RNA–Protein interactions for RNA: ENST00000460808.5

TGFA-208, Transcript of transforming growth factor alpha, humanhuman

TSL 4

Gene TGFA, Length 470 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-208ENST00000460808 ARHGEF40Q8TER5 1519 aa19.24■□□□□ 0.67
TGFA-208ENST00000460808 POGZQ7Z3K3 1410 aa19.23■□□□□ 0.67
TGFA-208ENST00000460808 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
TGFA-208ENST00000460808 SCAPERQ9BY12 1400 aa19.21■□□□□ 0.67
TGFA-208ENST00000460808 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
TGFA-208ENST00000460808 ARHGAP5Q13017 1502 aa19.2■□□□□ 0.66
TGFA-208ENST00000460808 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
TGFA-208ENST00000460808 KDM5CP41229 1560 aa19.19■□□□□ 0.66
TGFA-208ENST00000460808 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
TGFA-208ENST00000460808 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
TGFA-208ENST00000460808 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
TGFA-208ENST00000460808 ABCC1P33527 1531 aa19.17■□□□□ 0.66
TGFA-208ENST00000460808 ARHGEF12Q9NZN5 1544 aa19.17■□□□□ 0.66
TGFA-208ENST00000460808 ADAMTSL3P82987 1691 aa19.17■□□□□ 0.66
TGFA-208ENST00000460808 YEATS2Q9ULM3 1422 aa19.16■□□□□ 0.66
TGFA-208ENST00000460808 EHBP1L1Q8N3D4 1523 aa19.15■□□□□ 0.66
TGFA-208ENST00000460808 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.66
TGFA-208ENST00000460808 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.65
TGFA-208ENST00000460808 TIAM1Q13009 1591 aa19.14■□□□□ 0.65
TGFA-208ENST00000460808 SAMD9LQ8IVG5 1584 aa19.14■□□□□ 0.65
TGFA-208ENST00000460808 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.65
TGFA-208ENST00000460808 ZNF518AQ6AHZ1 1483 aa19.13■□□□□ 0.65
TGFA-208ENST00000460808 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
TGFA-208ENST00000460808 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
TGFA-208ENST00000460808 TRAPPC8Q9Y2L5 1435 aa19.09■□□□□ 0.65
TGFA-208ENST00000460808 MLH3Q9UHC1 1453 aa19.09■□□□□ 0.65
TGFA-208ENST00000460808 HECW2Q9P2P5 1572 aa19.08■□□□□ 0.65
TGFA-208ENST00000460808 AFAP1Q8N556 730 aa19.07■□□□□ 0.64
TGFA-208ENST00000460808 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
TGFA-208ENST00000460808 KIAA1107Q9UPP5 1409 aa19.06■□□□□ 0.64
TGFA-208ENST00000460808 KIDINS220Q9ULH0 1771 aa19.06■□□□□ 0.64
TGFA-208ENST00000460808 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
TGFA-208ENST00000460808 ATP10AO60312 1499 aa19.05■□□□□ 0.64
TGFA-208ENST00000460808 ABCA6Q8N139 1617 aa19.05■□□□□ 0.64
TGFA-208ENST00000460808 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
TGFA-208ENST00000460808 LRRC9Q6ZRR7 1453 aa19.04■□□□□ 0.64
TGFA-208ENST00000460808 MADDQ8WXG6 1647 aa19.04■□□□□ 0.64
TGFA-208ENST00000460808 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
TGFA-208ENST00000460808 NCOA2Q15596 1464 aa19.03■□□□□ 0.64
TGFA-208ENST00000460808 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
TGFA-208ENST00000460808 C9orf84Q5VXU9 1444 aa19.02■□□□□ 0.64
TGFA-208ENST00000460808 PTPRMP28827 1452 aa19■□□□□ 0.63
TGFA-208ENST00000460808 PLEKHH2Q8IVE3 1493 aa19■□□□□ 0.63
TGFA-208ENST00000460808 MBD5Q9P267 1494 aa19■□□□□ 0.63
TGFA-208ENST00000460808 INO80Q9ULG1 1556 aaPredicted RBP18.99■□□□□ 0.63
TGFA-208ENST00000460808 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
TGFA-208ENST00000460808 AGLP35573 1532 aa18.97■□□□□ 0.63
TGFA-208ENST00000460808 KANK4Q5T7N3 995 aaPredicted RBP18.96■□□□□ 0.63
TGFA-208ENST00000460808 ZNF644Q9H582 1327 aaPredicted RBP18.96■□□□□ 0.63
TGFA-208ENST00000460808 RIMS1Q86UR5 1692 aaKnown RBP18.95■□□□□ 0.62
TGFA-208ENST00000460808 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
TGFA-208ENST00000460808 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
TGFA-208ENST00000460808 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
TGFA-208ENST00000460808 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
TGFA-208ENST00000460808 ARID4BQ4LE39 1312 aaPredicted RBP18.93■□□□□ 0.62
TGFA-208ENST00000460808 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
TGFA-208ENST00000460808 CAMSAP2Q08AD1 1489 aa18.9■□□□□ 0.62
TGFA-208ENST00000460808 ARHGEF5Q12774 1597 aa18.89■□□□□ 0.61
TGFA-208ENST00000460808 RTEL1-TNFRSF6BF6WH68 1400 aa18.87■□□□□ 0.61
TGFA-208ENST00000460808 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
TGFA-208ENST00000460808 MYOM3Q5VTT5 1437 aa18.86■□□□□ 0.61
TGFA-208ENST00000460808 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
TGFA-208ENST00000460808 MIA2Q96PC5 1412 aa18.85■□□□□ 0.61
TGFA-208ENST00000460808 CCDC141Q6ZP82 1450 aa18.84■□□□□ 0.61
TGFA-208ENST00000460808 A2MP01023 1474 aa18.82■□□□□ 0.6
TGFA-208ENST00000460808 LMTK3Q96Q04 1460 aa18.82■□□□□ 0.6
TGFA-208ENST00000460808 MLECQ14165 292 aa18.81■□□□□ 0.6
TGFA-208ENST00000460808 MAST1Q9Y2H9 1570 aa18.81■□□□□ 0.6
TGFA-208ENST00000460808 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
TGFA-208ENST00000460808 C3P01024 1663 aa18.79■□□□□ 0.6
TGFA-208ENST00000460808 MROH2AA6NES4 1674 aa18.77■□□□□ 0.6
TGFA-208ENST00000460808 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.6
TGFA-208ENST00000460808 TCOF1Q13428 1488 aaKnown RBP18.76■□□□□ 0.59
TGFA-208ENST00000460808 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
TGFA-208ENST00000460808 CROCC2H7BZ55 1655 aa18.74■□□□□ 0.59
TGFA-208ENST00000460808 DHX29Q7Z478 1369 aaKnown RBP18.74■□□□□ 0.59
TGFA-208ENST00000460808 FGD6Q6ZV73 1430 aa18.74■□□□□ 0.59
TGFA-208ENST00000460808 SETD1BQ9UPS6 1966 aaKnown RBP18.73■□□□□ 0.59
TGFA-208ENST00000460808 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
TGFA-208ENST00000460808 PREX1Q8TCU6 1659 aa18.73■□□□□ 0.59
TGFA-208ENST00000460808 APLP2Q06481 763 aa18.71■□□□□ 0.59
TGFA-208ENST00000460808 CEBPAP49715 358 aaPredicted RBP18.7■□□□□ 0.58
TGFA-208ENST00000460808 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
TGFA-208ENST00000460808 SHANK2Q9UPX8 1470 aa18.7■□□□□ 0.58
TGFA-208ENST00000460808 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
TGFA-208ENST00000460808 ABCC5O15440 1437 aa18.69■□□□□ 0.58
TGFA-208ENST00000460808 FAM135AQ9P2D6 1515 aa18.67■□□□□ 0.58
TGFA-208ENST00000460808 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
TGFA-208ENST00000460808 PPP6R1Q9UPN7 881 aa18.66■□□□□ 0.58
TGFA-208ENST00000460808 EIF2AK4Q9P2K8 1649 aaKnown RBP18.66■□□□□ 0.58
TGFA-208ENST00000460808 TSPY4P0CV99 314 aa18.65■□□□□ 0.58
TGFA-208ENST00000460808 TSPY10P0CW01 314 aa18.65■□□□□ 0.58
TGFA-208ENST00000460808 ZMYM3Q14202 1370 aa18.65■□□□□ 0.58
TGFA-208ENST00000460808 DAPK1P53355 1430 aa18.65■□□□□ 0.58
TGFA-208ENST00000460808 MROH1Q8NDA8 1641 aa18.64■□□□□ 0.57
TGFA-208ENST00000460808 NPATQ14207 1427 aa18.64■□□□□ 0.57
TGFA-208ENST00000460808 PTPRKQ15262 1439 aa18.62■□□□□ 0.57
TGFA-208ENST00000460808 KDM5DQ9BY66 1539 aa18.6■□□□□ 0.57
TGFA-208ENST00000460808 DUOX2Q9NRD8 1548 aa18.6■□□□□ 0.57
TGFA-208ENST00000460808 GGT6Q6P531 493 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms