RNA–Protein interactions for RNA: ENST00000456515.5

SEC22C-214, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-214ENST00000456515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
SEC22C-214ENST00000456515 EFCAB2Q5VUJ9 269 aa11.54□□□□□ -0.56
SEC22C-214ENST00000456515 LRRC9Q6ZRR7 1453 aa11.54□□□□□ -0.56
SEC22C-214ENST00000456515 SUPT6HQ7KZ85 1726 aaKnown RBP11.54□□□□□ -0.56
SEC22C-214ENST00000456515 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
SEC22C-214ENST00000456515 NEO1Q92859 1461 aa11.53□□□□□ -0.56
SEC22C-214ENST00000456515 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
SEC22C-214ENST00000456515 TTC37Q6PGP7 1564 aa11.52□□□□□ -0.57
SEC22C-214ENST00000456515 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
SEC22C-214ENST00000456515 PLCH2O75038 1416 aa11.52□□□□□ -0.57
SEC22C-214ENST00000456515 KANK4Q5T7N3 995 aaPredicted RBP11.5□□□□□ -0.57
SEC22C-214ENST00000456515 CFDP1Q9UEE9 299 aaPredicted RBP11.5□□□□□ -0.57
SEC22C-214ENST00000456515 FANCAO15360 1455 aa11.5□□□□□ -0.57
SEC22C-214ENST00000456515 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
SEC22C-214ENST00000456515 AKNAQ7Z591 1439 aa11.49□□□□□ -0.57
SEC22C-214ENST00000456515 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
SEC22C-214ENST00000456515 ITSN2Q9NZM3 1697 aa11.48□□□□□ -0.57
SEC22C-214ENST00000456515 PREX2Q70Z35 1606 aa11.47□□□□□ -0.57
SEC22C-214ENST00000456515 GPATCH8Q9UKJ3 1502 aaKnown RBP11.47□□□□□ -0.57
SEC22C-214ENST00000456515 CDC42BPAQ5VT25 1732 aa11.46□□□□□ -0.57
SEC22C-214ENST00000456515 DENND4BO75064 1496 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-214ENST00000456515 ARID4BQ4LE39 1312 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-214ENST00000456515 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.57
SEC22C-214ENST00000456515 PLEKHH2Q8IVE3 1493 aa11.45□□□□□ -0.58
SEC22C-214ENST00000456515 CDC42BPBQ9Y5S2 1711 aa11.45□□□□□ -0.58
SEC22C-214ENST00000456515 FRMPD1Q5SYB0 1578 aa11.44□□□□□ -0.58
SEC22C-214ENST00000456515 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
SEC22C-214ENST00000456515 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
SEC22C-214ENST00000456515 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
SEC22C-214ENST00000456515 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
SEC22C-214ENST00000456515 ADAMTSL3P82987 1691 aa11.41□□□□□ -0.58
SEC22C-214ENST00000456515 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
SEC22C-214ENST00000456515 MYT1LQ9UL68 1186 aa11.41□□□□□ -0.58
SEC22C-214ENST00000456515 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
SEC22C-214ENST00000456515 KIAA1107Q9UPP5 1409 aa11.4□□□□□ -0.58
SEC22C-214ENST00000456515 AFAP1Q8N556 730 aa11.39□□□□□ -0.59
SEC22C-214ENST00000456515 PTPRMP28827 1452 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 MAGI2Q86UL8 1455 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 HECW2Q9P2P5 1572 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 ABCC1P33527 1531 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
SEC22C-214ENST00000456515 SAMD9LQ8IVG5 1584 aa11.37□□□□□ -0.59
SEC22C-214ENST00000456515 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
SEC22C-214ENST00000456515 POGZQ7Z3K3 1410 aa11.37□□□□□ -0.59
SEC22C-214ENST00000456515 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
SEC22C-214ENST00000456515 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
SEC22C-214ENST00000456515 HNRNPMP52272 730 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEC22C-214ENST00000456515 CAMSAP2Q08AD1 1489 aa11.37□□□□□ -0.59
SEC22C-214ENST00000456515 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
SEC22C-214ENST00000456515 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
SEC22C-214ENST00000456515 SYCP2Q9BX26 1530 aa11.35□□□□□ -0.59
SEC22C-214ENST00000456515 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
SEC22C-214ENST00000456515 ATP10AO60312 1499 aa11.35□□□□□ -0.59
SEC22C-214ENST00000456515 PTPN23Q9H3S7 1636 aa11.35□□□□□ -0.59
SEC22C-214ENST00000456515 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
SEC22C-214ENST00000456515 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
SEC22C-214ENST00000456515 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
SEC22C-214ENST00000456515 MLECQ14165 292 aa11.34□□□□□ -0.59
SEC22C-214ENST00000456515 CCDC141Q6ZP82 1450 aa11.33□□□□□ -0.6
SEC22C-214ENST00000456515 MADDQ8WXG6 1647 aa11.33□□□□□ -0.6
SEC22C-214ENST00000456515 TRAPPC8Q9Y2L5 1435 aa11.33□□□□□ -0.6
SEC22C-214ENST00000456515 SIGLEC1Q9BZZ2 1709 aa11.32□□□□□ -0.6
SEC22C-214ENST00000456515 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
SEC22C-214ENST00000456515 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
SEC22C-214ENST00000456515 ARHGEF5Q12774 1597 aa11.32□□□□□ -0.6
SEC22C-214ENST00000456515 TCOF1Q13428 1488 aaKnown RBP11.32□□□□□ -0.6
SEC22C-214ENST00000456515 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
SEC22C-214ENST00000456515 KDM5CP41229 1560 aa11.31□□□□□ -0.6
SEC22C-214ENST00000456515 MBD5Q9P267 1494 aa11.31□□□□□ -0.6
SEC22C-214ENST00000456515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC22C-214ENST00000456515 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
SEC22C-214ENST00000456515 RTEL1-TNFRSF6BF6WH68 1400 aa11.29□□□□□ -0.6
SEC22C-214ENST00000456515 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
SEC22C-214ENST00000456515 CEBPAP49715 358 aaPredicted RBP11.28□□□□□ -0.6
SEC22C-214ENST00000456515 ATP7AQ04656 1500 aa11.27□□□□□ -0.61
SEC22C-214ENST00000456515 HSPA2P54652 639 aa11.27□□□□□ -0.61
SEC22C-214ENST00000456515 DAPK1P53355 1430 aa11.26□□□□□ -0.61
SEC22C-214ENST00000456515 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
SEC22C-214ENST00000456515 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
SEC22C-214ENST00000456515 DNMT1P26358 1616 aaKnown RBP11.26□□□□□ -0.61
SEC22C-214ENST00000456515 SETD1BQ9UPS6 1966 aaKnown RBP11.26□□□□□ -0.61
SEC22C-214ENST00000456515 ABCC5O15440 1437 aa11.26□□□□□ -0.61
SEC22C-214ENST00000456515 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
SEC22C-214ENST00000456515 INO80Q9ULG1 1556 aaPredicted RBP11.25□□□□□ -0.61
SEC22C-214ENST00000456515 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
SEC22C-214ENST00000456515 ITGAEP38570 1179 aa11.25□□□□□ -0.61
SEC22C-214ENST00000456515 KIDINS220Q9ULH0 1771 aa11.25□□□□□ -0.61
SEC22C-214ENST00000456515 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
SEC22C-214ENST00000456515 FER1L4A9Z1Z3 1794 aa11.24□□□□□ -0.61
SEC22C-214ENST00000456515 CROCC2H7BZ55 1655 aa11.24□□□□□ -0.61
SEC22C-214ENST00000456515 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
SEC22C-214ENST00000456515 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
SEC22C-214ENST00000456515 DIP2CQ9Y2E4 1556 aa11.23□□□□□ -0.61
SEC22C-214ENST00000456515 A2MP01023 1474 aa11.22□□□□□ -0.61
SEC22C-214ENST00000456515 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
SEC22C-214ENST00000456515 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
SEC22C-214ENST00000456515 REREQ9P2R6 1566 aa11.22□□□□□ -0.61
SEC22C-214ENST00000456515 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms