RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 MYOM3Q5VTT5 1437 aa25.05■■□□□ 1.6
YIPF3-205ENST00000460547 COL17A1Q9UMD9 1497 aaPredicted RBP25.04■■□□□ 1.6
YIPF3-205ENST00000460547 SETD5Q9C0A6 1442 aa25.01■■□□□ 1.59
YIPF3-205ENST00000460547 RAB3GAP2Q9H2M9 1393 aa25■■□□□ 1.59
YIPF3-205ENST00000460547 FAM50AQ14320 339 aaKnown RBP25■■□□□ 1.59
YIPF3-205ENST00000460547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.97■■□□□ 1.59
YIPF3-205ENST00000460547 ITGAEP38570 1179 aa24.97■■□□□ 1.59
YIPF3-205ENST00000460547 TROQ12816 1431 aaPredicted RBP24.96■■□□□ 1.59
YIPF3-205ENST00000460547 TCOF1Q13428 1488 aaKnown RBP24.94■■□□□ 1.58
YIPF3-205ENST00000460547 NEO1Q92859 1461 aa24.94■■□□□ 1.58
YIPF3-205ENST00000460547 PTPN23Q9H3S7 1636 aa24.92■■□□□ 1.58
YIPF3-205ENST00000460547 ARAP3Q8WWN8 1544 aa24.92■■□□□ 1.58
YIPF3-205ENST00000460547 AEBP2Q6ZN18 517 aaPredicted RBP24.91■■□□□ 1.58
YIPF3-205ENST00000460547 TTC37Q6PGP7 1564 aa24.89■■□□□ 1.58
YIPF3-205ENST00000460547 MIA2Q96PC5 1412 aa24.89■■□□□ 1.58
YIPF3-205ENST00000460547 PLCH2O75038 1416 aa24.89■■□□□ 1.57
YIPF3-205ENST00000460547 FANCAO15360 1455 aa24.88■■□□□ 1.57
YIPF3-205ENST00000460547 RAPGEF3O95398 923 aa24.88■■□□□ 1.57
YIPF3-205ENST00000460547 KIF14Q15058 1648 aa24.87■■□□□ 1.57
YIPF3-205ENST00000460547 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
YIPF3-205ENST00000460547 AKNAQ7Z591 1439 aa24.87■■□□□ 1.57
YIPF3-205ENST00000460547 HFM1A2PYH4 1435 aa24.84■■□□□ 1.57
YIPF3-205ENST00000460547 PTPRKQ15262 1439 aa24.82■■□□□ 1.56
YIPF3-205ENST00000460547 CFAP74Q9C0B2 1584 aa24.81■■□□□ 1.56
YIPF3-205ENST00000460547 DENND4BO75064 1496 aaPredicted RBP24.79■■□□□ 1.56
YIPF3-205ENST00000460547 ZNF316A6NFI3 1004 aaPredicted RBP24.77■■□□□ 1.56
YIPF3-205ENST00000460547 MYO5CQ9NQX4 1742 aa24.76■■□□□ 1.55
YIPF3-205ENST00000460547 ADGRL1O94910 1474 aa24.75■■□□□ 1.55
YIPF3-205ENST00000460547 SCAPERQ9BY12 1400 aa24.75■■□□□ 1.55
YIPF3-205ENST00000460547 ARHGAP5Q13017 1502 aa24.75■■□□□ 1.55
YIPF3-205ENST00000460547 NAIPQ13075 1403 aa24.74■■□□□ 1.55
YIPF3-205ENST00000460547 KDM4FA0A1W2PPD8 638 aa24.73■■□□□ 1.55
YIPF3-205ENST00000460547 GCC2Q8IWJ2 1684 aa24.71■■□□□ 1.55
YIPF3-205ENST00000460547 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
YIPF3-205ENST00000460547 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
YIPF3-205ENST00000460547 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
YIPF3-205ENST00000460547 CFDP1Q9UEE9 299 aaPredicted RBP24.66■■□□□ 1.54
YIPF3-205ENST00000460547 DNMT1P26358 1616 aaKnown RBP24.65■■□□□ 1.54
YIPF3-205ENST00000460547 POGZQ7Z3K3 1410 aa24.64■■□□□ 1.54
YIPF3-205ENST00000460547 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.53
YIPF3-205ENST00000460547 MYT1LQ9UL68 1186 aa24.64■■□□□ 1.53
YIPF3-205ENST00000460547 GPATCH8Q9UKJ3 1502 aaKnown RBP24.64■■□□□ 1.53
YIPF3-205ENST00000460547 AFAP1Q8N556 730 aa24.63■■□□□ 1.53
YIPF3-205ENST00000460547 RICTORQ6R327 1708 aa24.63■■□□□ 1.53
YIPF3-205ENST00000460547 CDC42BPBQ9Y5S2 1711 aa24.63■■□□□ 1.53
YIPF3-205ENST00000460547 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
YIPF3-205ENST00000460547 PREX2Q70Z35 1606 aa24.62■■□□□ 1.53
YIPF3-205ENST00000460547 MAGI2Q86UL8 1455 aa24.6■■□□□ 1.53
YIPF3-205ENST00000460547 DAPK1P53355 1430 aa24.6■■□□□ 1.53
YIPF3-205ENST00000460547 ROCK1Q13464 1354 aa24.6■■□□□ 1.53
YIPF3-205ENST00000460547 ZNF518AQ6AHZ1 1483 aa24.59■■□□□ 1.53
YIPF3-205ENST00000460547 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
YIPF3-205ENST00000460547 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.52
YIPF3-205ENST00000460547 ZMYM4Q5VZL5 1548 aa24.57■■□□□ 1.52
YIPF3-205ENST00000460547 ABCC5O15440 1437 aa24.55■■□□□ 1.52
YIPF3-205ENST00000460547 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
YIPF3-205ENST00000460547 YEATS2Q9ULM3 1422 aa24.55■■□□□ 1.52
YIPF3-205ENST00000460547 CAMSAP2Q08AD1 1489 aa24.54■■□□□ 1.52
YIPF3-205ENST00000460547 HNRNPMP52272 730 aaKnown RBP eCLIP24.54■■□□□ 1.52
YIPF3-205ENST00000460547 ACIN1Q9UKV3 1341 aaKnown RBP24.54■■□□□ 1.52
YIPF3-205ENST00000460547 ARHGEF40Q8TER5 1519 aa24.53■■□□□ 1.52
YIPF3-205ENST00000460547 ABCC1P33527 1531 aa24.52■■□□□ 1.52
YIPF3-205ENST00000460547 TRAPPC8Q9Y2L5 1435 aa24.52■■□□□ 1.52
YIPF3-205ENST00000460547 ARHGEF12Q9NZN5 1544 aa24.51■■□□□ 1.51
YIPF3-205ENST00000460547 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
YIPF3-205ENST00000460547 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
YIPF3-205ENST00000460547 ATP10AO60312 1499 aa24.48■■□□□ 1.51
YIPF3-205ENST00000460547 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
YIPF3-205ENST00000460547 CROCC2H7BZ55 1655 aa24.47■■□□□ 1.51
YIPF3-205ENST00000460547 ZNF644Q9H582 1327 aaPredicted RBP24.47■■□□□ 1.51
YIPF3-205ENST00000460547 KDM5CP41229 1560 aa24.47■■□□□ 1.51
YIPF3-205ENST00000460547 ADGRL2O95490 1459 aa24.46■■□□□ 1.51
YIPF3-205ENST00000460547 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
YIPF3-205ENST00000460547 RRP7BPQ9NSQ0 103 aa24.46■■□□□ 1.51
YIPF3-205ENST00000460547 MLH3Q9UHC1 1453 aa24.46■■□□□ 1.51
YIPF3-205ENST00000460547 CHIC2Q9UKJ5 165 aa24.45■■□□□ 1.5
YIPF3-205ENST00000460547 SYCP2Q9BX26 1530 aa24.44■■□□□ 1.5
YIPF3-205ENST00000460547 SPAG9O60271 1321 aaKnown RBP24.44■■□□□ 1.5
YIPF3-205ENST00000460547 MLECQ14165 292 aa24.43■■□□□ 1.5
YIPF3-205ENST00000460547 C9orf84Q5VXU9 1444 aa24.43■■□□□ 1.5
YIPF3-205ENST00000460547 SIN3AQ96ST3 1273 aa24.43■■□□□ 1.5
YIPF3-205ENST00000460547 HECW2Q9P2P5 1572 aa24.42■■□□□ 1.5
YIPF3-205ENST00000460547 SHANK2Q9UPX8 1470 aa24.41■■□□□ 1.5
YIPF3-205ENST00000460547 RSPH4AQ5TD94 716 aa24.38■■□□□ 1.49
YIPF3-205ENST00000460547 BCORL1Q5H9F3 1711 aa24.37■■□□□ 1.49
YIPF3-205ENST00000460547 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
YIPF3-205ENST00000460547 ARHGEF5Q12774 1597 aa24.35■■□□□ 1.49
YIPF3-205ENST00000460547 NEUROD1Q13562 356 aa24.35■■□□□ 1.49
YIPF3-205ENST00000460547 ADAMTSL3P82987 1691 aa24.34■■□□□ 1.49
YIPF3-205ENST00000460547 DIP2CQ9Y2E4 1556 aa24.34■■□□□ 1.49
YIPF3-205ENST00000460547 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
YIPF3-205ENST00000460547 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
YIPF3-205ENST00000460547 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
YIPF3-205ENST00000460547 KIDINS220Q9ULH0 1771 aa24.31■■□□□ 1.48
YIPF3-205ENST00000460547 TONSLQ96HA7 1378 aa24.31■■□□□ 1.48
YIPF3-205ENST00000460547 PTPRMP28827 1452 aa24.31■■□□□ 1.48
YIPF3-205ENST00000460547 ABCA6Q8N139 1617 aa24.3■■□□□ 1.48
YIPF3-205ENST00000460547 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
YIPF3-205ENST00000460547 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
YIPF3-205ENST00000460547 SIGLEC1Q9BZZ2 1709 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms