 1188 aa13.03□□□□□ -0.32
CALD1-213ENST00000462181 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
CALD1-213ENST00000462181 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
CALD1-213ENST00000462181 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
CALD1-213ENST00000462181 PTPREP23469 700 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms