RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
SSB-206ENST00000461708 CLIP1P30622 1438 aa29.26■■■□□ 2.27
SSB-206ENST00000461708 MADDQ8WXG6 1647 aa29.24■■■□□ 2.27
SSB-206ENST00000461708 LRRIQ1Q96JM4 1722 aa29.23■■■□□ 2.27
SSB-206ENST00000461708 CASKIN1Q8WXD9 1431 aa29.23■■■□□ 2.27
SSB-206ENST00000461708 YEATS2Q9ULM3 1422 aa29.21■■■□□ 2.27
SSB-206ENST00000461708 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.26
SSB-206ENST00000461708 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
SSB-206ENST00000461708 ARHGAP5Q13017 1502 aa29.14■■■□□ 2.25
SSB-206ENST00000461708 ZNF518AQ6AHZ1 1483 aa29.13■■■□□ 2.25
SSB-206ENST00000461708 ATP10AO60312 1499 aa29.12■■■□□ 2.25
SSB-206ENST00000461708 SIGLEC1Q9BZZ2 1709 aa29.12■■■□□ 2.25
SSB-206ENST00000461708 RIMS1Q86UR5 1692 aaKnown RBP29.12■■■□□ 2.25
SSB-206ENST00000461708 FYCO1Q9BQS8 1478 aa29.11■■■□□ 2.25
SSB-206ENST00000461708 KDM5CP41229 1560 aa29.09■■■□□ 2.25
SSB-206ENST00000461708 ILDR1Q86SU0 546 aaPredicted RBP29.08■■■□□ 2.25
SSB-206ENST00000461708 CDC42BPBQ9Y5S2 1711 aa29.08■■■□□ 2.25
SSB-206ENST00000461708 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
SSB-206ENST00000461708 PREX2Q70Z35 1606 aa29.05■■■□□ 2.24
SSB-206ENST00000461708 LMTK3Q96Q04 1460 aa29.04■■■□□ 2.24
SSB-206ENST00000461708 AFAP1Q8N556 730 aa29.02■■■□□ 2.24
SSB-206ENST00000461708 ARHGEF12Q9NZN5 1544 aa29.01■■■□□ 2.23
SSB-206ENST00000461708 FER1L4A9Z1Z3 1794 aa29.01■■■□□ 2.23
SSB-206ENST00000461708 MLH3Q9UHC1 1453 aa28.99■■■□□ 2.23
SSB-206ENST00000461708 ABCC1P33527 1531 aa28.99■■■□□ 2.23
SSB-206ENST00000461708 REREQ9P2R6 1566 aa28.97■■■□□ 2.23
SSB-206ENST00000461708 MLECQ14165 292 aa28.96■■■□□ 2.23
SSB-206ENST00000461708 CDC42BPAQ5VT25 1732 aa28.96■■■□□ 2.23
SSB-206ENST00000461708 DIP2CQ9Y2E4 1556 aa28.94■■■□□ 2.22
SSB-206ENST00000461708 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
SSB-206ENST00000461708 TRAPPC8Q9Y2L5 1435 aa28.92■■■□□ 2.22
SSB-206ENST00000461708 ABCA6Q8N139 1617 aa28.88■■■□□ 2.21
SSB-206ENST00000461708 MYT1LQ9UL68 1186 aa28.88■■■□□ 2.21
SSB-206ENST00000461708 AGLP35573 1532 aa28.88■■■□□ 2.21
SSB-206ENST00000461708 GPATCH8Q9UKJ3 1502 aaKnown RBP28.88■■■□□ 2.21
SSB-206ENST00000461708 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
SSB-206ENST00000461708 PLPPR3Q6T4P5 718 aa28.82■■■□□ 2.2
SSB-206ENST00000461708 SAMD9LQ8IVG5 1584 aa28.82■■■□□ 2.2
SSB-206ENST00000461708 KIAA1107Q9UPP5 1409 aa28.8■■■□□ 2.2
SSB-206ENST00000461708 HSPA2P54652 639 aa28.8■■■□□ 2.2
SSB-206ENST00000461708 SETD1BQ9UPS6 1966 aaKnown RBP28.8■■■□□ 2.2
SSB-206ENST00000461708 PLEKHH2Q8IVE3 1493 aa28.79■■■□□ 2.2
SSB-206ENST00000461708 PREX1Q8TCU6 1659 aa28.79■■■□□ 2.2
SSB-206ENST00000461708 MTUS2Q5JR59 1369 aa28.78■■■□□ 2.2
SSB-206ENST00000461708 ZNF777Q9ULD5 760 aaPredicted RBP28.77■■■□□ 2.2
SSB-206ENST00000461708 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.2
SSB-206ENST00000461708 SYCP2Q9BX26 1530 aa28.76■■■□□ 2.19
SSB-206ENST00000461708 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
SSB-206ENST00000461708 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
SSB-206ENST00000461708 CEP162Q5TB80 1403 aa28.75■■■□□ 2.19
SSB-206ENST00000461708 CEBPAP49715 358 aaPredicted RBP28.74■■■□□ 2.19
SSB-206ENST00000461708 SPAG9O60271 1321 aaKnown RBP28.72■■■□□ 2.19
SSB-206ENST00000461708 EHBP1L1Q8N3D4 1523 aa28.71■■■□□ 2.19
SSB-206ENST00000461708 HNRNPMP52272 730 aaKnown RBP eCLIP28.71■■■□□ 2.19
SSB-206ENST00000461708 CNTLNQ9NXG0 1405 aa28.7■■■□□ 2.19
SSB-206ENST00000461708 ESF1Q9H501 851 aaKnown RBP28.69■■■□□ 2.18
SSB-206ENST00000461708 C3P01024 1663 aa28.67■■■□□ 2.18
SSB-206ENST00000461708 ATP7AQ04656 1500 aa28.67■■■□□ 2.18
SSB-206ENST00000461708 INO80Q9ULG1 1556 aaPredicted RBP28.67■■■□□ 2.18
SSB-206ENST00000461708 UHRF1BP1Q6BDS2 1440 aa28.66■■■□□ 2.18
SSB-206ENST00000461708 TIAM1Q13009 1591 aa28.66■■■□□ 2.18
SSB-206ENST00000461708 PLXNC1O60486 1568 aa28.62■■■□□ 2.17
SSB-206ENST00000461708 MROH2AA6NES4 1674 aa28.6■■■□□ 2.17
SSB-206ENST00000461708 A2MP01023 1474 aa28.59■■■□□ 2.17
SSB-206ENST00000461708 DMRT2Q9Y5R5 561 aa28.59■■■□□ 2.17
SSB-206ENST00000461708 MBD5Q9P267 1494 aa28.59■■■□□ 2.17
SSB-206ENST00000461708 SUPT6HQ7KZ85 1726 aaKnown RBP28.57■■■□□ 2.16
SSB-206ENST00000461708 STRCQ7RTU9 1775 aa28.55■■■□□ 2.16
SSB-206ENST00000461708 NPATQ14207 1427 aa28.55■■■□□ 2.16
SSB-206ENST00000461708 ZNF644Q9H582 1327 aaPredicted RBP28.55■■■□□ 2.16
SSB-206ENST00000461708 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
SSB-206ENST00000461708 RTEL1-TNFRSF6BF6WH68 1400 aa28.54■■■□□ 2.16
SSB-206ENST00000461708 PPP6R1Q9UPN7 881 aa28.52■■■□□ 2.16
SSB-206ENST00000461708 NCOA2Q15596 1464 aa28.52■■■□□ 2.16
SSB-206ENST00000461708 ZMYM3Q14202 1370 aa28.51■■■□□ 2.16
SSB-206ENST00000461708 CERKQ8TCT0 537 aa28.5■■■□□ 2.15
SSB-206ENST00000461708 RSPH4AQ5TD94 716 aa28.49■■■□□ 2.15
SSB-206ENST00000461708 VPS8Q8N3P4 1428 aa28.48■■■□□ 2.15
SSB-206ENST00000461708 PTPRTO14522 1441 aa28.46■■■□□ 2.15
SSB-206ENST00000461708 CCDC141Q6ZP82 1450 aa28.45■■■□□ 2.14
SSB-206ENST00000461708 CLTCQ00610 1675 aaKnown RBP28.45■■■□□ 2.14
SSB-206ENST00000461708 CAMSAP2Q08AD1 1489 aa28.43■■■□□ 2.14
SSB-206ENST00000461708 DHX29Q7Z478 1369 aaKnown RBP28.43■■■□□ 2.14
SSB-206ENST00000461708 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
SSB-206ENST00000461708 GGT6Q6P531 493 aa28.42■■■□□ 2.14
SSB-206ENST00000461708 MAP3K1Q13233 1512 aa28.41■■■□□ 2.14
SSB-206ENST00000461708 NCOA1Q15788 1441 aa28.41■■■□□ 2.14
SSB-206ENST00000461708 LRRC9Q6ZRR7 1453 aa28.4■■■□□ 2.14
SSB-206ENST00000461708 PTPRKQ15262 1439 aa28.39■■■□□ 2.14
SSB-206ENST00000461708 ARHGEF5Q12774 1597 aa28.38■■■□□ 2.13
SSB-206ENST00000461708 FAM135AQ9P2D6 1515 aa28.35■■■□□ 2.13
SSB-206ENST00000461708 ZNF142P52746 1687 aaPredicted RBP28.35■■■□□ 2.13
SSB-206ENST00000461708 CAMSAP1Q5T5Y3 1602 aa28.32■■■□□ 2.12
SSB-206ENST00000461708 MYO3AQ8NEV4 1616 aa28.32■■■□□ 2.12
SSB-206ENST00000461708 TSPY4P0CV99 314 aa28.3■■■□□ 2.12
SSB-206ENST00000461708 TSPY10P0CW01 314 aa28.3■■■□□ 2.12
SSB-206ENST00000461708 PLA2R1Q13018 1463 aa28.29■■■□□ 2.12
SSB-206ENST00000461708 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
SSB-206ENST00000461708 KIF3BO15066 747 aa28.28■■■□□ 2.12
SSB-206ENST00000461708 MIA2Q96PC5 1412 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms