RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
ATRX-204ENST00000460639 TMEM121BQ9BXQ6 578 aaPredicted RBP9.41□□□□□ -0.9
ATRX-204ENST00000460639 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
ATRX-204ENST00000460639 PDE4AP27815 886 aa9.4□□□□□ -0.9
ATRX-204ENST00000460639 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
ATRX-204ENST00000460639 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
ATRX-204ENST00000460639 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
ATRX-204ENST00000460639 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
ATRX-204ENST00000460639 C2orf72A6NCS6 295 aa9.36□□□□□ -0.91
ATRX-204ENST00000460639 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
ATRX-204ENST00000460639 DSG2Q14126 1118 aa9.35□□□□□ -0.91
ATRX-204ENST00000460639 MFSD10Q14728 455 aa9.35□□□□□ -0.91
ATRX-204ENST00000460639 C3orf67Q6ZVT6 689 aa9.35□□□□□ -0.91
ATRX-204ENST00000460639 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
ATRX-204ENST00000460639 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
ATRX-204ENST00000460639 PPP1R15BQ5SWA1 713 aa9.34□□□□□ -0.91
ATRX-204ENST00000460639 BCANQ96GW7 911 aa9.33□□□□□ -0.92
ATRX-204ENST00000460639 E2F4Q16254 413 aa9.32□□□□□ -0.92
ATRX-204ENST00000460639 KIF3CO14782 793 aa9.3□□□□□ -0.92
ATRX-204ENST00000460639 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
ATRX-204ENST00000460639 PLPP6Q8IY26 295 aa9.3□□□□□ -0.92
ATRX-204ENST00000460639 NBR1Q14596 966 aa9.29□□□□□ -0.92
ATRX-204ENST00000460639 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
ATRX-204ENST00000460639 FOXK1P85037 733 aa9.28□□□□□ -0.92
ATRX-204ENST00000460639 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
ATRX-204ENST00000460639 CAMK2BQ13554 666 aa9.25□□□□□ -0.93
ATRX-204ENST00000460639 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
ATRX-204ENST00000460639 DPYSL4O14531 572 aa9.22□□□□□ -0.93
ATRX-204ENST00000460639 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
ATRX-204ENST00000460639 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
ATRX-204ENST00000460639 SLAIN1Q8ND83 568 aa9.21□□□□□ -0.94
ATRX-204ENST00000460639 SCUBE2Q9NQ36 999 aa9.21□□□□□ -0.94
ATRX-204ENST00000460639 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
ATRX-204ENST00000460639 TIMELESSQ9UNS1 1208 aa9.19□□□□□ -0.94
ATRX-204ENST00000460639 SEMA3EO15041 775 aa9.18□□□□□ -0.94
ATRX-204ENST00000460639 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
ATRX-204ENST00000460639 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
ATRX-204ENST00000460639 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
ATRX-204ENST00000460639 OTUD5Q96G74 571 aa9.14□□□□□ -0.95
ATRX-204ENST00000460639 ARIH1Q9Y4X5 557 aaPredicted RBP9.13□□□□□ -0.95
ATRX-204ENST00000460639 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
ATRX-204ENST00000460639 PDIA6Q15084 440 aa9.1□□□□□ -0.95
ATRX-204ENST00000460639 TESPA1A2RU30 521 aaPredicted RBP9.09□□□□□ -0.95
ATRX-204ENST00000460639 HOXB3P14651 431 aaPredicted RBP9.09□□□□□ -0.95
ATRX-204ENST00000460639 PTCD2Q8WV60 388 aaKnown RBP9.09□□□□□ -0.95
ATRX-204ENST00000460639 KHSRPQ92945 711 aaKnown RBP eCLIP9.09□□□□□ -0.95
ATRX-204ENST00000460639 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
ATRX-204ENST00000460639 EVI5O60447 810 aa9.08□□□□□ -0.96
ATRX-204ENST00000460639 SLC34A2O95436 690 aa9.07□□□□□ -0.96
ATRX-204ENST00000460639 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
ATRX-204ENST00000460639 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
ATRX-204ENST00000460639 TBC1D12O60347 775 aa9.06□□□□□ -0.96
ATRX-204ENST00000460639 ARSIQ5FYB1 569 aa9.06□□□□□ -0.96
ATRX-204ENST00000460639 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
ATRX-204ENST00000460639 DDX12PQ92771 950 aa9.06□□□□□ -0.96
ATRX-204ENST00000460639 DOK7Q18PE1 504 aa9.05□□□□□ -0.96
ATRX-204ENST00000460639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATRX-204ENST00000460639 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
ATRX-204ENST00000460639 NUDT7P0C024 238 aa9.03□□□□□ -0.96
ATRX-204ENST00000460639 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.97
ATRX-204ENST00000460639 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
ATRX-204ENST00000460639 POTEMA6NI47 508 aa9.01□□□□□ -0.97
ATRX-204ENST00000460639 ARXQ96QS3 562 aa9.01□□□□□ -0.97
ATRX-204ENST00000460639 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
ATRX-204ENST00000460639 RIMBP2O15034 1052 aa9□□□□□ -0.97
ATRX-204ENST00000460639 SMYD5Q6GMV2 418 aa8.99□□□□□ -0.97
ATRX-204ENST00000460639 GPR153Q6NV75 609 aa8.99□□□□□ -0.97
ATRX-204ENST00000460639 SNPHO15079 494 aa8.98□□□□□ -0.97
ATRX-204ENST00000460639 PRIM1P49642 420 aaKnown RBP8.98□□□□□ -0.97
ATRX-204ENST00000460639 KDM4FA0A1W2PPD8 638 aa8.97□□□□□ -0.97
ATRX-204ENST00000460639 ANO8Q9HCE9 1232 aaPredicted RBP8.97□□□□□ -0.97
ATRX-204ENST00000460639 PTGER2P43116 358 aa8.96□□□□□ -0.98
ATRX-204ENST00000460639 OSBPP22059 807 aa8.95□□□□□ -0.98
ATRX-204ENST00000460639 RBM33Q96EV2 1170 aaKnown RBP8.95□□□□□ -0.98
ATRX-204ENST00000460639 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
ATRX-204ENST00000460639 POTEGQ6S5H5 508 aa8.94□□□□□ -0.98
ATRX-204ENST00000460639 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
ATRX-204ENST00000460639 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
ATRX-204ENST00000460639 NUTM2FA1L443 756 aa8.93□□□□□ -0.98
ATRX-204ENST00000460639 HOXB1P14653 301 aaPredicted RBP8.93□□□□□ -0.98
ATRX-204ENST00000460639 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
ATRX-204ENST00000460639 ZNF454Q8N9F8 522 aa8.93□□□□□ -0.98
ATRX-204ENST00000460639 ZC3H15Q8WU90 426 aaKnown RBP8.92□□□□□ -0.98
ATRX-204ENST00000460639 FAM163AQ96GL9 167 aaPredicted RBP8.92□□□□□ -0.98
ATRX-204ENST00000460639 PHF14O94880 888 aa8.91□□□□□ -0.98
ATRX-204ENST00000460639 ST18O60284 1047 aa8.9□□□□□ -0.98
ATRX-204ENST00000460639 FOSBP53539 338 aa8.9□□□□□ -0.98
ATRX-204ENST00000460639 JPH4Q96JJ6 628 aa8.9□□□□□ -0.98
ATRX-204ENST00000460639 CDHR5Q9HBB8 845 aa8.9□□□□□ -0.98
ATRX-204ENST00000460639 MAP3K7O43318 606 aa8.89□□□□□ -0.99
ATRX-204ENST00000460639 TSR1Q2NL82 804 aaKnown RBP8.89□□□□□ -0.99
ATRX-204ENST00000460639 MARVELD3Q96A59 401 aa8.89□□□□□ -0.99
ATRX-204ENST00000460639 EN1Q05925 392 aaPredicted RBP8.88□□□□□ -0.99
ATRX-204ENST00000460639 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
ATRX-204ENST00000460639 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
ATRX-204ENST00000460639 EPAS1Q99814 870 aa8.87□□□□□ -0.99
ATRX-204ENST00000460639 ADAM33Q9BZ11 813 aa8.87□□□□□ -0.99
ATRX-204ENST00000460639 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
ATRX-204ENST00000460639 GPR37O15354 613 aa8.85□□□□□ -0.99
ATRX-204ENST00000460639 EMP3P54852 163 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms