RNA–Protein interactions for RNA: ENST00000462080.1

GPCPD1-203, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-203ENST00000462080 RIMBP2O15034 1052 aa15.86■□□□□ 0.13
GPCPD1-203ENST00000462080 HOXB1P14653 301 aaPredicted RBP15.85■□□□□ 0.13
GPCPD1-203ENST00000462080 FAM205CA6NFA0 338 aa15.82■□□□□ 0.12
GPCPD1-203ENST00000462080 PPP1R37O75864 691 aa15.81■□□□□ 0.12
GPCPD1-203ENST00000462080 HS3ST6Q96QI5 342 aa15.81■□□□□ 0.12
GPCPD1-203ENST00000462080 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
GPCPD1-203ENST00000462080 KIF3CO14782 793 aa15.78■□□□□ 0.12
GPCPD1-203ENST00000462080 POTEB3A0JP26 581 aa15.77■□□□□ 0.12
GPCPD1-203ENST00000462080 C2orf72A6NCS6 295 aa15.77■□□□□ 0.12
GPCPD1-203ENST00000462080 POTEBQ6S5H4 581 aa15.77■□□□□ 0.12
GPCPD1-203ENST00000462080 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
GPCPD1-203ENST00000462080 GPR153Q6NV75 609 aa15.72■□□□□ 0.11
GPCPD1-203ENST00000462080 NKX1-1Q15270 411 aaPredicted RBP15.71■□□□□ 0.11
GPCPD1-203ENST00000462080 TMC2Q8TDI7 906 aa15.71■□□□□ 0.11
GPCPD1-203ENST00000462080 ERBB3P21860 1342 aa15.7■□□□□ 0.1
GPCPD1-203ENST00000462080 ARSIQ5FYB1 569 aa15.65■□□□□ 0.1
GPCPD1-203ENST00000462080 RYDENQ9NUL5 291 aaKnown RBP15.65■□□□□ 0.1
GPCPD1-203ENST00000462080 KRTAP3-3Q9BYR6 98 aa15.64■□□□□ 0.09
GPCPD1-203ENST00000462080 KRTAP3-2Q9BYR7 98 aa15.64■□□□□ 0.09
GPCPD1-203ENST00000462080 DCAF8L2P0C7V8 631 aa15.62■□□□□ 0.09
GPCPD1-203ENST00000462080 VARS2Q5ST30 1063 aaKnown RBP15.62■□□□□ 0.09
GPCPD1-203ENST00000462080 SPNS2Q8IVW8 549 aa15.6■□□□□ 0.09
GPCPD1-203ENST00000462080 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.092e-12■□□□□ 9.6
GPCPD1-203ENST00000462080 SLC34A2O95436 690 aa15.57■□□□□ 0.08
GPCPD1-203ENST00000462080 GPHNQ9NQX3 736 aaPredicted RBP15.54■□□□□ 0.08
GPCPD1-203ENST00000462080 FOXK1P85037 733 aa15.52■□□□□ 0.08
GPCPD1-203ENST00000462080 MMRN1Q13201 1228 aa15.52■□□□□ 0.08
GPCPD1-203ENST00000462080 PCDHGA4Q9Y5G9 962 aa15.52■□□□□ 0.08
GPCPD1-203ENST00000462080 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
GPCPD1-203ENST00000462080 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
GPCPD1-203ENST00000462080 NUDT7P0C024 238 aa15.5■□□□□ 0.07
GPCPD1-203ENST00000462080 ZNF687Q8N1G0 1237 aa15.5■□□□□ 0.07
GPCPD1-203ENST00000462080 PLPP6Q8IY26 295 aa15.49■□□□□ 0.07
GPCPD1-203ENST00000462080 DSG2Q14126 1118 aa15.47■□□□□ 0.07
GPCPD1-203ENST00000462080 PTCD2Q8WV60 388 aaKnown RBP15.43■□□□□ 0.06
GPCPD1-203ENST00000462080 CRISPLD2Q9H0B8 497 aa15.42■□□□□ 0.06
GPCPD1-203ENST00000462080 LHX6Q9UPM6 363 aa15.41■□□□□ 0.06
GPCPD1-203ENST00000462080 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
GPCPD1-203ENST00000462080 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
GPCPD1-203ENST00000462080 KDM4FA0A1W2PPD8 638 aa15.34■□□□□ 0.05
GPCPD1-203ENST00000462080 PDE4AP27815 886 aa15.33■□□□□ 0.04
GPCPD1-203ENST00000462080 PPP1R15BQ5SWA1 713 aa15.33■□□□□ 0.04
GPCPD1-203ENST00000462080 TBC1D12O60347 775 aa15.32■□□□□ 0.04
GPCPD1-203ENST00000462080 PSDA5PKW4 1024 aaPredicted RBP15.3■□□□□ 0.04
GPCPD1-203ENST00000462080 PBX2P40425 430 aa15.29■□□□□ 0.04
GPCPD1-203ENST00000462080 OXER1Q8TDS5 423 aa15.28■□□□□ 0.04
GPCPD1-203ENST00000462080 UPF1Q92900 1129 aaKnown RBP eCLIP15.27■□□□□ 0.04
GPCPD1-203ENST00000462080 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
GPCPD1-203ENST00000462080 LSM11P83369 360 aaKnown RBP eCLIP15.26■□□□□ 0.03
GPCPD1-203ENST00000462080 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
GPCPD1-203ENST00000462080 LARP6Q9BRS8 491 aaKnown RBP15.26■□□□□ 0.03
GPCPD1-203ENST00000462080 POTEEQ6S8J3 1075 aa15.24■□□□□ 0.03
GPCPD1-203ENST00000462080 BBXQ8WY36 941 aaPredicted RBP15.24■□□□□ 0.03
GPCPD1-203ENST00000462080 DDX27Q96GQ7 796 aaKnown RBP15.24■□□□□ 0.03
GPCPD1-203ENST00000462080 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
GPCPD1-203ENST00000462080 MFSD10Q14728 455 aa15.21■□□□□ 0.03
GPCPD1-203ENST00000462080 PTGER2P43116 358 aa15.2■□□□□ 0.02
GPCPD1-203ENST00000462080 RNF166Q96A37 237 aaPredicted RBP15.2■□□□□ 0.02
GPCPD1-203ENST00000462080 MYT1LQ9UL68 1186 aa15.2■□□□□ 0.02
GPCPD1-203ENST00000462080 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
GPCPD1-203ENST00000462080 PPP4R3BQ5MIZ7 849 aa15.18■□□□□ 0.02
GPCPD1-203ENST00000462080 ARHGAP33O14559 1287 aa15.16■□□□□ 0.02
GPCPD1-203ENST00000462080 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.09■□□□□ 0.01
GPCPD1-203ENST00000462080 EVI5O60447 810 aa15.08■□□□□ 0
GPCPD1-203ENST00000462080 PSEN2P49810 448 aa15.08■□□□□ 0
GPCPD1-203ENST00000462080 ZNF454Q8N9F8 522 aa15.08■□□□□ 0
GPCPD1-203ENST00000462080 ADGRD1Q6QNK2 874 aa15.07■□□□□ 0
GPCPD1-203ENST00000462080 SPRYD3Q8NCJ5 442 aa15.07■□□□□ 0
GPCPD1-203ENST00000462080 ANO8Q9HCE9 1232 aaPredicted RBP15.07■□□□□ 0
GPCPD1-203ENST00000462080 EMILIN3Q9NT22 766 aa15.07■□□□□ 0
GPCPD1-203ENST00000462080 MAP3K9P80192 1104 aa15.06■□□□□ 0
GPCPD1-203ENST00000462080 DMRTA1Q5VZB9 504 aa15.06■□□□□ 0
GPCPD1-203ENST00000462080 TK2O00142 265 aa15.03■□□□□ -0
GPCPD1-203ENST00000462080 FOSBP53539 338 aa15.03■□□□□ -0
GPCPD1-203ENST00000462080 KCNH8Q96L42 1107 aa15.03■□□□□ -0
GPCPD1-203ENST00000462080 KCNK17Q96T54 332 aa15.03■□□□□ -0
GPCPD1-203ENST00000462080 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
GPCPD1-203ENST00000462080 BCL2L12Q9HB09 334 aa15□□□□□ -0.01
GPCPD1-203ENST00000462080 CAMK2BQ13554 666 aa14.98□□□□□ -0.01
GPCPD1-203ENST00000462080 HRO43593 1189 aa14.95□□□□□ -0.02
GPCPD1-203ENST00000462080 PAXIP1Q6ZW49 1069 aaPredicted RBP14.95□□□□□ -0.02
GPCPD1-203ENST00000462080 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
GPCPD1-203ENST00000462080 ZDHHC16Q969W1 377 aa14.94□□□□□ -0.02
GPCPD1-203ENST00000462080 PTPREP23469 700 aa14.93□□□□□ -0.02
GPCPD1-203ENST00000462080 ADAM33Q9BZ11 813 aa14.91□□□□□ -0.02
GPCPD1-203ENST00000462080 DPYSL4O14531 572 aa14.9□□□□□ -0.02
GPCPD1-203ENST00000462080 VPS9D1Q9Y2B5 631 aa14.89□□□□□ -0.03
GPCPD1-203ENST00000462080 SLC4A5Q9BY07 1137 aa14.88□□□□□ -0.03
GPCPD1-203ENST00000462080 PCDHGA10Q9Y5H3 936 aa14.88□□□□□ -0.03
GPCPD1-203ENST00000462080 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
GPCPD1-203ENST00000462080 PHF14O94880 888 aa14.84□□□□□ -0.03
GPCPD1-203ENST00000462080 TYW1BQ6NUM6 668 aa14.83□□□□□ -0.04
GPCPD1-203ENST00000462080 ZBED2Q9BTP6 218 aa14.83□□□□□ -0.04
GPCPD1-203ENST00000462080 FBXW7Q969H0 707 aa14.82□□□□□ -0.04
GPCPD1-203ENST00000462080 HCSTQ9UBK5 93 aa14.81□□□□□ -0.04
GPCPD1-203ENST00000462080 PPP1R3GB7ZBB8 358 aa14.78□□□□□ -0.04
GPCPD1-203ENST00000462080 KCTD12Q96CX2 325 aaKnown RBP14.78□□□□□ -0.04
GPCPD1-203ENST00000462080 E2F4Q16254 413 aa14.77□□□□□ -0.05
GPCPD1-203ENST00000462080 WDR70Q9NW82 654 aa14.77□□□□□ -0.05
GPCPD1-203ENST00000462080 BHMG1C9JSJ3 638 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms