RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 LOC105371045A0A1W2PR82 267 aa38.09■■■■□ 3.69
LMBR1-214ENST00000461469 ARHGAP5Q13017 1502 aa38.08■■■■□ 3.69
LMBR1-214ENST00000461469 POGZQ7Z3K3 1410 aa38.08■■■■□ 3.69
LMBR1-214ENST00000461469 EFCAB2Q5VUJ9 269 aa38.07■■■■□ 3.68
LMBR1-214ENST00000461469 YEATS2Q9ULM3 1422 aa38.06■■■■□ 3.68
LMBR1-214ENST00000461469 PREX2Q70Z35 1606 aa38.06■■■■□ 3.68
LMBR1-214ENST00000461469 SIGLEC1Q9BZZ2 1709 aa38.06■■■■□ 3.68
LMBR1-214ENST00000461469 ADAMTSL3P82987 1691 aa38.04■■■■□ 3.68
LMBR1-214ENST00000461469 CDC42BPAQ5VT25 1732 aa38.04■■■■□ 3.68
LMBR1-214ENST00000461469 ZFYVE16Q7Z3T8 1539 aa38.02■■■■□ 3.68
LMBR1-214ENST00000461469 BCORL1Q5H9F3 1711 aa38.01■■■■□ 3.67
LMBR1-214ENST00000461469 MAGI2Q86UL8 1455 aa37.95■■■■□ 3.67
LMBR1-214ENST00000461469 ARHGEF12Q9NZN5 1544 aa37.92■■■■□ 3.66
LMBR1-214ENST00000461469 MADDQ8WXG6 1647 aa37.9■■■■□ 3.66
LMBR1-214ENST00000461469 ARID4BQ4LE39 1312 aaPredicted RBP37.9■■■■□ 3.66
LMBR1-214ENST00000461469 KDM5CP41229 1560 aa37.9■■■■□ 3.66
LMBR1-214ENST00000461469 ABCC1P33527 1531 aa37.9■■■■□ 3.66
LMBR1-214ENST00000461469 AFAP1Q8N556 730 aa37.89■■■■□ 3.66
LMBR1-214ENST00000461469 ZNF518AQ6AHZ1 1483 aa37.88■■■■□ 3.65
LMBR1-214ENST00000461469 ITSN2Q9NZM3 1697 aa37.88■■■■□ 3.65
LMBR1-214ENST00000461469 GPATCH8Q9UKJ3 1502 aaKnown RBP37.87■■■■□ 3.65
LMBR1-214ENST00000461469 TRAPPC8Q9Y2L5 1435 aa37.84■■■■□ 3.65
LMBR1-214ENST00000461469 PTPRMP28827 1452 aa37.84■■■■□ 3.65
LMBR1-214ENST00000461469 SAMD9LQ8IVG5 1584 aa37.83■■■■□ 3.65
LMBR1-214ENST00000461469 MTUS2Q5JR59 1369 aa37.81■■■■□ 3.64
LMBR1-214ENST00000461469 HECW2Q9P2P5 1572 aa37.8■■■■□ 3.64
LMBR1-214ENST00000461469 ATP10AO60312 1499 aa37.78■■■■□ 3.64
LMBR1-214ENST00000461469 EHBP1L1Q8N3D4 1523 aa37.77■■■■□ 3.64
LMBR1-214ENST00000461469 RIMS1Q86UR5 1692 aaKnown RBP37.77■■■■□ 3.64
LMBR1-214ENST00000461469 DIP2CQ9Y2E4 1556 aa37.76■■■■□ 3.63
LMBR1-214ENST00000461469 C9orf84Q5VXU9 1444 aa37.74■■■■□ 3.63
LMBR1-214ENST00000461469 ABCA6Q8N139 1617 aa37.74■■■■□ 3.63
LMBR1-214ENST00000461469 TIAM1Q13009 1591 aa37.73■■■■□ 3.63
LMBR1-214ENST00000461469 ZNF777Q9ULD5 760 aaPredicted RBP37.72■■■■□ 3.63
LMBR1-214ENST00000461469 SYCP2Q9BX26 1530 aa37.71■■■■□ 3.63
LMBR1-214ENST00000461469 MLH3Q9UHC1 1453 aa37.71■■■■□ 3.63
LMBR1-214ENST00000461469 VPS8Q8N3P4 1428 aa37.71■■■■□ 3.63
LMBR1-214ENST00000461469 CCNB3Q8WWL7 1395 aa37.7■■■■□ 3.63
LMBR1-214ENST00000461469 KIDINS220Q9ULH0 1771 aa37.69■■■■□ 3.62
LMBR1-214ENST00000461469 MLECQ14165 292 aa37.67■■■■□ 3.62
LMBR1-214ENST00000461469 CFDP1Q9UEE9 299 aaPredicted RBP37.64■■■■□ 3.62
LMBR1-214ENST00000461469 FER1L4A9Z1Z3 1794 aa37.64■■■■□ 3.62
LMBR1-214ENST00000461469 HNRNPMP52272 730 aaKnown RBP eCLIP37.62■■■■□ 3.612e-6■■■□□ 18.8
LMBR1-214ENST00000461469 REREQ9P2R6 1566 aa37.61■■■■□ 3.61
LMBR1-214ENST00000461469 MYT1LQ9UL68 1186 aa37.61■■■■□ 3.61
LMBR1-214ENST00000461469 ZNF644Q9H582 1327 aaPredicted RBP37.58■■■■□ 3.61
LMBR1-214ENST00000461469 SUPT6HQ7KZ85 1726 aaKnown RBP37.57■■■■□ 3.6
LMBR1-214ENST00000461469 KIAA1107Q9UPP5 1409 aa37.57■■■■□ 3.6
LMBR1-214ENST00000461469 NCOA2Q15596 1464 aa37.57■■■■□ 3.6
LMBR1-214ENST00000461469 PLEKHH2Q8IVE3 1493 aa37.52■■■■□ 3.6
LMBR1-214ENST00000461469 LRRC9Q6ZRR7 1453 aa37.5■■■■□ 3.59
LMBR1-214ENST00000461469 INO80Q9ULG1 1556 aaPredicted RBP37.5■■■■□ 3.59
LMBR1-214ENST00000461469 PLPPR3Q6T4P5 718 aa37.49■■■■□ 3.59
LMBR1-214ENST00000461469 AGLP35573 1532 aa37.48■■■■□ 3.59
LMBR1-214ENST00000461469 ATP7AQ04656 1500 aa37.47■■■■□ 3.59
LMBR1-214ENST00000461469 MBD5Q9P267 1494 aa37.47■■■■□ 3.59
LMBR1-214ENST00000461469 SPAG9O60271 1321 aaKnown RBP37.46■■■■□ 3.59
LMBR1-214ENST00000461469 KANK4Q5T7N3 995 aaPredicted RBP37.46■■■■□ 3.59
LMBR1-214ENST00000461469 LMTK3Q96Q04 1460 aa37.45■■■■□ 3.59
LMBR1-214ENST00000461469 MAP3K1Q13233 1512 aa37.43■■■■□ 3.58
LMBR1-214ENST00000461469 CAMSAP2Q08AD1 1489 aa37.39■■■■□ 3.58
LMBR1-214ENST00000461469 CEBPAP49715 358 aaPredicted RBP37.36■■■■□ 3.57
LMBR1-214ENST00000461469 PLXNC1O60486 1568 aa37.35■■■■□ 3.57
LMBR1-214ENST00000461469 A2MP01023 1474 aa37.29■■■■□ 3.56
LMBR1-214ENST00000461469 C3P01024 1663 aa37.28■■■■□ 3.56
LMBR1-214ENST00000461469 ADGBQ8N7X0 1667 aa37.27■■■■□ 3.56
LMBR1-214ENST00000461469 CCDC141Q6ZP82 1450 aa37.26■■■■□ 3.55
LMBR1-214ENST00000461469 HSPA2P54652 639 aa37.24■■■■□ 3.55
LMBR1-214ENST00000461469 RTEL1-TNFRSF6BF6WH68 1400 aa37.22■■■■□ 3.55
LMBR1-214ENST00000461469 ARHGEF5Q12774 1597 aa37.21■■■■□ 3.55
LMBR1-214ENST00000461469 PREX1Q8TCU6 1659 aa37.2■■■■□ 3.55
LMBR1-214ENST00000461469 MYOM3Q5VTT5 1437 aa37.18■■■■□ 3.54
LMBR1-214ENST00000461469 MROH2AA6NES4 1674 aa37.12■■■■□ 3.53
LMBR1-214ENST00000461469 CLTCQ00610 1675 aaKnown RBP37.12■■■■□ 3.53
LMBR1-214ENST00000461469 CNTLNQ9NXG0 1405 aa37.11■■■■□ 3.53
LMBR1-214ENST00000461469 MIA2Q96PC5 1412 aa37.1■■■■□ 3.53
LMBR1-214ENST00000461469 SETD1BQ9UPS6 1966 aaKnown RBP37.1■■■■□ 3.53
LMBR1-214ENST00000461469 DHX29Q7Z478 1369 aaKnown RBP37.09■■■■□ 3.53
LMBR1-214ENST00000461469 ESF1Q9H501 851 aaKnown RBP37.09■■■■□ 3.53
LMBR1-214ENST00000461469 RSPH4AQ5TD94 716 aa37.08■■■■□ 3.53
LMBR1-214ENST00000461469 GGT6Q6P531 493 aa37.06■■■■□ 3.52
LMBR1-214ENST00000461469 APLP2Q06481 763 aa37.05■■■■□ 3.52
LMBR1-214ENST00000461469 MAST1Q9Y2H9 1570 aa37.04■■■■□ 3.52
LMBR1-214ENST00000461469 ZMYM3Q14202 1370 aa37.03■■■■□ 3.52
LMBR1-214ENST00000461469 UHRF1BP1Q6BDS2 1440 aa37.01■■■■□ 3.51
LMBR1-214ENST00000461469 PTPN23Q9H3S7 1636 aa36.99■■■■□ 3.51
LMBR1-214ENST00000461469 TSPY4P0CV99 314 aa36.97■■■■□ 3.51
LMBR1-214ENST00000461469 TSPY10P0CW01 314 aa36.97■■■■□ 3.51
LMBR1-214ENST00000461469 STRCQ7RTU9 1775 aa36.95■■■■□ 3.51
LMBR1-214ENST00000461469 KIF3BO15066 747 aa36.94■■■■□ 3.5
LMBR1-214ENST00000461469 CROCC2H7BZ55 1655 aa36.93■■■■□ 3.5
LMBR1-214ENST00000461469 NPATQ14207 1427 aa36.92■■■■□ 3.5
LMBR1-214ENST00000461469 FGD6Q6ZV73 1430 aa36.92■■■■□ 3.5
LMBR1-214ENST00000461469 ILDR1Q86SU0 546 aaPredicted RBP36.9■■■■□ 3.5
LMBR1-214ENST00000461469 PTPRKQ15262 1439 aa36.9■■■■□ 3.5
LMBR1-214ENST00000461469 ABCC5O15440 1437 aa36.89■■■■□ 3.5
LMBR1-214ENST00000461469 TCOF1Q13428 1488 aaKnown RBP36.88■■■■□ 3.5
LMBR1-214ENST00000461469 PPP6R1Q9UPN7 881 aa36.87■■■■□ 3.49
LMBR1-214ENST00000461469 DNMT1P26358 1616 aaKnown RBP36.84■■■■□ 3.49
LMBR1-214ENST00000461469 MYO3AQ8NEV4 1616 aa36.83■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms