RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 ADAMTSL3P82987 1691 aa25.16■■□□□ 1.62
NUP50-213ENST00000461437 BCORL1Q5H9F3 1711 aa25.15■■□□□ 1.62
NUP50-213ENST00000461437 ARHGAP5Q13017 1502 aa25.15■■□□□ 1.62
NUP50-213ENST00000461437 YEATS2Q9ULM3 1422 aa25.14■■□□□ 1.62
NUP50-213ENST00000461437 ZMYM4Q5VZL5 1548 aa25.14■■□□□ 1.62
NUP50-213ENST00000461437 ARID4BQ4LE39 1312 aaPredicted RBP25.12■■□□□ 1.61
NUP50-213ENST00000461437 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
NUP50-213ENST00000461437 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
NUP50-213ENST00000461437 CDC42BPAQ5VT25 1732 aa25.11■■□□□ 1.61
NUP50-213ENST00000461437 PREX2Q70Z35 1606 aa25.11■■□□□ 1.61
NUP50-213ENST00000461437 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
NUP50-213ENST00000461437 EFCAB2Q5VUJ9 269 aa25.1■■□□□ 1.61
NUP50-213ENST00000461437 HECW2Q9P2P5 1572 aa25.1■■□□□ 1.61
NUP50-213ENST00000461437 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
NUP50-213ENST00000461437 RIMS1Q86UR5 1692 aaKnown RBP25.06■■□□□ 1.6
NUP50-213ENST00000461437 PTPRMP28827 1452 aa25.03■■□□□ 1.6
NUP50-213ENST00000461437 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
NUP50-213ENST00000461437 ITSN2Q9NZM3 1697 aa25.01■■□□□ 1.59
NUP50-213ENST00000461437 AFAP1Q8N556 730 aa25■■□□□ 1.59
NUP50-213ENST00000461437 MAGI2Q86UL8 1455 aa25■■□□□ 1.59
NUP50-213ENST00000461437 ARHGEF12Q9NZN5 1544 aa25■■□□□ 1.59
NUP50-213ENST00000461437 ABCC1P33527 1531 aa24.99■■□□□ 1.59
NUP50-213ENST00000461437 KDM5CP41229 1560 aa24.98■■□□□ 1.59
NUP50-213ENST00000461437 MLECQ14165 292 aa24.98■■□□□ 1.59
NUP50-213ENST00000461437 ZNF518AQ6AHZ1 1483 aa24.97■■□□□ 1.59
NUP50-213ENST00000461437 PLPPR3Q6T4P5 718 aa24.96■■□□□ 1.59
NUP50-213ENST00000461437 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.59
NUP50-213ENST00000461437 FER1L4A9Z1Z3 1794 aa24.95■■□□□ 1.58
NUP50-213ENST00000461437 SAMD9LQ8IVG5 1584 aa24.94■■□□□ 1.58
NUP50-213ENST00000461437 MYT1LQ9UL68 1186 aa24.94■■□□□ 1.58
NUP50-213ENST00000461437 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
NUP50-213ENST00000461437 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
NUP50-213ENST00000461437 ATP10AO60312 1499 aa24.93■■□□□ 1.58
NUP50-213ENST00000461437 DIP2CQ9Y2E4 1556 aa24.93■■□□□ 1.58
NUP50-213ENST00000461437 GPATCH8Q9UKJ3 1502 aaKnown RBP24.92■■□□□ 1.58
NUP50-213ENST00000461437 C9orf84Q5VXU9 1444 aa24.91■■□□□ 1.58
NUP50-213ENST00000461437 MTUS2Q5JR59 1369 aa24.91■■□□□ 1.58
NUP50-213ENST00000461437 SYCP2Q9BX26 1530 aa24.89■■□□□ 1.57
NUP50-213ENST00000461437 KIDINS220Q9ULH0 1771 aa24.88■■□□□ 1.57
NUP50-213ENST00000461437 TIAM1Q13009 1591 aa24.86■■□□□ 1.57
NUP50-213ENST00000461437 EHBP1L1Q8N3D4 1523 aa24.86■■□□□ 1.57
NUP50-213ENST00000461437 CCNB3Q8WWL7 1395 aa24.84■■□□□ 1.57
NUP50-213ENST00000461437 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.57
NUP50-213ENST00000461437 HNRNPMP52272 730 aaKnown RBP eCLIP24.82■■□□□ 1.56
NUP50-213ENST00000461437 CFDP1Q9UEE9 299 aaPredicted RBP24.8■■□□□ 1.56
NUP50-213ENST00000461437 ZNF644Q9H582 1327 aaPredicted RBP24.78■■□□□ 1.56
NUP50-213ENST00000461437 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
NUP50-213ENST00000461437 REREQ9P2R6 1566 aa24.77■■□□□ 1.56
NUP50-213ENST00000461437 SUPT6HQ7KZ85 1726 aaKnown RBP24.76■■□□□ 1.55
NUP50-213ENST00000461437 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
NUP50-213ENST00000461437 CEBPAP49715 358 aaPredicted RBP24.74■■□□□ 1.55
NUP50-213ENST00000461437 INO80Q9ULG1 1556 aaPredicted RBP24.72■■□□□ 1.55
NUP50-213ENST00000461437 NCOA2Q15596 1464 aa24.72■■□□□ 1.55
NUP50-213ENST00000461437 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
NUP50-213ENST00000461437 SPAG9O60271 1321 aaKnown RBP24.71■■□□□ 1.55
NUP50-213ENST00000461437 HSPA2P54652 639 aa24.7■■□□□ 1.54
NUP50-213ENST00000461437 PLEKHH2Q8IVE3 1493 aa24.7■■□□□ 1.54
NUP50-213ENST00000461437 KIAA1107Q9UPP5 1409 aa24.69■■□□□ 1.54
NUP50-213ENST00000461437 AGLP35573 1532 aa24.69■■□□□ 1.54
NUP50-213ENST00000461437 C3P01024 1663 aa24.67■■□□□ 1.54
NUP50-213ENST00000461437 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.54
NUP50-213ENST00000461437 MBD5Q9P267 1494 aa24.64■■□□□ 1.54
NUP50-213ENST00000461437 PREX1Q8TCU6 1659 aa24.64■■□□□ 1.53
NUP50-213ENST00000461437 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.53
NUP50-213ENST00000461437 KANK4Q5T7N3 995 aaPredicted RBP24.63■■□□□ 1.53
NUP50-213ENST00000461437 FBXO41Q8TF61 875 aa24.61■■□□□ 1.53
NUP50-213ENST00000461437 PLXNC1O60486 1568 aa24.61■■□□□ 1.53
NUP50-213ENST00000461437 ADGBQ8N7X0 1667 aa24.6■■□□□ 1.53
NUP50-213ENST00000461437 A2MP01023 1474 aa24.59■■□□□ 1.53
NUP50-213ENST00000461437 CLTCQ00610 1675 aaKnown RBP24.58■■□□□ 1.53
NUP50-213ENST00000461437 SETD1BQ9UPS6 1966 aaKnown RBP24.55■■□□□ 1.52
NUP50-213ENST00000461437 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
NUP50-213ENST00000461437 CCDC141Q6ZP82 1450 aa24.54■■□□□ 1.52
NUP50-213ENST00000461437 MAP3K1Q13233 1512 aa24.53■■□□□ 1.52
NUP50-213ENST00000461437 MROH2AA6NES4 1674 aa24.51■■□□□ 1.51
NUP50-213ENST00000461437 GGT6Q6P531 493 aa24.5■■□□□ 1.51
NUP50-213ENST00000461437 RTEL1-TNFRSF6BF6WH68 1400 aa24.48■■□□□ 1.51
NUP50-213ENST00000461437 ARHGEF5Q12774 1597 aa24.48■■□□□ 1.51
NUP50-213ENST00000461437 UHRF1BP1Q6BDS2 1440 aa24.48■■□□□ 1.51
NUP50-213ENST00000461437 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
NUP50-213ENST00000461437 CNTLNQ9NXG0 1405 aa24.47■■□□□ 1.51
NUP50-213ENST00000461437 MYOM3Q5VTT5 1437 aa24.44■■□□□ 1.5
NUP50-213ENST00000461437 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
NUP50-213ENST00000461437 DHX29Q7Z478 1369 aaKnown RBP24.42■■□□□ 1.5
NUP50-213ENST00000461437 APLP2Q06481 763 aa24.39■■□□□ 1.49
NUP50-213ENST00000461437 KIF3BO15066 747 aa24.38■■□□□ 1.49
NUP50-213ENST00000461437 RSPH4AQ5TD94 716 aa24.37■■□□□ 1.49
NUP50-213ENST00000461437 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
NUP50-213ENST00000461437 MIA2Q96PC5 1412 aa24.36■■□□□ 1.49
NUP50-213ENST00000461437 MYO3AQ8NEV4 1616 aa24.36■■□□□ 1.49
NUP50-213ENST00000461437 PTPN23Q9H3S7 1636 aa24.36■■□□□ 1.49
NUP50-213ENST00000461437 TSPY4P0CV99 314 aa24.36■■□□□ 1.49
NUP50-213ENST00000461437 TSPY10P0CW01 314 aa24.36■■□□□ 1.49
NUP50-213ENST00000461437 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
NUP50-213ENST00000461437 NPATQ14207 1427 aa24.34■■□□□ 1.49
NUP50-213ENST00000461437 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
NUP50-213ENST00000461437 CAMSAP1Q5T5Y3 1602 aa24.3■■□□□ 1.48
NUP50-213ENST00000461437 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
NUP50-213ENST00000461437 KDM5DQ9BY66 1539 aa24.29■■□□□ 1.48
NUP50-213ENST00000461437 CEP170BQ9Y4F5 1589 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms