RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 TMC2Q8TDI7 906 aa14.67□□□□□ -0.06
CCDC66-209ENST00000459746 GPHNQ9NQX3 736 aaPredicted RBP14.64□□□□□ -0.07
CCDC66-209ENST00000459746 KIF3CO14782 793 aa14.61□□□□□ -0.07
CCDC66-209ENST00000459746 CRISPLD2Q9H0B8 497 aa14.61□□□□□ -0.07
CCDC66-209ENST00000459746 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
CCDC66-209ENST00000459746 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
CCDC66-209ENST00000459746 C2orf72A6NCS6 295 aa14.59□□□□□ -0.07
CCDC66-209ENST00000459746 SNPHO15079 494 aa14.58□□□□□ -0.08
CCDC66-209ENST00000459746 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
CCDC66-209ENST00000459746 CADPS2Q86UW7 1296 aa14.58□□□□□ -0.08
CCDC66-209ENST00000459746 FOXK1P85037 733 aa14.56□□□□□ -0.08
CCDC66-209ENST00000459746 NCKAP5LQ9HCH0 1330 aa14.56□□□□□ -0.08
CCDC66-209ENST00000459746 LARP6Q9BRS8 491 aaKnown RBP14.55□□□□□ -0.08
CCDC66-209ENST00000459746 MFSD10Q14728 455 aa14.51□□□□□ -0.09
CCDC66-209ENST00000459746 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
CCDC66-209ENST00000459746 WDR70Q9NW82 654 aa14.5□□□□□ -0.09
CCDC66-209ENST00000459746 DSG2Q14126 1118 aa14.48□□□□□ -0.09
CCDC66-209ENST00000459746 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
CCDC66-209ENST00000459746 PLPP6Q8IY26 295 aa14.47□□□□□ -0.09
CCDC66-209ENST00000459746 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
CCDC66-209ENST00000459746 POTEMA6NI47 508 aa14.46□□□□□ -0.09
CCDC66-209ENST00000459746 DOK7Q18PE1 504 aa14.46□□□□□ -0.09
CCDC66-209ENST00000459746 SLC34A2O95436 690 aa14.43□□□□□ -0.1
CCDC66-209ENST00000459746 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
CCDC66-209ENST00000459746 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
CCDC66-209ENST00000459746 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
CCDC66-209ENST00000459746 PLSCR2Q9NRY7 297 aa14.39□□□□□ -0.11
CCDC66-209ENST00000459746 HOXB3P14651 431 aaPredicted RBP14.38□□□□□ -0.11
CCDC66-209ENST00000459746 ZNF710Q8N1W2 664 aa14.38□□□□□ -0.11
CCDC66-209ENST00000459746 TBC1D12O60347 775 aa14.35□□□□□ -0.11
CCDC66-209ENST00000459746 CAMK2BQ13554 666 aa14.35□□□□□ -0.11
CCDC66-209ENST00000459746 E2F4Q16254 413 aa14.35□□□□□ -0.11
CCDC66-209ENST00000459746 PTCD2Q8WV60 388 aaKnown RBP14.34□□□□□ -0.11
CCDC66-209ENST00000459746 LCE2DQ5TA82 110 aaPredicted RBP14.31□□□□□ -0.12
CCDC66-209ENST00000459746 FAM163AQ96GL9 167 aaPredicted RBP14.31□□□□□ -0.12
CCDC66-209ENST00000459746 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
CCDC66-209ENST00000459746 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
CCDC66-209ENST00000459746 PCDH10Q9P2E7 1040 aa14.3□□□□□ -0.12
CCDC66-209ENST00000459746 P3H3Q8IVL6 736 aa14.28□□□□□ -0.12
CCDC66-209ENST00000459746 OXER1Q8TDS5 423 aa14.28□□□□□ -0.12
CCDC66-209ENST00000459746 ST18O60284 1047 aa14.26□□□□□ -0.13
CCDC66-209ENST00000459746 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
CCDC66-209ENST00000459746 HOXB1P14653 301 aaPredicted RBP14.25□□□□□ -0.13
CCDC66-209ENST00000459746 GPR153Q6NV75 609 aa14.25□□□□□ -0.13
CCDC66-209ENST00000459746 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
CCDC66-209ENST00000459746 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
CCDC66-209ENST00000459746 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
CCDC66-209ENST00000459746 ARSIQ5FYB1 569 aa14.22□□□□□ -0.13
CCDC66-209ENST00000459746 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
CCDC66-209ENST00000459746 UPF1Q92900 1129 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC66-209ENST00000459746 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
CCDC66-209ENST00000459746 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
CCDC66-209ENST00000459746 KCNV2Q8TDN2 545 aa14.15□□□□□ -0.14
CCDC66-209ENST00000459746 DPYSL4O14531 572 aa14.14□□□□□ -0.15
CCDC66-209ENST00000459746 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
CCDC66-209ENST00000459746 KDM4FA0A1W2PPD8 638 aa14.13□□□□□ -0.15
CCDC66-209ENST00000459746 EVI5O60447 810 aa14.12□□□□□ -0.15
CCDC66-209ENST00000459746 NUDT7P0C024 238 aa14.12□□□□□ -0.15
CCDC66-209ENST00000459746 EMP3P54852 163 aa14.11□□□□□ -0.15
CCDC66-209ENST00000459746 PSDA5PKW4 1024 aaPredicted RBP14.1□□□□□ -0.15
CCDC66-209ENST00000459746 KHSRPQ92945 711 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC66-209ENST00000459746 PDIA6Q15084 440 aa14.09□□□□□ -0.15
CCDC66-209ENST00000459746 MARVELD3Q96A59 401 aa14.07□□□□□ -0.16
CCDC66-209ENST00000459746 ERBB3P21860 1342 aa14.06□□□□□ -0.16
CCDC66-209ENST00000459746 PTGER2P43116 358 aa14.04□□□□□ -0.16
CCDC66-209ENST00000459746 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
CCDC66-209ENST00000459746 FAM205CA6NFA0 338 aa14□□□□□ -0.17
CCDC66-209ENST00000459746 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
CCDC66-209ENST00000459746 VARS2Q5ST30 1063 aaKnown RBP13.97□□□□□ -0.17
CCDC66-209ENST00000459746 CDAN1Q8IWY9 1227 aa13.97□□□□□ -0.17
CCDC66-209ENST00000459746 JPH4Q96JJ6 628 aa13.97□□□□□ -0.17
CCDC66-209ENST00000459746 PHF14O94880 888 aa13.96□□□□□ -0.17
CCDC66-209ENST00000459746 FOSBP53539 338 aa13.96□□□□□ -0.17
CCDC66-209ENST00000459746 HS3ST6Q96QI5 342 aa13.96□□□□□ -0.17
CCDC66-209ENST00000459746 EPAS1Q99814 870 aa13.95□□□□□ -0.18
CCDC66-209ENST00000459746 ZNF454Q8N9F8 522 aa13.93□□□□□ -0.18
CCDC66-209ENST00000459746 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
CCDC66-209ENST00000459746 ZNF687Q8N1G0 1237 aa13.92□□□□□ -0.18
CCDC66-209ENST00000459746 SMYD5Q6GMV2 418 aa13.91□□□□□ -0.18
CCDC66-209ENST00000459746 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
CCDC66-209ENST00000459746 DDX12PQ92771 950 aa13.9□□□□□ -0.18
CCDC66-209ENST00000459746 ZDHHC16Q969W1 377 aa13.9□□□□□ -0.18
CCDC66-209ENST00000459746 PCDHGA10Q9Y5H3 936 aa13.9□□□□□ -0.18
CCDC66-209ENST00000459746 NBR1Q14596 966 aa13.89□□□□□ -0.19
CCDC66-209ENST00000459746 SEMA3EO15041 775 aa13.88□□□□□ -0.19
CCDC66-209ENST00000459746 GRXCR2A6NFK2 248 aa13.87□□□□□ -0.19
CCDC66-209ENST00000459746 PBX2P40425 430 aa13.87□□□□□ -0.19
CCDC66-209ENST00000459746 POTEB3A0JP26 581 aa13.86□□□□□ -0.19
CCDC66-209ENST00000459746 TESPA1A2RU30 521 aaPredicted RBP13.86□□□□□ -0.19
CCDC66-209ENST00000459746 POTEBQ6S5H4 581 aa13.86□□□□□ -0.19
CCDC66-209ENST00000459746 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
CCDC66-209ENST00000459746 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
CCDC66-209ENST00000459746 BCL2L12Q9HB09 334 aa13.85□□□□□ -0.19
CCDC66-209ENST00000459746 ARHGAP33O14559 1287 aa13.81□□□□□ -0.2
CCDC66-209ENST00000459746 OSBPP22059 807 aa13.81□□□□□ -0.2
CCDC66-209ENST00000459746 MLLT3P42568 568 aaPredicted RBP13.81□□□□□ -0.2
CCDC66-209ENST00000459746 PTPREP23469 700 aa13.8□□□□□ -0.2
CCDC66-209ENST00000459746 EN1Q05925 392 aaPredicted RBP13.79□□□□□ -0.2
CCDC66-209ENST00000459746 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
CCDC66-209ENST00000459746 BCANQ96GW7 911 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms