RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
NXF3-203ENST00000460791 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
NXF3-203ENST00000460791 FANCAO15360 1455 aa9.18□□□□□ -0.94
NXF3-203ENST00000460791 PLCH2O75038 1416 aa9.18□□□□□ -0.94
NXF3-203ENST00000460791 ARHGAP5Q13017 1502 aa9.18□□□□□ -0.94
NXF3-203ENST00000460791 EHBP1L1Q8N3D4 1523 aa9.18□□□□□ -0.94
NXF3-203ENST00000460791 CCNB3Q8WWL7 1395 aa9.18□□□□□ -0.94
NXF3-203ENST00000460791 NCOA2Q15596 1464 aa9.17□□□□□ -0.94
NXF3-203ENST00000460791 AKNAQ7Z591 1439 aa9.17□□□□□ -0.94
NXF3-203ENST00000460791 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
NXF3-203ENST00000460791 GPATCH8Q9UKJ3 1502 aaKnown RBP9.16□□□□□ -0.94
NXF3-203ENST00000460791 ZNF644Q9H582 1327 aaPredicted RBP9.16□□□□□ -0.94
NXF3-203ENST00000460791 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
NXF3-203ENST00000460791 PPP6R1Q9UPN7 881 aa9.16□□□□□ -0.94
NXF3-203ENST00000460791 MAP3K1Q13233 1512 aa9.15□□□□□ -0.94
NXF3-203ENST00000460791 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
NXF3-203ENST00000460791 CFAP74Q9C0B2 1584 aa9.15□□□□□ -0.95
NXF3-203ENST00000460791 NEO1Q92859 1461 aa9.15□□□□□ -0.95
NXF3-203ENST00000460791 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
NXF3-203ENST00000460791 MYT1LQ9UL68 1186 aa9.14□□□□□ -0.95
NXF3-203ENST00000460791 ADGRL1O94910 1474 aa9.14□□□□□ -0.95
NXF3-203ENST00000460791 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
NXF3-203ENST00000460791 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
NXF3-203ENST00000460791 ARAP3Q8WWN8 1544 aa9.13□□□□□ -0.95
NXF3-203ENST00000460791 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
NXF3-203ENST00000460791 ITSN2Q9NZM3 1697 aa9.13□□□□□ -0.95
NXF3-203ENST00000460791 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
NXF3-203ENST00000460791 SAMD9LQ8IVG5 1584 aa9.12□□□□□ -0.95
NXF3-203ENST00000460791 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
NXF3-203ENST00000460791 ARHGEF12Q9NZN5 1544 aa9.11□□□□□ -0.95
NXF3-203ENST00000460791 TRAPPC8Q9Y2L5 1435 aa9.11□□□□□ -0.95
NXF3-203ENST00000460791 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
NXF3-203ENST00000460791 ABCC1P33527 1531 aa9.09□□□□□ -0.95
NXF3-203ENST00000460791 MYOM3Q5VTT5 1437 aa9.08□□□□□ -0.96
NXF3-203ENST00000460791 FAM50AQ14320 339 aaKnown RBP9.08□□□□□ -0.96
NXF3-203ENST00000460791 POGZQ7Z3K3 1410 aa9.07□□□□□ -0.96
NXF3-203ENST00000460791 CAMSAP2Q08AD1 1489 aa9.07□□□□□ -0.96
NXF3-203ENST00000460791 YEATS2Q9ULM3 1422 aa9.06□□□□□ -0.96
NXF3-203ENST00000460791 PTPN23Q9H3S7 1636 aa9.06□□□□□ -0.96
NXF3-203ENST00000460791 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
NXF3-203ENST00000460791 ARID4BQ4LE39 1312 aaPredicted RBP9.05□□□□□ -0.96
NXF3-203ENST00000460791 KIDINS220Q9ULH0 1771 aa9.05□□□□□ -0.96
NXF3-203ENST00000460791 ZNF518AQ6AHZ1 1483 aa9.05□□□□□ -0.96
NXF3-203ENST00000460791 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
NXF3-203ENST00000460791 FGD6Q6ZV73 1430 aa9.05□□□□□ -0.96
NXF3-203ENST00000460791 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
NXF3-203ENST00000460791 MBD5Q9P267 1494 aa9.04□□□□□ -0.96
NXF3-203ENST00000460791 ITGAEP38570 1179 aa9.04□□□□□ -0.96
NXF3-203ENST00000460791 MLECQ14165 292 aa9.04□□□□□ -0.96
NXF3-203ENST00000460791 CHIC2Q9UKJ5 165 aa9.04□□□□□ -0.96
NXF3-203ENST00000460791 ZFYVE16Q7Z3T8 1539 aa9.04□□□□□ -0.96
NXF3-203ENST00000460791 SIGLEC1Q9BZZ2 1709 aa9.03□□□□□ -0.96
NXF3-203ENST00000460791 ZMYM4Q5VZL5 1548 aa9.03□□□□□ -0.96
NXF3-203ENST00000460791 MIA2Q96PC5 1412 aa9.03□□□□□ -0.96
NXF3-203ENST00000460791 KDM5CP41229 1560 aa9.03□□□□□ -0.96
NXF3-203ENST00000460791 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
NXF3-203ENST00000460791 ARHGEF40Q8TER5 1519 aa9.02□□□□□ -0.97
NXF3-203ENST00000460791 TSPY4P0CV99 314 aa9.02□□□□□ -0.97
NXF3-203ENST00000460791 TSPY10P0CW01 314 aa9.02□□□□□ -0.97
NXF3-203ENST00000460791 ABCA6Q8N139 1617 aa9.02□□□□□ -0.97
NXF3-203ENST00000460791 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
NXF3-203ENST00000460791 KDM4FA0A1W2PPD8 638 aa9.01□□□□□ -0.97
NXF3-203ENST00000460791 ATP10AO60312 1499 aa9.01□□□□□ -0.97
NXF3-203ENST00000460791 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
NXF3-203ENST00000460791 MLH3Q9UHC1 1453 aa9.01□□□□□ -0.97
NXF3-203ENST00000460791 ATP7AQ04656 1500 aa9□□□□□ -0.97
NXF3-203ENST00000460791 ARHGEF5Q12774 1597 aa9□□□□□ -0.97
NXF3-203ENST00000460791 DIP2CQ9Y2E4 1556 aa9□□□□□ -0.97
NXF3-203ENST00000460791 ABCC5O15440 1437 aa9□□□□□ -0.97
NXF3-203ENST00000460791 RSPH4AQ5TD94 716 aa9□□□□□ -0.97
NXF3-203ENST00000460791 MAGI2Q86UL8 1455 aa9□□□□□ -0.97
NXF3-203ENST00000460791 RRP7BPQ9NSQ0 103 aa8.99□□□□□ -0.97
NXF3-203ENST00000460791 TCOF1Q13428 1488 aaKnown RBP8.99□□□□□ -0.97
NXF3-203ENST00000460791 ADGBQ8N7X0 1667 aa8.99□□□□□ -0.97
NXF3-203ENST00000460791 INO80Q9ULG1 1556 aaPredicted RBP8.99□□□□□ -0.97
NXF3-203ENST00000460791 DAPK1P53355 1430 aa8.98□□□□□ -0.97
NXF3-203ENST00000460791 CROCC2H7BZ55 1655 aa8.98□□□□□ -0.97
NXF3-203ENST00000460791 DNMT1P26358 1616 aaKnown RBP8.98□□□□□ -0.97
NXF3-203ENST00000460791 C9orf84Q5VXU9 1444 aa8.97□□□□□ -0.97
NXF3-203ENST00000460791 BCORL1Q5H9F3 1711 aa8.97□□□□□ -0.97
NXF3-203ENST00000460791 KIF3BO15066 747 aa8.96□□□□□ -0.98
NXF3-203ENST00000460791 GGT6Q6P531 493 aa8.96□□□□□ -0.98
NXF3-203ENST00000460791 RTEL1-TNFRSF6BF6WH68 1400 aa8.96□□□□□ -0.98
NXF3-203ENST00000460791 PTPRKQ15262 1439 aa8.96□□□□□ -0.98
NXF3-203ENST00000460791 A2MP01023 1474 aa8.96□□□□□ -0.98
NXF3-203ENST00000460791 RIMS1Q86UR5 1692 aaKnown RBP8.95□□□□□ -0.98
NXF3-203ENST00000460791 MAST1Q9Y2H9 1570 aa8.95□□□□□ -0.98
NXF3-203ENST00000460791 FER1L4A9Z1Z3 1794 aa8.94□□□□□ -0.98
NXF3-203ENST00000460791 RRBP1Q9P2E9 1410 aaKnown RBP8.94□□□□□ -0.98
NXF3-203ENST00000460791 MADDQ8WXG6 1647 aa8.94□□□□□ -0.98
NXF3-203ENST00000460791 ADAMTSL3P82987 1691 aa8.94□□□□□ -0.98
NXF3-203ENST00000460791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.93□□□□□ -0.98
NXF3-203ENST00000460791 DHX29Q7Z478 1369 aaKnown RBP8.93□□□□□ -0.98
NXF3-203ENST00000460791 KIF15Q9NS87 1388 aa8.93□□□□□ -0.98
NXF3-203ENST00000460791 ANKRD30AQ9BXX3 1397 aa8.92□□□□□ -0.98
NXF3-203ENST00000460791 CEBPAP49715 358 aaPredicted RBP8.92□□□□□ -0.98
NXF3-203ENST00000460791 PIAS4Q8N2W9 510 aaPredicted RBP8.92□□□□□ -0.98
NXF3-203ENST00000460791 REREQ9P2R6 1566 aa8.91□□□□□ -0.98
NXF3-203ENST00000460791 SHANK2Q9UPX8 1470 aa8.91□□□□□ -0.98
NXF3-203ENST00000460791 NCOA1Q15788 1441 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms