RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 SNPHO15079 494 aa10.61□□□□□ -0.71
CCT4-202ENST00000461370 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
CCT4-202ENST00000461370 KIF3CO14782 793 aa10.6□□□□□ -0.71
CCT4-202ENST00000461370 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
CCT4-202ENST00000461370 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
CCT4-202ENST00000461370 DOK7Q18PE1 504 aa10.54□□□□□ -0.72
CCT4-202ENST00000461370 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
CCT4-202ENST00000461370 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
CCT4-202ENST00000461370 FOXK1P85037 733 aa10.52□□□□□ -0.73
CCT4-202ENST00000461370 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
CCT4-202ENST00000461370 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.73
CCT4-202ENST00000461370 RIMBP2O15034 1052 aa10.51□□□□□ -0.73
CCT4-202ENST00000461370 PDE4AP27815 886 aa10.51□□□□□ -0.73
CCT4-202ENST00000461370 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
CCT4-202ENST00000461370 ZNF710Q8N1W2 664 aa10.5□□□□□ -0.73
CCT4-202ENST00000461370 ST18O60284 1047 aa10.49□□□□□ -0.73
CCT4-202ENST00000461370 DSG2Q14126 1118 aa10.49□□□□□ -0.73
CCT4-202ENST00000461370 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
CCT4-202ENST00000461370 PPP1R15BQ5SWA1 713 aa10.47□□□□□ -0.73
CCT4-202ENST00000461370 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
CCT4-202ENST00000461370 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
CCT4-202ENST00000461370 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
CCT4-202ENST00000461370 MFSD10Q14728 455 aa10.45□□□□□ -0.74
CCT4-202ENST00000461370 ZSWIM6Q9HCJ5 1215 aa10.45□□□□□ -0.74
CCT4-202ENST00000461370 SLC34A2O95436 690 aa10.43□□□□□ -0.74
CCT4-202ENST00000461370 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
CCT4-202ENST00000461370 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
CCT4-202ENST00000461370 EMP3P54852 163 aa10.39□□□□□ -0.75
CCT4-202ENST00000461370 POTEMA6NI47 508 aa10.38□□□□□ -0.75
CCT4-202ENST00000461370 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
CCT4-202ENST00000461370 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
CCT4-202ENST00000461370 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
CCT4-202ENST00000461370 PCDHGA4Q9Y5G9 962 aa10.38□□□□□ -0.75
CCT4-202ENST00000461370 ARSIQ5FYB1 569 aa10.37□□□□□ -0.75
CCT4-202ENST00000461370 PTCD2Q8WV60 388 aaKnown RBP10.37□□□□□ -0.75
CCT4-202ENST00000461370 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCT4-202ENST00000461370 TBC1D12O60347 775 aa10.34□□□□□ -0.75
CCT4-202ENST00000461370 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
CCT4-202ENST00000461370 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
CCT4-202ENST00000461370 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
CCT4-202ENST00000461370 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCT4-202ENST00000461370 NUDT7P0C024 238 aa10.32□□□□□ -0.76
CCT4-202ENST00000461370 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
CCT4-202ENST00000461370 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
CCT4-202ENST00000461370 FAM205CA6NFA0 338 aa10.29□□□□□ -0.76
CCT4-202ENST00000461370 ERBB3P21860 1342 aa10.29□□□□□ -0.76
CCT4-202ENST00000461370 E2F4Q16254 413 aa10.28□□□□□ -0.76
CCT4-202ENST00000461370 ZNF316A6NFI3 1004 aaPredicted RBP10.27□□□□□ -0.77
CCT4-202ENST00000461370 HS3ST6Q96QI5 342 aa10.27□□□□□ -0.77
CCT4-202ENST00000461370 MAP3K9P80192 1104 aa10.26□□□□□ -0.77
CCT4-202ENST00000461370 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
CCT4-202ENST00000461370 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
CCT4-202ENST00000461370 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
CCT4-202ENST00000461370 DPYSL4O14531 572 aa10.23□□□□□ -0.77
CCT4-202ENST00000461370 EVI5O60447 810 aa10.22□□□□□ -0.77
CCT4-202ENST00000461370 POTEB3A0JP26 581 aa10.21□□□□□ -0.77
CCT4-202ENST00000461370 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.77
CCT4-202ENST00000461370 POTEBQ6S5H4 581 aa10.21□□□□□ -0.77
CCT4-202ENST00000461370 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
CCT4-202ENST00000461370 PCDH10Q9P2E7 1040 aa10.2□□□□□ -0.78
CCT4-202ENST00000461370 ARIH1Q9Y4X5 557 aaPredicted RBP10.19□□□□□ -0.78
CCT4-202ENST00000461370 P3H3Q8IVL6 736 aa10.18□□□□□ -0.78
CCT4-202ENST00000461370 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
CCT4-202ENST00000461370 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
CCT4-202ENST00000461370 PDIA6Q15084 440 aa10.16□□□□□ -0.78
CCT4-202ENST00000461370 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
CCT4-202ENST00000461370 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
CCT4-202ENST00000461370 ZNF687Q8N1G0 1237 aa10.15□□□□□ -0.78
CCT4-202ENST00000461370 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
CCT4-202ENST00000461370 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
CCT4-202ENST00000461370 JPH4Q96JJ6 628 aa10.14□□□□□ -0.79
CCT4-202ENST00000461370 KDM2AQ9Y2K7 1162 aa10.14□□□□□ -0.79
CCT4-202ENST00000461370 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
CCT4-202ENST00000461370 FOSBP53539 338 aa10.12□□□□□ -0.79
CCT4-202ENST00000461370 PBX2P40425 430 aa10.1□□□□□ -0.79
CCT4-202ENST00000461370 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
CCT4-202ENST00000461370 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
CCT4-202ENST00000461370 PHF14O94880 888 aa10.08□□□□□ -0.8
CCT4-202ENST00000461370 PTGER2P43116 358 aa10.08□□□□□ -0.8
CCT4-202ENST00000461370 DDX12PQ92771 950 aa10.07□□□□□ -0.8
CCT4-202ENST00000461370 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
CCT4-202ENST00000461370 PCDHGA10Q9Y5H3 936 aa10.07□□□□□ -0.8
CCT4-202ENST00000461370 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
CCT4-202ENST00000461370 KCNH8Q96L42 1107 aa10.06□□□□□ -0.8
CCT4-202ENST00000461370 FBXW7Q969H0 707 aa10.05□□□□□ -0.8
CCT4-202ENST00000461370 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
CCT4-202ENST00000461370 ARHGAP33O14559 1287 aa10.04□□□□□ -0.8
CCT4-202ENST00000461370 NBR1Q14596 966 aa10.04□□□□□ -0.8
CCT4-202ENST00000461370 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
CCT4-202ENST00000461370 EPAS1Q99814 870 aa10.04□□□□□ -0.8
CCT4-202ENST00000461370 AXIN2Q9Y2T1 843 aa10.04□□□□□ -0.8
CCT4-202ENST00000461370 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
CCT4-202ENST00000461370 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
CCT4-202ENST00000461370 LSM11P83369 360 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCT4-202ENST00000461370 PTPREP23469 700 aa10.01□□□□□ -0.81
CCT4-202ENST00000461370 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
CCT4-202ENST00000461370 PSEN2P49810 448 aa10□□□□□ -0.81
CCT4-202ENST00000461370 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
CCT4-202ENST00000461370 ANKRD13DQ6ZTN6 518 aa9.98□□□□□ -0.81
CCT4-202ENST00000461370 MAP3K7O43318 606 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms