RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
PTPN18-206ENST00000460992 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
PTPN18-206ENST00000460992 FANCAO15360 1455 aa11.97□□□□□ -0.49
PTPN18-206ENST00000460992 NEO1Q92859 1461 aa11.97□□□□□ -0.49
PTPN18-206ENST00000460992 PLEKHD1A6NEE1 506 aa11.97□□□□□ -0.49
PTPN18-206ENST00000460992 ABCC1P33527 1531 aa11.96□□□□□ -0.5
PTPN18-206ENST00000460992 SAMD9LQ8IVG5 1584 aa11.94□□□□□ -0.5
PTPN18-206ENST00000460992 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
PTPN18-206ENST00000460992 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
PTPN18-206ENST00000460992 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
PTPN18-206ENST00000460992 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
PTPN18-206ENST00000460992 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
PTPN18-206ENST00000460992 LRRC9Q6ZRR7 1453 aa11.92□□□□□ -0.5
PTPN18-206ENST00000460992 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
PTPN18-206ENST00000460992 PLCH2O75038 1416 aa11.92□□□□□ -0.5
PTPN18-206ENST00000460992 NCOA2Q15596 1464 aa11.91□□□□□ -0.5
PTPN18-206ENST00000460992 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
PTPN18-206ENST00000460992 POGZQ7Z3K3 1410 aa11.9□□□□□ -0.5
PTPN18-206ENST00000460992 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
PTPN18-206ENST00000460992 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
PTPN18-206ENST00000460992 KDM5CP41229 1560 aa11.88□□□□□ -0.51
PTPN18-206ENST00000460992 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
PTPN18-206ENST00000460992 DENND4BO75064 1496 aaPredicted RBP11.88□□□□□ -0.51
PTPN18-206ENST00000460992 SIGLEC1Q9BZZ2 1709 aa11.87□□□□□ -0.51
PTPN18-206ENST00000460992 ABCA6Q8N139 1617 aa11.86□□□□□ -0.51
PTPN18-206ENST00000460992 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
PTPN18-206ENST00000460992 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
PTPN18-206ENST00000460992 ARHGEF12Q9NZN5 1544 aa11.85□□□□□ -0.51
PTPN18-206ENST00000460992 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
PTPN18-206ENST00000460992 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
PTPN18-206ENST00000460992 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
PTPN18-206ENST00000460992 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
PTPN18-206ENST00000460992 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
PTPN18-206ENST00000460992 DIP2CQ9Y2E4 1556 aa11.83□□□□□ -0.52
PTPN18-206ENST00000460992 CROCC2H7BZ55 1655 aa11.82□□□□□ -0.52
PTPN18-206ENST00000460992 KIDINS220Q9ULH0 1771 aa11.82□□□□□ -0.52
PTPN18-206ENST00000460992 YEATS2Q9ULM3 1422 aa11.81□□□□□ -0.52
PTPN18-206ENST00000460992 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
PTPN18-206ENST00000460992 KANK4Q5T7N3 995 aaPredicted RBP11.81□□□□□ -0.52
PTPN18-206ENST00000460992 TRAPPC8Q9Y2L5 1435 aa11.8□□□□□ -0.52
PTPN18-206ENST00000460992 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
PTPN18-206ENST00000460992 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
PTPN18-206ENST00000460992 ADGBQ8N7X0 1667 aa11.79□□□□□ -0.52
PTPN18-206ENST00000460992 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
PTPN18-206ENST00000460992 ATP7AQ04656 1500 aa11.79□□□□□ -0.52
PTPN18-206ENST00000460992 BCORL1Q5H9F3 1711 aa11.78□□□□□ -0.52
PTPN18-206ENST00000460992 FOXD1Q16676 465 aa11.78□□□□□ -0.52
PTPN18-206ENST00000460992 EFCAB2Q5VUJ9 269 aa11.78□□□□□ -0.52
PTPN18-206ENST00000460992 ARHGEF5Q12774 1597 aa11.78□□□□□ -0.52
PTPN18-206ENST00000460992 MAGI2Q86UL8 1455 aa11.77□□□□□ -0.52
PTPN18-206ENST00000460992 CCDC141Q6ZP82 1450 aa11.76□□□□□ -0.53
PTPN18-206ENST00000460992 REREQ9P2R6 1566 aa11.76□□□□□ -0.53
PTPN18-206ENST00000460992 MADDQ8WXG6 1647 aa11.76□□□□□ -0.53
PTPN18-206ENST00000460992 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
PTPN18-206ENST00000460992 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
PTPN18-206ENST00000460992 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
PTPN18-206ENST00000460992 APLP2Q06481 763 aa11.75□□□□□ -0.53
PTPN18-206ENST00000460992 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
PTPN18-206ENST00000460992 C9orf84Q5VXU9 1444 aa11.75□□□□□ -0.53
PTPN18-206ENST00000460992 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
PTPN18-206ENST00000460992 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
PTPN18-206ENST00000460992 PLXNC1O60486 1568 aa11.75□□□□□ -0.53
PTPN18-206ENST00000460992 DNMT1P26358 1616 aaKnown RBP11.75□□□□□ -0.53
PTPN18-206ENST00000460992 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
PTPN18-206ENST00000460992 FGD6Q6ZV73 1430 aa11.74□□□□□ -0.53
PTPN18-206ENST00000460992 ADAMTSL3P82987 1691 aa11.74□□□□□ -0.53
PTPN18-206ENST00000460992 RIMS1Q86UR5 1692 aaKnown RBP11.73□□□□□ -0.53
PTPN18-206ENST00000460992 MIA2Q96PC5 1412 aa11.73□□□□□ -0.53
PTPN18-206ENST00000460992 ZNF644Q9H582 1327 aaPredicted RBP11.73□□□□□ -0.53
PTPN18-206ENST00000460992 MAST1Q9Y2H9 1570 aa11.72□□□□□ -0.53
PTPN18-206ENST00000460992 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
PTPN18-206ENST00000460992 AFAP1Q8N556 730 aa11.7□□□□□ -0.54
PTPN18-206ENST00000460992 ATP10AO60312 1499 aa11.7□□□□□ -0.54
PTPN18-206ENST00000460992 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
PTPN18-206ENST00000460992 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN18-206ENST00000460992 AGLP35573 1532 aa11.67□□□□□ -0.54
PTPN18-206ENST00000460992 DAPK1P53355 1430 aa11.66□□□□□ -0.54
PTPN18-206ENST00000460992 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
PTPN18-206ENST00000460992 A2MP01023 1474 aa11.65□□□□□ -0.54
PTPN18-206ENST00000460992 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
PTPN18-206ENST00000460992 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
PTPN18-206ENST00000460992 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
PTPN18-206ENST00000460992 ABCC5O15440 1437 aa11.64□□□□□ -0.55
PTPN18-206ENST00000460992 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
PTPN18-206ENST00000460992 RTEL1-TNFRSF6BF6WH68 1400 aa11.63□□□□□ -0.55
PTPN18-206ENST00000460992 CLTCQ00610 1675 aaKnown RBP11.63□□□□□ -0.55
PTPN18-206ENST00000460992 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
PTPN18-206ENST00000460992 ADRA2BP18089 450 aa11.62□□□□□ -0.55
PTPN18-206ENST00000460992 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
PTPN18-206ENST00000460992 C3P01024 1663 aa11.62□□□□□ -0.55
PTPN18-206ENST00000460992 MROH1Q8NDA8 1641 aa11.61□□□□□ -0.55
PTPN18-206ENST00000460992 PTPRMP28827 1452 aa11.61□□□□□ -0.55
PTPN18-206ENST00000460992 MROH2AA6NES4 1674 aa11.61□□□□□ -0.55
PTPN18-206ENST00000460992 CEP152O94986 1710 aa11.6□□□□□ -0.55
PTPN18-206ENST00000460992 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
PTPN18-206ENST00000460992 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
PTPN18-206ENST00000460992 ADGRL2O95490 1459 aa11.59□□□□□ -0.55
PTPN18-206ENST00000460992 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
PTPN18-206ENST00000460992 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
PTPN18-206ENST00000460992 MLECQ14165 292 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms