RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
CKAP2-204ENST00000459902 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
CKAP2-204ENST00000459902 MFSD10Q14728 455 aa15.16■□□□□ 0.02
CKAP2-204ENST00000459902 DDX27Q96GQ7 796 aaKnown RBP15.13■□□□□ 0.01
CKAP2-204ENST00000459902 TMEM92Q6UXU6 159 aa15.11■□□□□ 0.01
CKAP2-204ENST00000459902 TMC2Q8TDI7 906 aa15.11■□□□□ 0.01
CKAP2-204ENST00000459902 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
CKAP2-204ENST00000459902 KIF3CO14782 793 aa15.09■□□□□ 0.01
CKAP2-204ENST00000459902 POTEB2H3BUK9 544 aa15.08■□□□□ 0
CKAP2-204ENST00000459902 E2F4Q16254 413 aa15.08■□□□□ 0
CKAP2-204ENST00000459902 KCNV2Q8TDN2 545 aa15.08■□□□□ 0
CKAP2-204ENST00000459902 BCANQ96GW7 911 aa15.08■□□□□ 0
CKAP2-204ENST00000459902 POTEJP0CG39 1038 aa15.07■□□□□ 0
CKAP2-204ENST00000459902 DSG2Q14126 1118 aa15.07■□□□□ 0
CKAP2-204ENST00000459902 PPP1R15BQ5SWA1 713 aa15.07■□□□□ 0
CKAP2-204ENST00000459902 P3H3Q8IVL6 736 aa15.07■□□□□ 0
CKAP2-204ENST00000459902 C3orf67Q6ZVT6 689 aa15.06■□□□□ 0
CKAP2-204ENST00000459902 FOXK1P85037 733 aa15.05■□□□□ -0
CKAP2-204ENST00000459902 CAMK2BQ13554 666 aa15.01□□□□□ -0.01
CKAP2-204ENST00000459902 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.01□□□□□ -0.01
CKAP2-204ENST00000459902 PLPP6Q8IY26 295 aa14.99□□□□□ -0.01
CKAP2-204ENST00000459902 ARHGEF1Q92888 912 aaKnown RBP14.97□□□□□ -0.01
CKAP2-204ENST00000459902 NBR1Q14596 966 aa14.96□□□□□ -0.01
CKAP2-204ENST00000459902 EMILIN3Q9NT22 766 aa14.92□□□□□ -0.02
CKAP2-204ENST00000459902 ARIH1Q9Y4X5 557 aaPredicted RBP14.91□□□□□ -0.02
CKAP2-204ENST00000459902 MAMSTRQ6ZN01 415 aa14.88□□□□□ -0.03
CKAP2-204ENST00000459902 SCUBE2Q9NQ36 999 aa14.87□□□□□ -0.03
CKAP2-204ENST00000459902 SLAIN1Q8ND83 568 aa14.84□□□□□ -0.03
CKAP2-204ENST00000459902 DPYSL4O14531 572 aa14.83□□□□□ -0.04
CKAP2-204ENST00000459902 UPF1Q92900 1129 aaKnown RBP eCLIP14.8□□□□□ -0.04
CKAP2-204ENST00000459902 OXER1Q8TDS5 423 aa14.79□□□□□ -0.04
CKAP2-204ENST00000459902 SEMA3EO15041 775 aa14.78□□□□□ -0.04
CKAP2-204ENST00000459902 LHX8Q68G74 356 aa14.78□□□□□ -0.04
CKAP2-204ENST00000459902 SLC34A2O95436 690 aa14.77□□□□□ -0.05
CKAP2-204ENST00000459902 MAP3K9P80192 1104 aa14.77□□□□□ -0.05
CKAP2-204ENST00000459902 OTUD5Q96G74 571 aa14.77□□□□□ -0.05
CKAP2-204ENST00000459902 PTCD2Q8WV60 388 aaKnown RBP14.75□□□□□ -0.05
CKAP2-204ENST00000459902 PDIA6Q15084 440 aa14.73□□□□□ -0.05
CKAP2-204ENST00000459902 TESPA1A2RU30 521 aaPredicted RBP14.72□□□□□ -0.05
CKAP2-204ENST00000459902 SPDYE16A6NNV3 312 aaPredicted RBP14.72□□□□□ -0.05
CKAP2-204ENST00000459902 HOXB3P14651 431 aaPredicted RBP14.7□□□□□ -0.06
CKAP2-204ENST00000459902 TBC1D12O60347 775 aa14.69□□□□□ -0.06
CKAP2-204ENST00000459902 PCDHGA4Q9Y5G9 962 aa14.67□□□□□ -0.06
CKAP2-204ENST00000459902 MLLT3P42568 568 aaPredicted RBP14.66□□□□□ -0.06
CKAP2-204ENST00000459902 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
CKAP2-204ENST00000459902 EVI5O60447 810 aa14.64□□□□□ -0.07
CKAP2-204ENST00000459902 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.64□□□□□ -0.07
CKAP2-204ENST00000459902 TULP1O00294 542 aaPredicted RBP14.59□□□□□ -0.07
CKAP2-204ENST00000459902 SMYD5Q6GMV2 418 aa14.59□□□□□ -0.07
CKAP2-204ENST00000459902 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
CKAP2-204ENST00000459902 SNPHO15079 494 aa14.58□□□□□ -0.08
CKAP2-204ENST00000459902 PTGER2P43116 358 aa14.58□□□□□ -0.08
CKAP2-204ENST00000459902 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
CKAP2-204ENST00000459902 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
CKAP2-204ENST00000459902 KDM4FA0A1W2PPD8 638 aa14.57□□□□□ -0.08
CKAP2-204ENST00000459902 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
CKAP2-204ENST00000459902 GPR153Q6NV75 609 aa14.57□□□□□ -0.08
CKAP2-204ENST00000459902 ZNF710Q8N1W2 664 aa14.57□□□□□ -0.08
CKAP2-204ENST00000459902 KHSRPQ92945 711 aaKnown RBP eCLIP14.57□□□□□ -0.08
CKAP2-204ENST00000459902 ZSWIM6Q9HCJ5 1215 aa14.57□□□□□ -0.08
CKAP2-204ENST00000459902 TPRNQ4KMQ1 711 aa14.56□□□□□ -0.08
CKAP2-204ENST00000459902 GRXCR2A6NFK2 248 aa14.55□□□□□ -0.08
CKAP2-204ENST00000459902 PRKCSHP14314 528 aaPredicted RBP14.55□□□□□ -0.08
CKAP2-204ENST00000459902 DDX12PQ92771 950 aa14.55□□□□□ -0.08
CKAP2-204ENST00000459902 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
CKAP2-204ENST00000459902 NUDT7P0C024 238 aa14.52□□□□□ -0.09
CKAP2-204ENST00000459902 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
CKAP2-204ENST00000459902 OSBPP22059 807 aa14.48□□□□□ -0.09
CKAP2-204ENST00000459902 HOXB1P14653 301 aaPredicted RBP14.45□□□□□ -0.1
CKAP2-204ENST00000459902 PHF14O94880 888 aa14.44□□□□□ -0.1
CKAP2-204ENST00000459902 PRIM1P49642 420 aaKnown RBP14.43□□□□□ -0.1
CKAP2-204ENST00000459902 PCDHGA10Q9Y5H3 936 aa14.43□□□□□ -0.1
CKAP2-204ENST00000459902 JPH4Q96JJ6 628 aa14.41□□□□□ -0.1
CKAP2-204ENST00000459902 FOSBP53539 338 aa14.4□□□□□ -0.1
CKAP2-204ENST00000459902 ZC3H15Q8WU90 426 aaKnown RBP14.4□□□□□ -0.1
CKAP2-204ENST00000459902 EPAS1Q99814 870 aa14.4□□□□□ -0.1
CKAP2-204ENST00000459902 LHX6Q9UPM6 363 aa14.4□□□□□ -0.1
CKAP2-204ENST00000459902 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
CKAP2-204ENST00000459902 GPIHBP1Q8IV16 184 aa14.37□□□□□ -0.11
CKAP2-204ENST00000459902 ZNF454Q8N9F8 522 aa14.37□□□□□ -0.11
CKAP2-204ENST00000459902 ST18O60284 1047 aa14.36□□□□□ -0.11
CKAP2-204ENST00000459902 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
CKAP2-204ENST00000459902 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
CKAP2-204ENST00000459902 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
CKAP2-204ENST00000459902 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
CKAP2-204ENST00000459902 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
CKAP2-204ENST00000459902 ZDHHC16Q969W1 377 aa14.32□□□□□ -0.12
CKAP2-204ENST00000459902 MAP3K7O43318 606 aa14.31□□□□□ -0.12
CKAP2-204ENST00000459902 PSDA5PKW4 1024 aaPredicted RBP14.29□□□□□ -0.12
CKAP2-204ENST00000459902 GPR37O15354 613 aa14.29□□□□□ -0.12
CKAP2-204ENST00000459902 ZMYND10O75800 440 aa14.29□□□□□ -0.12
CKAP2-204ENST00000459902 TSR1Q2NL82 804 aaKnown RBP14.28□□□□□ -0.12
CKAP2-204ENST00000459902 ADAM33Q9BZ11 813 aa14.28□□□□□ -0.12
CKAP2-204ENST00000459902 PPP4R3BQ5MIZ7 849 aa14.27□□□□□ -0.13
CKAP2-204ENST00000459902 CDHR5Q9HBB8 845 aa14.27□□□□□ -0.13
CKAP2-204ENST00000459902 MARVELD3Q96A59 401 aa14.26□□□□□ -0.13
CKAP2-204ENST00000459902 C6orf132Q5T0Z8 1188 aa14.25□□□□□ -0.13
CKAP2-204ENST00000459902 PTGDRQ13258 359 aa14.24□□□□□ -0.13
CKAP2-204ENST00000459902 BARGINQ6ZT62 677 aa14.24□□□□□ -0.13
CKAP2-204ENST00000459902 NPDC1Q9NQX5 325 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms