RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
MRPL28-207ENST00000461550 CDC42BPBQ9Y5S2 1711 aa28.07■■■□□ 2.08
MRPL28-207ENST00000461550 ZMYM4Q5VZL5 1548 aa28.07■■■□□ 2.08
MRPL28-207ENST00000461550 POGZQ7Z3K3 1410 aa28.06■■■□□ 2.08
MRPL28-207ENST00000461550 PREX2Q70Z35 1606 aa28.04■■■□□ 2.08
MRPL28-207ENST00000461550 YEATS2Q9ULM3 1422 aa28.02■■■□□ 2.08
MRPL28-207ENST00000461550 ZFYVE16Q7Z3T8 1539 aa28.02■■■□□ 2.08
MRPL28-207ENST00000461550 CDC42BPAQ5VT25 1732 aa28.01■■■□□ 2.07
MRPL28-207ENST00000461550 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
MRPL28-207ENST00000461550 BCORL1Q5H9F3 1711 aa27.97■■■□□ 2.07
MRPL28-207ENST00000461550 SIGLEC1Q9BZZ2 1709 aa27.97■■■□□ 2.07
MRPL28-207ENST00000461550 ADAMTSL3P82987 1691 aa27.97■■■□□ 2.07
MRPL28-207ENST00000461550 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.06
MRPL28-207ENST00000461550 MTUS2Q5JR59 1369 aa27.93■■■□□ 2.06
MRPL28-207ENST00000461550 ZNF518AQ6AHZ1 1483 aa27.92■■■□□ 2.06
MRPL28-207ENST00000461550 ABCC1P33527 1531 aa27.92■■■□□ 2.06
MRPL28-207ENST00000461550 AFAP1Q8N556 730 aa27.91■■■□□ 2.06
MRPL28-207ENST00000461550 MADDQ8WXG6 1647 aa27.91■■■□□ 2.06
MRPL28-207ENST00000461550 ITSN2Q9NZM3 1697 aa27.9■■■□□ 2.06
MRPL28-207ENST00000461550 ARHGEF12Q9NZN5 1544 aa27.9■■■□□ 2.06
MRPL28-207ENST00000461550 KDM5CP41229 1560 aa27.89■■■□□ 2.06
MRPL28-207ENST00000461550 GPATCH8Q9UKJ3 1502 aaKnown RBP27.88■■■□□ 2.05
MRPL28-207ENST00000461550 TRAPPC8Q9Y2L5 1435 aa27.87■■■□□ 2.05
MRPL28-207ENST00000461550 ZNF777Q9ULD5 760 aaPredicted RBP27.86■■■□□ 2.05
MRPL28-207ENST00000461550 SAMD9LQ8IVG5 1584 aa27.86■■■□□ 2.05
MRPL28-207ENST00000461550 PTPRMP28827 1452 aa27.86■■■□□ 2.05
MRPL28-207ENST00000461550 EHBP1L1Q8N3D4 1523 aa27.85■■■□□ 2.05
MRPL28-207ENST00000461550 HECW2Q9P2P5 1572 aa27.85■■■□□ 2.05
MRPL28-207ENST00000461550 MYT1LQ9UL68 1186 aa27.83■■■□□ 2.05
MRPL28-207ENST00000461550 ATP10AO60312 1499 aa27.83■■■□□ 2.05
MRPL28-207ENST00000461550 CCNB3Q8WWL7 1395 aa27.83■■■□□ 2.05
MRPL28-207ENST00000461550 RIMS1Q86UR5 1692 aaKnown RBP27.83■■■□□ 2.05
MRPL28-207ENST00000461550 C9orf84Q5VXU9 1444 aa27.81■■■□□ 2.04
MRPL28-207ENST00000461550 VPS8Q8N3P4 1428 aa27.81■■■□□ 2.04
MRPL28-207ENST00000461550 MLECQ14165 292 aa27.81■■■□□ 2.04
MRPL28-207ENST00000461550 SYCP2Q9BX26 1530 aa27.8■■■□□ 2.04
MRPL28-207ENST00000461550 TIAM1Q13009 1591 aa27.79■■■□□ 2.04
MRPL28-207ENST00000461550 DIP2CQ9Y2E4 1556 aa27.79■■■□□ 2.04
MRPL28-207ENST00000461550 ABCA6Q8N139 1617 aa27.79■■■□□ 2.04
MRPL28-207ENST00000461550 CFDP1Q9UEE9 299 aaPredicted RBP27.78■■■□□ 2.04
MRPL28-207ENST00000461550 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.03
MRPL28-207ENST00000461550 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
MRPL28-207ENST00000461550 HNRNPMP52272 730 aaKnown RBP eCLIP27.74■■■□□ 2.033e-8■■■□□ 15.8
MRPL28-207ENST00000461550 FER1L4A9Z1Z3 1794 aa27.74■■■□□ 2.03
MRPL28-207ENST00000461550 SUPT6HQ7KZ85 1726 aaKnown RBP27.72■■■□□ 2.03
MRPL28-207ENST00000461550 PLPPR3Q6T4P5 718 aa27.71■■■□□ 2.03
MRPL28-207ENST00000461550 NCOA2Q15596 1464 aa27.7■■■□□ 2.02
MRPL28-207ENST00000461550 ZNF644Q9H582 1327 aaPredicted RBP27.69■■■□□ 2.02
MRPL28-207ENST00000461550 PLEKHH2Q8IVE3 1493 aa27.68■■■□□ 2.02
MRPL28-207ENST00000461550 REREQ9P2R6 1566 aa27.68■■■□□ 2.02
MRPL28-207ENST00000461550 KIAA1107Q9UPP5 1409 aa27.67■■■□□ 2.02
MRPL28-207ENST00000461550 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
MRPL28-207ENST00000461550 SPAG9O60271 1321 aaKnown RBP27.64■■■□□ 2.02
MRPL28-207ENST00000461550 ATP7AQ04656 1500 aa27.62■■■□□ 2.01
MRPL28-207ENST00000461550 INO80Q9ULG1 1556 aaPredicted RBP27.61■■■□□ 2.01
MRPL28-207ENST00000461550 KANK4Q5T7N3 995 aaPredicted RBP27.6■■■□□ 2.01
MRPL28-207ENST00000461550 AGLP35573 1532 aa27.58■■■□□ 2.01
MRPL28-207ENST00000461550 MBD5Q9P267 1494 aa27.57■■■□□ 2
MRPL28-207ENST00000461550 MAP3K1Q13233 1512 aa27.57■■■□□ 2
MRPL28-207ENST00000461550 CAMSAP2Q08AD1 1489 aa27.56■■■□□ 2
MRPL28-207ENST00000461550 LMTK3Q96Q04 1460 aa27.55■■■□□ 2
MRPL28-207ENST00000461550 CEBPAP49715 358 aaPredicted RBP27.52■■■□□ 2
MRPL28-207ENST00000461550 PLXNC1O60486 1568 aa27.49■■□□□ 1.99
MRPL28-207ENST00000461550 A2MP01023 1474 aa27.48■■□□□ 1.99
MRPL28-207ENST00000461550 CCDC141Q6ZP82 1450 aa27.47■■□□□ 1.99
MRPL28-207ENST00000461550 ADGBQ8N7X0 1667 aa27.47■■□□□ 1.99
MRPL28-207ENST00000461550 C3P01024 1663 aa27.45■■□□□ 1.99
MRPL28-207ENST00000461550 APLP2Q06481 763 aa27.44■■□□□ 1.98
MRPL28-207ENST00000461550 HSPA2P54652 639 aa27.44■■□□□ 1.98
MRPL28-207ENST00000461550 ESF1Q9H501 851 aaKnown RBP27.44■■□□□ 1.98
MRPL28-207ENST00000461550 RTEL1-TNFRSF6BF6WH68 1400 aa27.41■■□□□ 1.98
MRPL28-207ENST00000461550 MYOM3Q5VTT5 1437 aa27.41■■□□□ 1.98
MRPL28-207ENST00000461550 ARHGEF5Q12774 1597 aa27.41■■□□□ 1.98
MRPL28-207ENST00000461550 PREX1Q8TCU6 1659 aa27.4■■□□□ 1.98
MRPL28-207ENST00000461550 CLTCQ00610 1675 aaKnown RBP27.36■■□□□ 1.97
MRPL28-207ENST00000461550 CNTLNQ9NXG0 1405 aa27.36■■□□□ 1.97
MRPL28-207ENST00000461550 RSPH4AQ5TD94 716 aa27.35■■□□□ 1.97
MRPL28-207ENST00000461550 GGT6Q6P531 493 aa27.35■■□□□ 1.97
MRPL28-207ENST00000461550 MIA2Q96PC5 1412 aa27.34■■□□□ 1.97
MRPL28-207ENST00000461550 MROH2AA6NES4 1674 aa27.34■■□□□ 1.97
MRPL28-207ENST00000461550 DHX29Q7Z478 1369 aaKnown RBP27.32■■□□□ 1.96
MRPL28-207ENST00000461550 SETD1BQ9UPS6 1966 aaKnown RBP27.32■■□□□ 1.96
MRPL28-207ENST00000461550 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
MRPL28-207ENST00000461550 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
MRPL28-207ENST00000461550 UHRF1BP1Q6BDS2 1440 aa27.29■■□□□ 1.96
MRPL28-207ENST00000461550 PTPN23Q9H3S7 1636 aa27.28■■□□□ 1.96
MRPL28-207ENST00000461550 ZMYM3Q14202 1370 aa27.28■■□□□ 1.96
MRPL28-207ENST00000461550 MAST1Q9Y2H9 1570 aa27.27■■□□□ 1.96
MRPL28-207ENST00000461550 KIF3BO15066 747 aa27.25■■□□□ 1.95
MRPL28-207ENST00000461550 FGD6Q6ZV73 1430 aa27.22■■□□□ 1.95
MRPL28-207ENST00000461550 CROCC2H7BZ55 1655 aa27.21■■□□□ 1.95
MRPL28-207ENST00000461550 NPATQ14207 1427 aa27.19■■□□□ 1.94
MRPL28-207ENST00000461550 ABCC5O15440 1437 aa27.17■■□□□ 1.94
MRPL28-207ENST00000461550 PPP6R1Q9UPN7 881 aa27.17■■□□□ 1.94
MRPL28-207ENST00000461550 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
MRPL28-207ENST00000461550 PTPRKQ15262 1439 aa27.16■■□□□ 1.94
MRPL28-207ENST00000461550 TCOF1Q13428 1488 aaKnown RBP27.16■■□□□ 1.94
MRPL28-207ENST00000461550 KDM5DQ9BY66 1539 aa27.15■■□□□ 1.94
MRPL28-207ENST00000461550 ILDR1Q86SU0 546 aaPredicted RBP27.15■■□□□ 1.94
MRPL28-207ENST00000461550 DNMT1P26358 1616 aaKnown RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms