RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 RIMBP2O15034 1052 aa8.14□□□□□ -1.11
HMGB3P30-201ENST00000457863 ZNF710Q8N1W2 664 aa8.14□□□□□ -1.11
HMGB3P30-201ENST00000457863 ZSWIM6Q9HCJ5 1215 aa8.13□□□□□ -1.11
HMGB3P30-201ENST00000457863 DNAJC5Q9H3Z4 198 aa8.12□□□□□ -1.11
HMGB3P30-201ENST00000457863 KIF3CO14782 793 aa8.11□□□□□ -1.11
HMGB3P30-201ENST00000457863 HS3ST6Q96QI5 342 aa8.11□□□□□ -1.11
HMGB3P30-201ENST00000457863 POTEB3A0JP26 581 aa8.1□□□□□ -1.11
HMGB3P30-201ENST00000457863 POTEBQ6S5H4 581 aa8.1□□□□□ -1.11
HMGB3P30-201ENST00000457863 FAM205CA6NFA0 338 aa8.09□□□□□ -1.11
HMGB3P30-201ENST00000457863 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
HMGB3P30-201ENST00000457863 C2orf72A6NCS6 295 aa8.06□□□□□ -1.12
HMGB3P30-201ENST00000457863 CHGAP10645 457 aaKnown RBP8.06□□□□□ -1.12
HMGB3P30-201ENST00000457863 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
HMGB3P30-201ENST00000457863 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
HMGB3P30-201ENST00000457863 PPP1R37O75864 691 aa8.05□□□□□ -1.12
HMGB3P30-201ENST00000457863 ERBB3P21860 1342 aa8.03□□□□□ -1.12
HMGB3P30-201ENST00000457863 TMC2Q8TDI7 906 aa8.03□□□□□ -1.12
HMGB3P30-201ENST00000457863 SLC34A2O95436 690 aa8.02□□□□□ -1.13
HMGB3P30-201ENST00000457863 NKX1-1Q15270 411 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P30-201ENST00000457863 SPNS2Q8IVW8 549 aa8.02□□□□□ -1.13
HMGB3P30-201ENST00000457863 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
HMGB3P30-201ENST00000457863 VARS2Q5ST30 1063 aaKnown RBP8□□□□□ -1.13
HMGB3P30-201ENST00000457863 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
HMGB3P30-201ENST00000457863 ARSIQ5FYB1 569 aa7.99□□□□□ -1.13
HMGB3P30-201ENST00000457863 ZNF687Q8N1G0 1237 aa7.97□□□□□ -1.13
HMGB3P30-201ENST00000457863 FOXK1P85037 733 aa7.96□□□□□ -1.14
HMGB3P30-201ENST00000457863 RTN4Q9NQC3 1192 aaKnown RBP7.96□□□□□ -1.14
HMGB3P30-201ENST00000457863 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P30-201ENST00000457863 KHSRPQ92945 711 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGB3P30-201ENST00000457863 GPHNQ9NQX3 736 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P30-201ENST00000457863 PCDHGA4Q9Y5G9 962 aa7.95□□□□□ -1.14
HMGB3P30-201ENST00000457863 NUDT7P0C024 238 aa7.92□□□□□ -1.14
HMGB3P30-201ENST00000457863 AMER1Q5JTC6 1135 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P30-201ENST00000457863 PTCD2Q8WV60 388 aaKnown RBP7.92□□□□□ -1.14
HMGB3P30-201ENST00000457863 DSG2Q14126 1118 aa7.91□□□□□ -1.14
HMGB3P30-201ENST00000457863 CRISPLD2Q9H0B8 497 aa7.91□□□□□ -1.14
HMGB3P30-201ENST00000457863 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.14
HMGB3P30-201ENST00000457863 GTPBP6O43824 516 aaPredicted RBP7.9□□□□□ -1.14
HMGB3P30-201ENST00000457863 PLPP6Q8IY26 295 aa7.9□□□□□ -1.14
HMGB3P30-201ENST00000457863 PBX2P40425 430 aa7.88□□□□□ -1.15
HMGB3P30-201ENST00000457863 LHX6Q9UPM6 363 aa7.88□□□□□ -1.15
HMGB3P30-201ENST00000457863 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P30-201ENST00000457863 DCAF8L2P0C7V8 631 aa7.86□□□□□ -1.15
HMGB3P30-201ENST00000457863 PTGER2P43116 358 aa7.86□□□□□ -1.15
HMGB3P30-201ENST00000457863 NCKAP5LQ9HCH0 1330 aa7.85□□□□□ -1.15
HMGB3P30-201ENST00000457863 LSM11P83369 360 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGB3P30-201ENST00000457863 PPP1R15BQ5SWA1 713 aa7.84□□□□□ -1.15
HMGB3P30-201ENST00000457863 OXER1Q8TDS5 423 aa7.84□□□□□ -1.15
HMGB3P30-201ENST00000457863 TBC1D12O60347 775 aa7.83□□□□□ -1.16
HMGB3P30-201ENST00000457863 PDE4AP27815 886 aa7.82□□□□□ -1.16
HMGB3P30-201ENST00000457863 POTEEQ6S8J3 1075 aa7.82□□□□□ -1.16
HMGB3P30-201ENST00000457863 MFSD10Q14728 455 aa7.81□□□□□ -1.16
HMGB3P30-201ENST00000457863 RNF166Q96A37 237 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P30-201ENST00000457863 MYT1LQ9UL68 1186 aa7.81□□□□□ -1.16
HMGB3P30-201ENST00000457863 PPP4R3BQ5MIZ7 849 aa7.78□□□□□ -1.16
HMGB3P30-201ENST00000457863 ANKRD13DQ6ZTN6 518 aa7.78□□□□□ -1.16
HMGB3P30-201ENST00000457863 DDX27Q96GQ7 796 aaKnown RBP7.78□□□□□ -1.16
HMGB3P30-201ENST00000457863 ARHGAP33O14559 1287 aa7.77□□□□□ -1.17
HMGB3P30-201ENST00000457863 UPF1Q92900 1129 aaKnown RBP eCLIP7.77□□□□□ -1.17
HMGB3P30-201ENST00000457863 AXIN2Q9Y2T1 843 aa7.77□□□□□ -1.17
HMGB3P30-201ENST00000457863 BBXQ8WY36 941 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P30-201ENST00000457863 LARP6Q9BRS8 491 aaKnown RBP7.76□□□□□ -1.17
HMGB3P30-201ENST00000457863 TK2O00142 265 aa7.74□□□□□ -1.17
HMGB3P30-201ENST00000457863 CADPS2Q86UW7 1296 aa7.74□□□□□ -1.17
HMGB3P30-201ENST00000457863 ADGRD1Q6QNK2 874 aa7.73□□□□□ -1.17
HMGB3P30-201ENST00000457863 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P30-201ENST00000457863 FOSBP53539 338 aa7.71□□□□□ -1.18
HMGB3P30-201ENST00000457863 JPH4Q96JJ6 628 aa7.71□□□□□ -1.18
HMGB3P30-201ENST00000457863 BCL2L12Q9HB09 334 aa7.71□□□□□ -1.18
HMGB3P30-201ENST00000457863 DAXXQ9UER7 740 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P30-201ENST00000457863 EVI5O60447 810 aa7.7□□□□□ -1.18
HMGB3P30-201ENST00000457863 PSEN2P49810 448 aa7.7□□□□□ -1.18
HMGB3P30-201ENST00000457863 DMRTA1Q5VZB9 504 aa7.7□□□□□ -1.18
HMGB3P30-201ENST00000457863 ZNF454Q8N9F8 522 aa7.7□□□□□ -1.18
HMGB3P30-201ENST00000457863 EMILIN3Q9NT22 766 aa7.7□□□□□ -1.18
HMGB3P30-201ENST00000457863 HRO43593 1189 aa7.69□□□□□ -1.18
HMGB3P30-201ENST00000457863 CAMK2BQ13554 666 aa7.69□□□□□ -1.18
HMGB3P30-201ENST00000457863 KCNH8Q96L42 1107 aa7.69□□□□□ -1.18
HMGB3P30-201ENST00000457863 KCNK17Q96T54 332 aa7.68□□□□□ -1.18
HMGB3P30-201ENST00000457863 MAP3K9P80192 1104 aa7.66□□□□□ -1.18
HMGB3P30-201ENST00000457863 SLC4A5Q9BY07 1137 aa7.66□□□□□ -1.18
HMGB3P30-201ENST00000457863 SPRYD3Q8NCJ5 442 aa7.65□□□□□ -1.18
HMGB3P30-201ENST00000457863 ZDHHC16Q969W1 377 aa7.65□□□□□ -1.18
HMGB3P30-201ENST00000457863 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P30-201ENST00000457863 PTPREP23469 700 aa7.64□□□□□ -1.19
HMGB3P30-201ENST00000457863 ADAM33Q9BZ11 813 aa7.63□□□□□ -1.19
HMGB3P30-201ENST00000457863 VPS9D1Q9Y2B5 631 aa7.63□□□□□ -1.19
HMGB3P30-201ENST00000457863 ZBED2Q9BTP6 218 aa7.62□□□□□ -1.19
HMGB3P30-201ENST00000457863 PHF14O94880 888 aa7.61□□□□□ -1.19
HMGB3P30-201ENST00000457863 FBXW7Q969H0 707 aa7.61□□□□□ -1.19
HMGB3P30-201ENST00000457863 HCSTQ9UBK5 93 aa7.61□□□□□ -1.19
HMGB3P30-201ENST00000457863 PCDHGA10Q9Y5H3 936 aa7.61□□□□□ -1.19
HMGB3P30-201ENST00000457863 PPP1R3GB7ZBB8 358 aa7.59□□□□□ -1.19
HMGB3P30-201ENST00000457863 DPYSL4O14531 572 aa7.59□□□□□ -1.19
HMGB3P30-201ENST00000457863 TYW1BQ6NUM6 668 aa7.59□□□□□ -1.19
HMGB3P30-201ENST00000457863 BHMG1C9JSJ3 638 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P30-201ENST00000457863 PDIA6Q15084 440 aa7.57□□□□□ -1.2
HMGB3P30-201ENST00000457863 EPAS1Q99814 870 aa7.57□□□□□ -1.2
HMGB3P30-201ENST00000457863 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P30-201ENST00000457863 ARIH1Q9Y4X5 557 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms