RNA–Protein interactions for RNA: ENST00000457232.5

HNF4A-206, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-206ENST00000457232 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
HNF4A-206ENST00000457232 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
HNF4A-206ENST00000457232 MAGI2Q86UL8 1455 aa20.98■□□□□ 0.95
HNF4A-206ENST00000457232 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
HNF4A-206ENST00000457232 CDC42BPBQ9Y5S2 1711 aa20.97■□□□□ 0.95
HNF4A-206ENST00000457232 CASKIN1Q8WXD9 1431 aa20.96■□□□□ 0.95
HNF4A-206ENST00000457232 CDK11AQ9UQ88 783 aaPredicted RBP20.94■□□□□ 0.94
HNF4A-206ENST00000457232 ARID4BQ4LE39 1312 aaPredicted RBP20.94■□□□□ 0.94
HNF4A-206ENST00000457232 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
HNF4A-206ENST00000457232 CCDC18Q5T9S5 1454 aa20.93■□□□□ 0.94
HNF4A-206ENST00000457232 CLIP1P30622 1438 aa20.92■□□□□ 0.94
HNF4A-206ENST00000457232 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
HNF4A-206ENST00000457232 KDM5CP41229 1560 aa20.91■□□□□ 0.94
HNF4A-206ENST00000457232 FER1L4A9Z1Z3 1794 aa20.9■□□□□ 0.94
HNF4A-206ENST00000457232 FYCO1Q9BQS8 1478 aa20.89■□□□□ 0.94
HNF4A-206ENST00000457232 EFCAB2Q5VUJ9 269 aa20.89■□□□□ 0.93
HNF4A-206ENST00000457232 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
HNF4A-206ENST00000457232 ZNF518AQ6AHZ1 1483 aa20.87■□□□□ 0.93
HNF4A-206ENST00000457232 LMTK3Q96Q04 1460 aa20.87■□□□□ 0.93
HNF4A-206ENST00000457232 ITSN2Q9NZM3 1697 aa20.85■□□□□ 0.93
HNF4A-206ENST00000457232 ABCC1P33527 1531 aa20.85■□□□□ 0.93
HNF4A-206ENST00000457232 ATP10AO60312 1499 aa20.85■□□□□ 0.93
HNF4A-206ENST00000457232 C9orf84Q5VXU9 1444 aa20.84■□□□□ 0.93
HNF4A-206ENST00000457232 DIP2CQ9Y2E4 1556 aa20.84■□□□□ 0.93
HNF4A-206ENST00000457232 ARHGEF12Q9NZN5 1544 aa20.84■□□□□ 0.93
HNF4A-206ENST00000457232 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.93
HNF4A-206ENST00000457232 ABCA6Q8N139 1617 aa20.82■□□□□ 0.92
HNF4A-206ENST00000457232 REREQ9P2R6 1566 aa20.8■□□□□ 0.92
HNF4A-206ENST00000457232 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
HNF4A-206ENST00000457232 MLH3Q9UHC1 1453 aa20.77■□□□□ 0.92
HNF4A-206ENST00000457232 TRAPPC8Q9Y2L5 1435 aa20.77■□□□□ 0.91
HNF4A-206ENST00000457232 MLECQ14165 292 aa20.77■□□□□ 0.91
HNF4A-206ENST00000457232 KIDINS220Q9ULH0 1771 aa20.76■□□□□ 0.91
HNF4A-206ENST00000457232 SAMD9LQ8IVG5 1584 aa20.76■□□□□ 0.91
HNF4A-206ENST00000457232 GPATCH8Q9UKJ3 1502 aaKnown RBP20.72■□□□□ 0.91
HNF4A-206ENST00000457232 PREX1Q8TCU6 1659 aa20.71■□□□□ 0.91
HNF4A-206ENST00000457232 AGLP35573 1532 aa20.7■□□□□ 0.9
HNF4A-206ENST00000457232 SYCP2Q9BX26 1530 aa20.7■□□□□ 0.9
HNF4A-206ENST00000457232 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
HNF4A-206ENST00000457232 C3P01024 1663 aa20.66■□□□□ 0.9
HNF4A-206ENST00000457232 HSPA2P54652 639 aa20.66■□□□□ 0.9
HNF4A-206ENST00000457232 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
HNF4A-206ENST00000457232 INO80Q9ULG1 1556 aaPredicted RBP20.64■□□□□ 0.9
HNF4A-206ENST00000457232 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
HNF4A-206ENST00000457232 MYT1LQ9UL68 1186 aa20.63■□□□□ 0.89
HNF4A-206ENST00000457232 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
HNF4A-206ENST00000457232 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
HNF4A-206ENST00000457232 ATP7AQ04656 1500 aa20.6■□□□□ 0.89
HNF4A-206ENST00000457232 KIAA1107Q9UPP5 1409 aa20.6■□□□□ 0.89
HNF4A-206ENST00000457232 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
HNF4A-206ENST00000457232 ZNF777Q9ULD5 760 aaPredicted RBP20.6■□□□□ 0.89
HNF4A-206ENST00000457232 SUPT6HQ7KZ85 1726 aaKnown RBP20.59■□□□□ 0.89
HNF4A-206ENST00000457232 PLXNC1O60486 1568 aa20.59■□□□□ 0.89
HNF4A-206ENST00000457232 SETD1BQ9UPS6 1966 aaKnown RBP20.59■□□□□ 0.89
HNF4A-206ENST00000457232 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
HNF4A-206ENST00000457232 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.89
HNF4A-206ENST00000457232 STRCQ7RTU9 1775 aa20.58■□□□□ 0.88
HNF4A-206ENST00000457232 MROH2AA6NES4 1674 aa20.57■□□□□ 0.88
HNF4A-206ENST00000457232 HNRNPMP52272 730 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■■□ 20.4
HNF4A-206ENST00000457232 CFDP1Q9UEE9 299 aaPredicted RBP20.55■□□□□ 0.88
HNF4A-206ENST00000457232 SPAG9O60271 1321 aaKnown RBP20.54■□□□□ 0.88
HNF4A-206ENST00000457232 FBXO41Q8TF61 875 aa20.53■□□□□ 0.88
HNF4A-206ENST00000457232 ADGBQ8N7X0 1667 aa20.53■□□□□ 0.88
HNF4A-206ENST00000457232 UHRF1BP1Q6BDS2 1440 aa20.53■□□□□ 0.88
HNF4A-206ENST00000457232 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
HNF4A-206ENST00000457232 CNTLNQ9NXG0 1405 aa20.51■□□□□ 0.87
HNF4A-206ENST00000457232 A2MP01023 1474 aa20.5■□□□□ 0.87
HNF4A-206ENST00000457232 CLTCQ00610 1675 aaKnown RBP20.49■□□□□ 0.87
HNF4A-206ENST00000457232 ZNF644Q9H582 1327 aaPredicted RBP20.49■□□□□ 0.87
HNF4A-206ENST00000457232 NCOA2Q15596 1464 aa20.48■□□□□ 0.87
HNF4A-206ENST00000457232 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
HNF4A-206ENST00000457232 CAMSAP2Q08AD1 1489 aa20.44■□□□□ 0.86
HNF4A-206ENST00000457232 NPATQ14207 1427 aa20.43■□□□□ 0.86
HNF4A-206ENST00000457232 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
HNF4A-206ENST00000457232 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
HNF4A-206ENST00000457232 ZNF142P52746 1687 aaPredicted RBP20.41■□□□□ 0.86
HNF4A-206ENST00000457232 MYO3AQ8NEV4 1616 aa20.41■□□□□ 0.86
HNF4A-206ENST00000457232 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
HNF4A-206ENST00000457232 CCDC141Q6ZP82 1450 aa20.4■□□□□ 0.86
HNF4A-206ENST00000457232 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
HNF4A-206ENST00000457232 LRRC9Q6ZRR7 1453 aa20.39■□□□□ 0.85
HNF4A-206ENST00000457232 ARHGEF5Q12774 1597 aa20.39■□□□□ 0.85
HNF4A-206ENST00000457232 CERKQ8TCT0 537 aa20.37■□□□□ 0.85
HNF4A-206ENST00000457232 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
HNF4A-206ENST00000457232 PTPRTO14522 1441 aa20.36■□□□□ 0.85
HNF4A-206ENST00000457232 PTPRKQ15262 1439 aa20.36■□□□□ 0.85
HNF4A-206ENST00000457232 CAMSAP1Q5T5Y3 1602 aa20.36■□□□□ 0.85
HNF4A-206ENST00000457232 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
HNF4A-206ENST00000457232 DHX29Q7Z478 1369 aaKnown RBP20.34■□□□□ 0.85
HNF4A-206ENST00000457232 GGT6Q6P531 493 aa20.33■□□□□ 0.85
HNF4A-206ENST00000457232 DMRT2Q9Y5R5 561 aa20.33■□□□□ 0.85
HNF4A-206ENST00000457232 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.85
HNF4A-206ENST00000457232 LTBP4Q8N2S1 1624 aa20.3■□□□□ 0.84
HNF4A-206ENST00000457232 MAST1Q9Y2H9 1570 aa20.3■□□□□ 0.84
HNF4A-206ENST00000457232 FAM135AQ9P2D6 1515 aa20.3■□□□□ 0.84
HNF4A-206ENST00000457232 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
HNF4A-206ENST00000457232 KDM5DQ9BY66 1539 aa20.28■□□□□ 0.84
HNF4A-206ENST00000457232 KANK4Q5T7N3 995 aaPredicted RBP20.27■□□□□ 0.84
HNF4A-206ENST00000457232 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.84
HNF4A-206ENST00000457232 PLA2R1Q13018 1463 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms