RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CDC42BPAQ5VT25 1732 aa22.18■■□□□ 1.14
SMPD4-215ENST00000457039 CDC42BPBQ9Y5S2 1711 aa22.17■■□□□ 1.14
SMPD4-215ENST00000457039 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
SMPD4-215ENST00000457039 AKNAQ7Z591 1439 aa22.16■■□□□ 1.14
SMPD4-215ENST00000457039 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
SMPD4-215ENST00000457039 CCNB3Q8WWL7 1395 aa22.14■■□□□ 1.14
SMPD4-215ENST00000457039 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
SMPD4-215ENST00000457039 ITSN2Q9NZM3 1697 aa22.09■■□□□ 1.13
SMPD4-215ENST00000457039 ADGRL1O94910 1474 aa22.09■■□□□ 1.13
SMPD4-215ENST00000457039 CFDP1Q9UEE9 299 aaPredicted RBP22.06■■□□□ 1.12
SMPD4-215ENST00000457039 DENND4BO75064 1496 aaPredicted RBP22.06■■□□□ 1.12
SMPD4-215ENST00000457039 FRMPD1Q5SYB0 1578 aa22.06■■□□□ 1.12
SMPD4-215ENST00000457039 SAMD9LQ8IVG5 1584 aa22.06■■□□□ 1.12
SMPD4-215ENST00000457039 ABCC1P33527 1531 aa22.06■■□□□ 1.12
SMPD4-215ENST00000457039 SCAPERQ9BY12 1400 aa22.06■■□□□ 1.12
SMPD4-215ENST00000457039 RICTORQ6R327 1708 aa22.03■■□□□ 1.12
SMPD4-215ENST00000457039 ARHGEF12Q9NZN5 1544 aa22.03■■□□□ 1.12
SMPD4-215ENST00000457039 RAPGEF3O95398 923 aa22.03■■□□□ 1.12
SMPD4-215ENST00000457039 POGZQ7Z3K3 1410 aa22.03■■□□□ 1.12
SMPD4-215ENST00000457039 MYOM3Q5VTT5 1437 aa22.02■■□□□ 1.12
SMPD4-215ENST00000457039 KIAA1107Q9UPP5 1409 aa22■■□□□ 1.11
SMPD4-215ENST00000457039 ZNF777Q9ULD5 760 aaPredicted RBP22■■□□□ 1.11
SMPD4-215ENST00000457039 MIA2Q96PC5 1412 aa21.99■■□□□ 1.11
SMPD4-215ENST00000457039 PLEKHH2Q8IVE3 1493 aa21.99■■□□□ 1.11
SMPD4-215ENST00000457039 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
SMPD4-215ENST00000457039 ZMYM4Q5VZL5 1548 aa21.97■■□□□ 1.11
SMPD4-215ENST00000457039 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
SMPD4-215ENST00000457039 TRAPPC8Q9Y2L5 1435 aa21.97■■□□□ 1.11
SMPD4-215ENST00000457039 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
SMPD4-215ENST00000457039 CAMSAP2Q08AD1 1489 aa21.96■■□□□ 1.11
SMPD4-215ENST00000457039 KDM5CP41229 1560 aa21.95■■□□□ 1.11
SMPD4-215ENST00000457039 MBD5Q9P267 1494 aa21.95■■□□□ 1.1
SMPD4-215ENST00000457039 AFAP1Q8N556 730 aa21.93■■□□□ 1.1
SMPD4-215ENST00000457039 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
SMPD4-215ENST00000457039 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMPD4-215ENST00000457039 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
SMPD4-215ENST00000457039 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
SMPD4-215ENST00000457039 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
SMPD4-215ENST00000457039 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
SMPD4-215ENST00000457039 ARHGEF40Q8TER5 1519 aa21.88■■□□□ 1.09
SMPD4-215ENST00000457039 MLH3Q9UHC1 1453 aa21.88■■□□□ 1.09
SMPD4-215ENST00000457039 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
SMPD4-215ENST00000457039 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
SMPD4-215ENST00000457039 ZFYVE16Q7Z3T8 1539 aa21.86■■□□□ 1.09
SMPD4-215ENST00000457039 YEATS2Q9ULM3 1422 aa21.86■■□□□ 1.09
SMPD4-215ENST00000457039 CCDC141Q6ZP82 1450 aa21.85■■□□□ 1.09
SMPD4-215ENST00000457039 RSPH4AQ5TD94 716 aa21.83■■□□□ 1.09
SMPD4-215ENST00000457039 KIDINS220Q9ULH0 1771 aa21.82■■□□□ 1.08
SMPD4-215ENST00000457039 INO80Q9ULG1 1556 aaPredicted RBP21.82■■□□□ 1.08
SMPD4-215ENST00000457039 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
SMPD4-215ENST00000457039 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
SMPD4-215ENST00000457039 DIP2CQ9Y2E4 1556 aa21.79■■□□□ 1.08
SMPD4-215ENST00000457039 ATP7AQ04656 1500 aa21.79■■□□□ 1.08
SMPD4-215ENST00000457039 RTEL1-TNFRSF6BF6WH68 1400 aa21.78■■□□□ 1.08
SMPD4-215ENST00000457039 ATP10AO60312 1499 aa21.77■■□□□ 1.08
SMPD4-215ENST00000457039 ABCC5O15440 1437 aa21.77■■□□□ 1.08
SMPD4-215ENST00000457039 DNMT1P26358 1616 aaKnown RBP21.76■■□□□ 1.07
SMPD4-215ENST00000457039 MAST1Q9Y2H9 1570 aa21.75■■□□□ 1.07
SMPD4-215ENST00000457039 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
SMPD4-215ENST00000457039 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
SMPD4-215ENST00000457039 REREQ9P2R6 1566 aa21.74■■□□□ 1.07
SMPD4-215ENST00000457039 DAPK1P53355 1430 aa21.74■■□□□ 1.07
SMPD4-215ENST00000457039 SIGLEC1Q9BZZ2 1709 aa21.74■■□□□ 1.07
SMPD4-215ENST00000457039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
SMPD4-215ENST00000457039 SHANK2Q9UPX8 1470 aa21.73■■□□□ 1.07
SMPD4-215ENST00000457039 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
SMPD4-215ENST00000457039 CROCC2H7BZ55 1655 aa21.72■■□□□ 1.07
SMPD4-215ENST00000457039 TSPY4P0CV99 314 aa21.72■■□□□ 1.07
SMPD4-215ENST00000457039 TSPY10P0CW01 314 aa21.72■■□□□ 1.07
SMPD4-215ENST00000457039 FAM50AQ14320 339 aaKnown RBP21.72■■□□□ 1.07
SMPD4-215ENST00000457039 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
SMPD4-215ENST00000457039 AGLP35573 1532 aa21.67■■□□□ 1.06
SMPD4-215ENST00000457039 ADGBQ8N7X0 1667 aa21.66■■□□□ 1.06
SMPD4-215ENST00000457039 A2MP01023 1474 aa21.66■■□□□ 1.06
SMPD4-215ENST00000457039 PTPRKQ15262 1439 aa21.64■■□□□ 1.06
SMPD4-215ENST00000457039 ADGRL2O95490 1459 aa21.63■■□□□ 1.05
SMPD4-215ENST00000457039 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
SMPD4-215ENST00000457039 DHX29Q7Z478 1369 aaKnown RBP21.62■■□□□ 1.05
SMPD4-215ENST00000457039 ARID4BQ4LE39 1312 aaPredicted RBP21.62■■□□□ 1.05
SMPD4-215ENST00000457039 KDM4FA0A1W2PPD8 638 aa21.62■■□□□ 1.05
SMPD4-215ENST00000457039 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
SMPD4-215ENST00000457039 ADAMTSL3P82987 1691 aa21.6■■□□□ 1.05
SMPD4-215ENST00000457039 CHIC2Q9UKJ5 165 aa21.58■■□□□ 1.05
SMPD4-215ENST00000457039 ANKRD30AQ9BXX3 1397 aa21.58■■□□□ 1.04
SMPD4-215ENST00000457039 KIF15Q9NS87 1388 aa21.58■■□□□ 1.04
SMPD4-215ENST00000457039 DUOX2Q9NRD8 1548 aa21.56■■□□□ 1.04
SMPD4-215ENST00000457039 ROCK1Q13464 1354 aa21.55■■□□□ 1.04
SMPD4-215ENST00000457039 RRP7BPQ9NSQ0 103 aa21.54■■□□□ 1.04
SMPD4-215ENST00000457039 MLECQ14165 292 aa21.53■■□□□ 1.04
SMPD4-215ENST00000457039 MADDQ8WXG6 1647 aa21.52■■□□□ 1.04
SMPD4-215ENST00000457039 ITGAEP38570 1179 aa21.52■■□□□ 1.04
SMPD4-215ENST00000457039 EIF2AK4Q9P2K8 1649 aaKnown RBP21.51■■□□□ 1.03
SMPD4-215ENST00000457039 ERBINQ96RT1 1412 aa21.51■■□□□ 1.03
SMPD4-215ENST00000457039 KIF3BO15066 747 aa21.49■■□□□ 1.03
SMPD4-215ENST00000457039 FER1L4A9Z1Z3 1794 aa21.47■■□□□ 1.03
SMPD4-215ENST00000457039 RNF17Q9BXT8 1623 aaKnown RBP21.47■■□□□ 1.03
SMPD4-215ENST00000457039 GGT6Q6P531 493 aa21.45■■□□□ 1.02
SMPD4-215ENST00000457039 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
SMPD4-215ENST00000457039 MROH1Q8NDA8 1641 aa21.44■■□□□ 1.02
SMPD4-215ENST00000457039 RIMS1Q86UR5 1692 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms