RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 RYDENQ9NUL5 291 aaKnown RBP8.4□□□□□ -1.06
SYPL1-203ENST00000460770 HOXB1P14653 301 aaPredicted RBP8.39□□□□□ -1.07
SYPL1-203ENST00000460770 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
SYPL1-203ENST00000460770 CHGAP10645 457 aaKnown RBP8.37□□□□□ -1.07
SYPL1-203ENST00000460770 TMC2Q8TDI7 906 aa8.37□□□□□ -1.07
SYPL1-203ENST00000460770 TMEM92Q6UXU6 159 aa8.36□□□□□ -1.07
SYPL1-203ENST00000460770 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
SYPL1-203ENST00000460770 ERBB3P21860 1342 aa8.35□□□□□ -1.07
SYPL1-203ENST00000460770 C2orf72A6NCS6 295 aa8.3□□□□□ -1.08
SYPL1-203ENST00000460770 DNAJC5Q9H3Z4 198 aa8.3□□□□□ -1.08
SYPL1-203ENST00000460770 KIF3CO14782 793 aa8.29□□□□□ -1.08
SYPL1-203ENST00000460770 GPR153Q6NV75 609 aa8.28□□□□□ -1.08
SYPL1-203ENST00000460770 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
SYPL1-203ENST00000460770 SLC34A2O95436 690 aa8.26□□□□□ -1.09
SYPL1-203ENST00000460770 DCAF8L2P0C7V8 631 aa8.26□□□□□ -1.09
SYPL1-203ENST00000460770 ARSIQ5FYB1 569 aa8.26□□□□□ -1.09
SYPL1-203ENST00000460770 SPNS2Q8IVW8 549 aa8.26□□□□□ -1.09
SYPL1-203ENST00000460770 PPP1R37O75864 691 aa8.25□□□□□ -1.09
SYPL1-203ENST00000460770 POTEB3A0JP26 581 aa8.23□□□□□ -1.09
SYPL1-203ENST00000460770 POTEBQ6S5H4 581 aa8.23□□□□□ -1.09
SYPL1-203ENST00000460770 ZNF316A6NFI3 1004 aaPredicted RBP8.22□□□□□ -1.09
SYPL1-203ENST00000460770 MMRN1Q13201 1228 aa8.22□□□□□ -1.09
SYPL1-203ENST00000460770 ZNF687Q8N1G0 1237 aa8.22□□□□□ -1.09
SYPL1-203ENST00000460770 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
SYPL1-203ENST00000460770 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
SYPL1-203ENST00000460770 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
SYPL1-203ENST00000460770 PSDA5PKW4 1024 aaPredicted RBP8.21□□□□□ -1.1
SYPL1-203ENST00000460770 TBC1D12O60347 775 aa8.21□□□□□ -1.1
SYPL1-203ENST00000460770 FOXK1P85037 733 aa8.2□□□□□ -1.1
SYPL1-203ENST00000460770 PCDHGA4Q9Y5G9 962 aa8.2□□□□□ -1.1
SYPL1-203ENST00000460770 NUDT7P0C024 238 aa8.18□□□□□ -1.1
SYPL1-203ENST00000460770 PTGER2P43116 358 aa8.18□□□□□ -1.1
SYPL1-203ENST00000460770 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
SYPL1-203ENST00000460770 PLPP6Q8IY26 295 aa8.18□□□□□ -1.1
SYPL1-203ENST00000460770 PBX2P40425 430 aa8.17□□□□□ -1.1
SYPL1-203ENST00000460770 PTCD2Q8WV60 388 aaKnown RBP8.16□□□□□ -1.1
SYPL1-203ENST00000460770 KHSRPQ92945 711 aaKnown RBP eCLIP8.16□□□□□ -1.1
SYPL1-203ENST00000460770 PDE4AP27815 886 aa8.15□□□□□ -1.1
SYPL1-203ENST00000460770 DSG2Q14126 1118 aa8.13□□□□□ -1.11
SYPL1-203ENST00000460770 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
SYPL1-203ENST00000460770 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
SYPL1-203ENST00000460770 AMER1Q5JTC6 1135 aaPredicted RBP8.11□□□□□ -1.11
SYPL1-203ENST00000460770 KCNH8Q96L42 1107 aa8.11□□□□□ -1.11
SYPL1-203ENST00000460770 LSM11P83369 360 aaKnown RBP eCLIP8.1□□□□□ -1.11
SYPL1-203ENST00000460770 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
SYPL1-203ENST00000460770 ANKRD13DQ6ZTN6 518 aa8.1□□□□□ -1.11
SYPL1-203ENST00000460770 CRISPLD2Q9H0B8 497 aa8.1□□□□□ -1.11
SYPL1-203ENST00000460770 MYT1LQ9UL68 1186 aa8.1□□□□□ -1.11
SYPL1-203ENST00000460770 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
SYPL1-203ENST00000460770 RNF166Q96A37 237 aaPredicted RBP8.09□□□□□ -1.11
SYPL1-203ENST00000460770 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
SYPL1-203ENST00000460770 ARHGAP33O14559 1287 aa8.06□□□□□ -1.12
SYPL1-203ENST00000460770 OXER1Q8TDS5 423 aa8.06□□□□□ -1.12
SYPL1-203ENST00000460770 BBXQ8WY36 941 aaPredicted RBP8.05□□□□□ -1.12
SYPL1-203ENST00000460770 LARP6Q9BRS8 491 aaKnown RBP8.05□□□□□ -1.12
SYPL1-203ENST00000460770 KDM4FA0A1W2PPD8 638 aa8.04□□□□□ -1.12
SYPL1-203ENST00000460770 UPF1Q92900 1129 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYPL1-203ENST00000460770 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.04□□□□□ -1.12
SYPL1-203ENST00000460770 NCKAP5LQ9HCH0 1330 aa8.03□□□□□ -1.12
SYPL1-203ENST00000460770 STAC3Q96MF2 364 aa8.01□□□□□ -1.13
SYPL1-203ENST00000460770 TK2O00142 265 aa8□□□□□ -1.13
SYPL1-203ENST00000460770 MAP3K9P80192 1104 aa8□□□□□ -1.13
SYPL1-203ENST00000460770 MFSD10Q14728 455 aa8□□□□□ -1.13
SYPL1-203ENST00000460770 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
SYPL1-203ENST00000460770 ADGRD1Q6QNK2 874 aa7.98□□□□□ -1.13
SYPL1-203ENST00000460770 ZNF454Q8N9F8 522 aa7.98□□□□□ -1.13
SYPL1-203ENST00000460770 EVI5O60447 810 aa7.97□□□□□ -1.13
SYPL1-203ENST00000460770 SPRYD3Q8NCJ5 442 aa7.97□□□□□ -1.13
SYPL1-203ENST00000460770 KCNK17Q96T54 332 aa7.97□□□□□ -1.13
SYPL1-203ENST00000460770 JPH4Q96JJ6 628 aa7.96□□□□□ -1.14
SYPL1-203ENST00000460770 PTPREP23469 700 aa7.95□□□□□ -1.14
SYPL1-203ENST00000460770 POTEEQ6S8J3 1075 aa7.95□□□□□ -1.14
SYPL1-203ENST00000460770 BCL2L12Q9HB09 334 aa7.95□□□□□ -1.14
SYPL1-203ENST00000460770 ANO8Q9HCE9 1232 aaPredicted RBP7.95□□□□□ -1.14
SYPL1-203ENST00000460770 FOSBP53539 338 aa7.94□□□□□ -1.14
SYPL1-203ENST00000460770 PSEN2P49810 448 aa7.93□□□□□ -1.14
SYPL1-203ENST00000460770 HCSTQ9UBK5 93 aa7.93□□□□□ -1.14
SYPL1-203ENST00000460770 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
SYPL1-203ENST00000460770 RTN4Q9NQC3 1192 aaKnown RBP7.92□□□□□ -1.14
SYPL1-203ENST00000460770 DMRTA1Q5VZB9 504 aa7.91□□□□□ -1.14
SYPL1-203ENST00000460770 CADPS2Q86UW7 1296 aa7.91□□□□□ -1.14
SYPL1-203ENST00000460770 FBXW7Q969H0 707 aa7.91□□□□□ -1.14
SYPL1-203ENST00000460770 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
SYPL1-203ENST00000460770 HRO43593 1189 aa7.88□□□□□ -1.15
SYPL1-203ENST00000460770 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
SYPL1-203ENST00000460770 EMILIN3Q9NT22 766 aa7.88□□□□□ -1.15
SYPL1-203ENST00000460770 VPS9D1Q9Y2B5 631 aa7.88□□□□□ -1.15
SYPL1-203ENST00000460770 GOLGA8CPA6NN73 597 aa7.87□□□□□ -1.15
SYPL1-203ENST00000460770 TYW1BQ6NUM6 668 aa7.87□□□□□ -1.15
SYPL1-203ENST00000460770 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
SYPL1-203ENST00000460770 WDR70Q9NW82 654 aa7.87□□□□□ -1.15
SYPL1-203ENST00000460770 PHF14O94880 888 aa7.86□□□□□ -1.15
SYPL1-203ENST00000460770 PAXIP1Q6ZW49 1069 aaPredicted RBP7.86□□□□□ -1.15
SYPL1-203ENST00000460770 EPAS1Q99814 870 aa7.86□□□□□ -1.15
SYPL1-203ENST00000460770 CFAP44Q96MT7 982 aa7.85□□□□□ -1.15
SYPL1-203ENST00000460770 PPP1R3GB7ZBB8 358 aa7.84□□□□□ -1.15
SYPL1-203ENST00000460770 DPYSL4O14531 572 aa7.84□□□□□ -1.15
SYPL1-203ENST00000460770 MRPL50Q8N5N7 158 aaKnown RBP7.84□□□□□ -1.15
SYPL1-203ENST00000460770 ADAM33Q9BZ11 813 aa7.84□□□□□ -1.15
SYPL1-203ENST00000460770 SPDYE16A6NNV3 312 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms