RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
VEGFA-210ENST00000457104 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
VEGFA-210ENST00000457104 SIGLEC1Q9BZZ2 1709 aa20.06■□□□□ 0.8
VEGFA-210ENST00000457104 POGZQ7Z3K3 1410 aa20.05■□□□□ 0.8
VEGFA-210ENST00000457104 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
VEGFA-210ENST00000457104 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
VEGFA-210ENST00000457104 ARHGAP5Q13017 1502 aa20.04■□□□□ 0.8
VEGFA-210ENST00000457104 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
VEGFA-210ENST00000457104 ZFYVE16Q7Z3T8 1539 aa20.03■□□□□ 0.8
VEGFA-210ENST00000457104 MAGI2Q86UL8 1455 aa20.03■□□□□ 0.8
VEGFA-210ENST00000457104 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
VEGFA-210ENST00000457104 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
VEGFA-210ENST00000457104 KDM5CP41229 1560 aa19.98■□□□□ 0.79
VEGFA-210ENST00000457104 HECW2Q9P2P5 1572 aa19.98■□□□□ 0.79
VEGFA-210ENST00000457104 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
VEGFA-210ENST00000457104 PTPRMP28827 1452 aa19.97■□□□□ 0.79
VEGFA-210ENST00000457104 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
VEGFA-210ENST00000457104 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
VEGFA-210ENST00000457104 ABCC1P33527 1531 aa19.95■□□□□ 0.78
VEGFA-210ENST00000457104 ARHGEF12Q9NZN5 1544 aa19.95■□□□□ 0.78
VEGFA-210ENST00000457104 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
VEGFA-210ENST00000457104 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
VEGFA-210ENST00000457104 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
VEGFA-210ENST00000457104 ATP10AO60312 1499 aa19.92■□□□□ 0.78
VEGFA-210ENST00000457104 GPATCH8Q9UKJ3 1502 aaKnown RBP19.92■□□□□ 0.78
VEGFA-210ENST00000457104 TRAPPC8Q9Y2L5 1435 aa19.9■□□□□ 0.78
VEGFA-210ENST00000457104 SAMD9LQ8IVG5 1584 aa19.9■□□□□ 0.78
VEGFA-210ENST00000457104 C9orf84Q5VXU9 1444 aa19.89■□□□□ 0.77
VEGFA-210ENST00000457104 FER1L4A9Z1Z3 1794 aa19.88■□□□□ 0.77
VEGFA-210ENST00000457104 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
VEGFA-210ENST00000457104 DIP2CQ9Y2E4 1556 aa19.88■□□□□ 0.77
VEGFA-210ENST00000457104 MLH3Q9UHC1 1453 aa19.87■□□□□ 0.77
VEGFA-210ENST00000457104 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
VEGFA-210ENST00000457104 KIDINS220Q9ULH0 1771 aa19.87■□□□□ 0.77
VEGFA-210ENST00000457104 EHBP1L1Q8N3D4 1523 aa19.85■□□□□ 0.77
VEGFA-210ENST00000457104 REREQ9P2R6 1566 aa19.84■□□□□ 0.77
VEGFA-210ENST00000457104 TIAM1Q13009 1591 aa19.83■□□□□ 0.77
VEGFA-210ENST00000457104 SYCP2Q9BX26 1530 aa19.83■□□□□ 0.77
VEGFA-210ENST00000457104 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
VEGFA-210ENST00000457104 MLECQ14165 292 aa19.82■□□□□ 0.76
VEGFA-210ENST00000457104 ZNF777Q9ULD5 760 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-210ENST00000457104 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-210ENST00000457104 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
VEGFA-210ENST00000457104 HNRNPMP52272 730 aaKnown RBP eCLIP19.79■□□□□ 0.761e-12■■■■■ 34.3
VEGFA-210ENST00000457104 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
VEGFA-210ENST00000457104 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
VEGFA-210ENST00000457104 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
VEGFA-210ENST00000457104 PLEKHH2Q8IVE3 1493 aa19.77■□□□□ 0.76
VEGFA-210ENST00000457104 AGLP35573 1532 aa19.76■□□□□ 0.75
VEGFA-210ENST00000457104 LMTK3Q96Q04 1460 aa19.76■□□□□ 0.75
VEGFA-210ENST00000457104 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
VEGFA-210ENST00000457104 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
VEGFA-210ENST00000457104 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
VEGFA-210ENST00000457104 ATP7AQ04656 1500 aa19.73■□□□□ 0.75
VEGFA-210ENST00000457104 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
VEGFA-210ENST00000457104 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
VEGFA-210ENST00000457104 MBD5Q9P267 1494 aa19.71■□□□□ 0.75
VEGFA-210ENST00000457104 C3P01024 1663 aa19.69■□□□□ 0.74
VEGFA-210ENST00000457104 LRRC9Q6ZRR7 1453 aa19.69■□□□□ 0.74
VEGFA-210ENST00000457104 MAP3K1Q13233 1512 aa19.69■□□□□ 0.74
VEGFA-210ENST00000457104 PLXNC1O60486 1568 aa19.67■□□□□ 0.74
VEGFA-210ENST00000457104 SETD1BQ9UPS6 1966 aaKnown RBP19.67■□□□□ 0.74
VEGFA-210ENST00000457104 CEBPAP49715 358 aaPredicted RBP19.67■□□□□ 0.74
VEGFA-210ENST00000457104 PREX1Q8TCU6 1659 aa19.67■□□□□ 0.74
VEGFA-210ENST00000457104 ADGBQ8N7X0 1667 aa19.66■□□□□ 0.74
VEGFA-210ENST00000457104 KANK4Q5T7N3 995 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-210ENST00000457104 CAMSAP2Q08AD1 1489 aa19.64■□□□□ 0.73
VEGFA-210ENST00000457104 A2MP01023 1474 aa19.63■□□□□ 0.73
VEGFA-210ENST00000457104 HSPA2P54652 639 aa19.63■□□□□ 0.73
VEGFA-210ENST00000457104 MROH2AA6NES4 1674 aa19.61■□□□□ 0.73
VEGFA-210ENST00000457104 RTEL1-TNFRSF6BF6WH68 1400 aa19.6■□□□□ 0.73
VEGFA-210ENST00000457104 ARHGEF5Q12774 1597 aa19.59■□□□□ 0.73
VEGFA-210ENST00000457104 CCDC141Q6ZP82 1450 aa19.59■□□□□ 0.73
VEGFA-210ENST00000457104 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
VEGFA-210ENST00000457104 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
VEGFA-210ENST00000457104 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
VEGFA-210ENST00000457104 RSPH4AQ5TD94 716 aa19.55■□□□□ 0.72
VEGFA-210ENST00000457104 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-210ENST00000457104 STRCQ7RTU9 1775 aa19.54■□□□□ 0.72
VEGFA-210ENST00000457104 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
VEGFA-210ENST00000457104 DHX29Q7Z478 1369 aaKnown RBP19.53■□□□□ 0.72
VEGFA-210ENST00000457104 UHRF1BP1Q6BDS2 1440 aa19.52■□□□□ 0.72
VEGFA-210ENST00000457104 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
VEGFA-210ENST00000457104 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
VEGFA-210ENST00000457104 MAST1Q9Y2H9 1570 aa19.5■□□□□ 0.71
VEGFA-210ENST00000457104 GGT6Q6P531 493 aa19.5■□□□□ 0.71
VEGFA-210ENST00000457104 NPATQ14207 1427 aa19.49■□□□□ 0.71
VEGFA-210ENST00000457104 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
VEGFA-210ENST00000457104 TSPY4P0CV99 314 aa19.46■□□□□ 0.71
VEGFA-210ENST00000457104 TSPY10P0CW01 314 aa19.46■□□□□ 0.71
VEGFA-210ENST00000457104 APLP2Q06481 763 aa19.45■□□□□ 0.7
VEGFA-210ENST00000457104 PTPN23Q9H3S7 1636 aa19.44■□□□□ 0.7
VEGFA-210ENST00000457104 PTPRKQ15262 1439 aa19.44■□□□□ 0.7
VEGFA-210ENST00000457104 KIF3BO15066 747 aa19.44■□□□□ 0.7
VEGFA-210ENST00000457104 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
VEGFA-210ENST00000457104 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
VEGFA-210ENST00000457104 ZNF142P52746 1687 aaPredicted RBP19.42■□□□□ 0.7
VEGFA-210ENST00000457104 FAM135AQ9P2D6 1515 aa19.41■□□□□ 0.7
VEGFA-210ENST00000457104 RNF17Q9BXT8 1623 aaKnown RBP19.4■□□□□ 0.7
VEGFA-210ENST00000457104 KDM5DQ9BY66 1539 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms