RNA–Protein interactions for RNA: ENST00000457525.5

VSNL1-205, Transcript of visinin like 1, humanhuman

TSL 3

Gene VSNL1, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-205ENST00000457525 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
VSNL1-205ENST00000457525 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
VSNL1-205ENST00000457525 MAP3K13O43283 966 aa12.35□□□□□ -0.43
VSNL1-205ENST00000457525 GPR37O15354 613 aa12.33□□□□□ -0.44
VSNL1-205ENST00000457525 FAM117AQ9C073 453 aa12.33□□□□□ -0.44
VSNL1-205ENST00000457525 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
VSNL1-205ENST00000457525 FLIIQ13045 1269 aa12.31□□□□□ -0.44
VSNL1-205ENST00000457525 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
VSNL1-205ENST00000457525 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
VSNL1-205ENST00000457525 PDIA6Q15084 440 aa12.3□□□□□ -0.44
VSNL1-205ENST00000457525 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
VSNL1-205ENST00000457525 PPP1R15BQ5SWA1 713 aa12.29□□□□□ -0.44
VSNL1-205ENST00000457525 ARID3AQ99856 593 aa12.29□□□□□ -0.44
VSNL1-205ENST00000457525 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
VSNL1-205ENST00000457525 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
VSNL1-205ENST00000457525 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
VSNL1-205ENST00000457525 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
VSNL1-205ENST00000457525 APBB1O00213 710 aa12.24□□□□□ -0.45
VSNL1-205ENST00000457525 DPYSL4O14531 572 aa12.24□□□□□ -0.45
VSNL1-205ENST00000457525 AMHR2Q16671 573 aa12.24□□□□□ -0.45
VSNL1-205ENST00000457525 GOPCQ9HD26 462 aa12.24□□□□□ -0.45
VSNL1-205ENST00000457525 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
VSNL1-205ENST00000457525 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
VSNL1-205ENST00000457525 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
VSNL1-205ENST00000457525 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
VSNL1-205ENST00000457525 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
VSNL1-205ENST00000457525 A6NJR5 290 aa12.19□□□□□ -0.46
VSNL1-205ENST00000457525 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
VSNL1-205ENST00000457525 IRF6O14896 467 aa12.18□□□□□ -0.46
VSNL1-205ENST00000457525 PARP9Q8IXQ6 854 aa12.18□□□□□ -0.46
VSNL1-205ENST00000457525 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
VSNL1-205ENST00000457525 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
VSNL1-205ENST00000457525 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
VSNL1-205ENST00000457525 DSG2Q14126 1118 aa12.12□□□□□ -0.47
VSNL1-205ENST00000457525 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
VSNL1-205ENST00000457525 TRAK2O60296 914 aa12.11□□□□□ -0.47
VSNL1-205ENST00000457525 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
VSNL1-205ENST00000457525 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
VSNL1-205ENST00000457525 GNPATO15228 680 aa12.1□□□□□ -0.47
VSNL1-205ENST00000457525 FOXK1P85037 733 aa12.09□□□□□ -0.47
VSNL1-205ENST00000457525 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
VSNL1-205ENST00000457525 CCDC82Q8N4S0 544 aa12.08□□□□□ -0.48
VSNL1-205ENST00000457525 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
VSNL1-205ENST00000457525 HIC1Q14526 733 aa12.07□□□□□ -0.48
VSNL1-205ENST00000457525 CLUAP1Q96AJ1 413 aa12.05□□□□□ -0.48
VSNL1-205ENST00000457525 FCHSD2O94868 740 aa12.04□□□□□ -0.48
VSNL1-205ENST00000457525 OSBPP22059 807 aa12.04□□□□□ -0.48
VSNL1-205ENST00000457525 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
VSNL1-205ENST00000457525 PCMTD1Q96MG8 357 aaPredicted RBP12.04□□□□□ -0.48
VSNL1-205ENST00000457525 GRXCR2A6NFK2 248 aa12.02□□□□□ -0.49
VSNL1-205ENST00000457525 MCM6Q14566 821 aa12.02□□□□□ -0.49
VSNL1-205ENST00000457525 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
VSNL1-205ENST00000457525 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
VSNL1-205ENST00000457525 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
VSNL1-205ENST00000457525 FECHP22830 423 aa12□□□□□ -0.49
VSNL1-205ENST00000457525 PTGER2P43116 358 aa12□□□□□ -0.49
VSNL1-205ENST00000457525 TMC2Q8TDI7 906 aa12□□□□□ -0.49
VSNL1-205ENST00000457525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.492e-6■□□□□ 9.8
VSNL1-205ENST00000457525 MS4A1P11836 297 aa11.99□□□□□ -0.49
VSNL1-205ENST00000457525 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
VSNL1-205ENST00000457525 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
VSNL1-205ENST00000457525 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
VSNL1-205ENST00000457525 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
VSNL1-205ENST00000457525 MICALL2Q8IY33 904 aa11.97□□□□□ -0.49
VSNL1-205ENST00000457525 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
VSNL1-205ENST00000457525 MAP3K9P80192 1104 aa11.95□□□□□ -0.5
VSNL1-205ENST00000457525 PROSER2Q86WR7 435 aaPredicted RBP11.94□□□□□ -0.5
VSNL1-205ENST00000457525 FNBP4Q8N3X1 1017 aaPredicted RBP11.94□□□□□ -0.5
VSNL1-205ENST00000457525 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
VSNL1-205ENST00000457525 KIF3CO14782 793 aa11.93□□□□□ -0.5
VSNL1-205ENST00000457525 TIE1P35590 1138 aa11.93□□□□□ -0.5
VSNL1-205ENST00000457525 PTGDRQ13258 359 aa11.93□□□□□ -0.5
VSNL1-205ENST00000457525 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
VSNL1-205ENST00000457525 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
VSNL1-205ENST00000457525 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
VSNL1-205ENST00000457525 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
VSNL1-205ENST00000457525 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
VSNL1-205ENST00000457525 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
VSNL1-205ENST00000457525 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
VSNL1-205ENST00000457525 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
VSNL1-205ENST00000457525 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
VSNL1-205ENST00000457525 TMEM121BQ9BXQ6 578 aaPredicted RBP11.88□□□□□ -0.51
VSNL1-205ENST00000457525 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
VSNL1-205ENST00000457525 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
VSNL1-205ENST00000457525 CLCN1P35523 988 aa11.86□□□□□ -0.51
VSNL1-205ENST00000457525 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
VSNL1-205ENST00000457525 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
VSNL1-205ENST00000457525 DDX12PQ92771 950 aa11.85□□□□□ -0.51
VSNL1-205ENST00000457525 CCDC97Q96F63 343 aaPredicted RBP11.85□□□□□ -0.51
VSNL1-205ENST00000457525 RAD21O60216 631 aa11.83□□□□□ -0.52
VSNL1-205ENST00000457525 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
VSNL1-205ENST00000457525 POM121Q96HA1 1249 aa11.83□□□□□ -0.52
VSNL1-205ENST00000457525 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
VSNL1-205ENST00000457525 SPDYE5A6NIY4 337 aa11.8□□□□□ -0.52
VSNL1-205ENST00000457525 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
VSNL1-205ENST00000457525 BMP2KQ9NSY1 1161 aaPredicted RBP11.8□□□□□ -0.52
VSNL1-205ENST00000457525 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
VSNL1-205ENST00000457525 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
VSNL1-205ENST00000457525 SSTR3P32745 418 aaPredicted RBP11.78□□□□□ -0.52
VSNL1-205ENST00000457525 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms