RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ZFYVE16Q7Z3T8 1539 aa21.16■□□□□ 0.98
TREX1-203ENST00000456089 SCAPERQ9BY12 1400 aa21.15■□□□□ 0.98
TREX1-203ENST00000456089 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
TREX1-203ENST00000456089 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
TREX1-203ENST00000456089 CDC42BPBQ9Y5S2 1711 aa21.12■□□□□ 0.97
TREX1-203ENST00000456089 CDK11AQ9UQ88 783 aaPredicted RBP21.12■□□□□ 0.97
TREX1-203ENST00000456089 ARHGAP5Q13017 1502 aa21.1■□□□□ 0.97
TREX1-203ENST00000456089 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
TREX1-203ENST00000456089 CLIP1P30622 1438 aa21.08■□□□□ 0.97
TREX1-203ENST00000456089 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.97
TREX1-203ENST00000456089 CASKIN1Q8WXD9 1431 aa21.08■□□□□ 0.97
TREX1-203ENST00000456089 FER1L4A9Z1Z3 1794 aa21.07■□□□□ 0.96
TREX1-203ENST00000456089 MLECQ14165 292 aa21.06■□□□□ 0.96
TREX1-203ENST00000456089 ILDR1Q86SU0 546 aaPredicted RBP21.06■□□□□ 0.96
TREX1-203ENST00000456089 MAGI2Q86UL8 1455 aa21.06■□□□□ 0.96
TREX1-203ENST00000456089 PREX2Q70Z35 1606 aa21.05■□□□□ 0.96
TREX1-203ENST00000456089 CDC42BPAQ5VT25 1732 aa21.05■□□□□ 0.96
TREX1-203ENST00000456089 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
TREX1-203ENST00000456089 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
TREX1-203ENST00000456089 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
TREX1-203ENST00000456089 ITSN2Q9NZM3 1697 aa21■□□□□ 0.95
TREX1-203ENST00000456089 ATP10AO60312 1499 aa21■□□□□ 0.95
TREX1-203ENST00000456089 ZNF518AQ6AHZ1 1483 aa21■□□□□ 0.95
TREX1-203ENST00000456089 KDM5CP41229 1560 aa20.99■□□□□ 0.95
TREX1-203ENST00000456089 LMTK3Q96Q04 1460 aa20.99■□□□□ 0.95
TREX1-203ENST00000456089 C9orf84Q5VXU9 1444 aa20.98■□□□□ 0.95
TREX1-203ENST00000456089 ABCC1P33527 1531 aa20.97■□□□□ 0.95
TREX1-203ENST00000456089 ARHGEF12Q9NZN5 1544 aa20.97■□□□□ 0.95
TREX1-203ENST00000456089 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
TREX1-203ENST00000456089 ABCA6Q8N139 1617 aa20.96■□□□□ 0.95
TREX1-203ENST00000456089 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
TREX1-203ENST00000456089 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
TREX1-203ENST00000456089 HSPA2P54652 639 aa20.91■□□□□ 0.94
TREX1-203ENST00000456089 SAMD9LQ8IVG5 1584 aa20.91■□□□□ 0.94
TREX1-203ENST00000456089 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
TREX1-203ENST00000456089 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
TREX1-203ENST00000456089 CEBPAP49715 358 aaPredicted RBP20.87■□□□□ 0.93
TREX1-203ENST00000456089 SYCP2Q9BX26 1530 aa20.87■□□□□ 0.93
TREX1-203ENST00000456089 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
TREX1-203ENST00000456089 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
TREX1-203ENST00000456089 REREQ9P2R6 1566 aa20.85■□□□□ 0.93
TREX1-203ENST00000456089 PREX1Q8TCU6 1659 aa20.84■□□□□ 0.93
TREX1-203ENST00000456089 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
TREX1-203ENST00000456089 C3P01024 1663 aa20.82■□□□□ 0.92
TREX1-203ENST00000456089 HNRNPMP52272 730 aaKnown RBP eCLIP20.81■□□□□ 0.92
TREX1-203ENST00000456089 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
TREX1-203ENST00000456089 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
TREX1-203ENST00000456089 TIAM1Q13009 1591 aa20.78■□□□□ 0.92
TREX1-203ENST00000456089 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
TREX1-203ENST00000456089 AGLP35573 1532 aa20.77■□□□□ 0.92
TREX1-203ENST00000456089 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
TREX1-203ENST00000456089 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
TREX1-203ENST00000456089 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
TREX1-203ENST00000456089 ATP7AQ04656 1500 aa20.74■□□□□ 0.91
TREX1-203ENST00000456089 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
TREX1-203ENST00000456089 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
TREX1-203ENST00000456089 ZNF644Q9H582 1327 aaPredicted RBP20.73■□□□□ 0.91
TREX1-203ENST00000456089 STRCQ7RTU9 1775 aa20.72■□□□□ 0.91
TREX1-203ENST00000456089 LOC105371045A0A1W2PR82 267 aa20.71■□□□□ 0.91
TREX1-203ENST00000456089 FBXO41Q8TF61 875 aa20.7■□□□□ 0.9
TREX1-203ENST00000456089 PLEKHH2Q8IVE3 1493 aa20.69■□□□□ 0.9
TREX1-203ENST00000456089 ESF1Q9H501 851 aaKnown RBP20.69■□□□□ 0.9
TREX1-203ENST00000456089 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
TREX1-203ENST00000456089 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
TREX1-203ENST00000456089 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
TREX1-203ENST00000456089 PLXNC1O60486 1568 aa20.67■□□□□ 0.9
TREX1-203ENST00000456089 MROH2AA6NES4 1674 aa20.66■□□□□ 0.9
TREX1-203ENST00000456089 ADGBQ8N7X0 1667 aa20.66■□□□□ 0.9
TREX1-203ENST00000456089 A2MP01023 1474 aa20.64■□□□□ 0.89
TREX1-203ENST00000456089 NCOA2Q15596 1464 aa20.63■□□□□ 0.89
TREX1-203ENST00000456089 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
TREX1-203ENST00000456089 CNTLNQ9NXG0 1405 aa20.61■□□□□ 0.89
TREX1-203ENST00000456089 CAMSAP2Q08AD1 1489 aa20.59■□□□□ 0.89
TREX1-203ENST00000456089 GGT6Q6P531 493 aa20.58■□□□□ 0.89
TREX1-203ENST00000456089 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
TREX1-203ENST00000456089 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
TREX1-203ENST00000456089 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
TREX1-203ENST00000456089 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
TREX1-203ENST00000456089 CCDC141Q6ZP82 1450 aa20.54■□□□□ 0.88
TREX1-203ENST00000456089 LRRC9Q6ZRR7 1453 aa20.53■□□□□ 0.88
TREX1-203ENST00000456089 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.88
TREX1-203ENST00000456089 RTEL1-TNFRSF6BF6WH68 1400 aa20.52■□□□□ 0.87
TREX1-203ENST00000456089 NPATQ14207 1427 aa20.52■□□□□ 0.87
TREX1-203ENST00000456089 KANK4Q5T7N3 995 aaPredicted RBP20.5■□□□□ 0.87
TREX1-203ENST00000456089 ZNF142P52746 1687 aaPredicted RBP20.5■□□□□ 0.87
TREX1-203ENST00000456089 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
TREX1-203ENST00000456089 PTPRKQ15262 1439 aa20.49■□□□□ 0.87
TREX1-203ENST00000456089 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
TREX1-203ENST00000456089 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
TREX1-203ENST00000456089 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
TREX1-203ENST00000456089 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
TREX1-203ENST00000456089 PTPRTO14522 1441 aa20.46■□□□□ 0.87
TREX1-203ENST00000456089 KIF3BO15066 747 aa20.46■□□□□ 0.87
TREX1-203ENST00000456089 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
TREX1-203ENST00000456089 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
TREX1-203ENST00000456089 LTBP4Q8N2S1 1624 aa20.41■□□□□ 0.86
TREX1-203ENST00000456089 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
TREX1-203ENST00000456089 DNMT1P26358 1616 aaKnown RBP20.39■□□□□ 0.86
TREX1-203ENST00000456089 MYOM3Q5VTT5 1437 aa20.39■□□□□ 0.85
TREX1-203ENST00000456089 TSPY4P0CV99 314 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms