RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
TOP3B-212ENST00000456075 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
TOP3B-212ENST00000456075 PREX2Q70Z35 1606 aa16.27■□□□□ 0.2
TOP3B-212ENST00000456075 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
TOP3B-212ENST00000456075 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-212ENST00000456075 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-212ENST00000456075 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
TOP3B-212ENST00000456075 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
TOP3B-212ENST00000456075 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
TOP3B-212ENST00000456075 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
TOP3B-212ENST00000456075 CDC42BPAQ5VT25 1732 aa16.23■□□□□ 0.19
TOP3B-212ENST00000456075 RICTORQ6R327 1708 aa16.23■□□□□ 0.19
TOP3B-212ENST00000456075 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
TOP3B-212ENST00000456075 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
TOP3B-212ENST00000456075 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
TOP3B-212ENST00000456075 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
TOP3B-212ENST00000456075 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
TOP3B-212ENST00000456075 ARID4BQ4LE39 1312 aaPredicted RBP16.2■□□□□ 0.18
TOP3B-212ENST00000456075 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
TOP3B-212ENST00000456075 ZMYM4Q5VZL5 1548 aa16.19■□□□□ 0.18
TOP3B-212ENST00000456075 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
TOP3B-212ENST00000456075 ITSN2Q9NZM3 1697 aa16.19■□□□□ 0.18
TOP3B-212ENST00000456075 MAGI2Q86UL8 1455 aa16.19■□□□□ 0.18
TOP3B-212ENST00000456075 ABCC1P33527 1531 aa16.19■□□□□ 0.18
TOP3B-212ENST00000456075 ARHGEF40Q8TER5 1519 aa16.19■□□□□ 0.18
TOP3B-212ENST00000456075 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
TOP3B-212ENST00000456075 AFAP1Q8N556 730 aa16.18■□□□□ 0.18
TOP3B-212ENST00000456075 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
TOP3B-212ENST00000456075 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
TOP3B-212ENST00000456075 SAMD9LQ8IVG5 1584 aa16.15■□□□□ 0.18
TOP3B-212ENST00000456075 SYCP2Q9BX26 1530 aa16.14■□□□□ 0.18
TOP3B-212ENST00000456075 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
TOP3B-212ENST00000456075 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■■■■ 28.8
TOP3B-212ENST00000456075 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.17
TOP3B-212ENST00000456075 KDM5CP41229 1560 aa16.13■□□□□ 0.17
TOP3B-212ENST00000456075 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
TOP3B-212ENST00000456075 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
TOP3B-212ENST00000456075 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
TOP3B-212ENST00000456075 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
TOP3B-212ENST00000456075 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-212ENST00000456075 ATP10AO60312 1499 aa16.1■□□□□ 0.17
TOP3B-212ENST00000456075 C9orf84Q5VXU9 1444 aa16.1■□□□□ 0.17
TOP3B-212ENST00000456075 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
TOP3B-212ENST00000456075 MYOM3Q5VTT5 1437 aa16.08■□□□□ 0.16
TOP3B-212ENST00000456075 CAMSAP2Q08AD1 1489 aa16.08■□□□□ 0.16
TOP3B-212ENST00000456075 MLECQ14165 292 aa16.06■□□□□ 0.16
TOP3B-212ENST00000456075 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
TOP3B-212ENST00000456075 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
TOP3B-212ENST00000456075 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
TOP3B-212ENST00000456075 ABCA6Q8N139 1617 aa16.04■□□□□ 0.16
TOP3B-212ENST00000456075 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
TOP3B-212ENST00000456075 BCORL1Q5H9F3 1711 aa16.03■□□□□ 0.16
TOP3B-212ENST00000456075 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
TOP3B-212ENST00000456075 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
TOP3B-212ENST00000456075 ATP7AQ04656 1500 aa16.03■□□□□ 0.16
TOP3B-212ENST00000456075 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
TOP3B-212ENST00000456075 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.15
TOP3B-212ENST00000456075 ADAMTSL3P82987 1691 aa16■□□□□ 0.15
TOP3B-212ENST00000456075 REREQ9P2R6 1566 aa16■□□□□ 0.15
TOP3B-212ENST00000456075 INO80Q9ULG1 1556 aaPredicted RBP16■□□□□ 0.15
TOP3B-212ENST00000456075 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
TOP3B-212ENST00000456075 MADDQ8WXG6 1647 aa15.98■□□□□ 0.15
TOP3B-212ENST00000456075 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
TOP3B-212ENST00000456075 ARHGEF5Q12774 1597 aa15.98■□□□□ 0.15
TOP3B-212ENST00000456075 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
TOP3B-212ENST00000456075 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
TOP3B-212ENST00000456075 PTPRMP28827 1452 aa15.97■□□□□ 0.15
TOP3B-212ENST00000456075 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
TOP3B-212ENST00000456075 PTPN23Q9H3S7 1636 aa15.96■□□□□ 0.15
TOP3B-212ENST00000456075 A2MP01023 1474 aa15.96■□□□□ 0.14
TOP3B-212ENST00000456075 AGLP35573 1532 aa15.95■□□□□ 0.14
TOP3B-212ENST00000456075 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
TOP3B-212ENST00000456075 FAM50AQ14320 339 aaKnown RBP15.94■□□□□ 0.14
TOP3B-212ENST00000456075 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
TOP3B-212ENST00000456075 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
TOP3B-212ENST00000456075 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
TOP3B-212ENST00000456075 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
TOP3B-212ENST00000456075 DHX29Q7Z478 1369 aaKnown RBP15.9■□□□□ 0.14
TOP3B-212ENST00000456075 GGT6Q6P531 493 aa15.9■□□□□ 0.14
TOP3B-212ENST00000456075 PLXNC1O60486 1568 aa15.9■□□□□ 0.14
TOP3B-212ENST00000456075 MAST1Q9Y2H9 1570 aa15.88■□□□□ 0.13
TOP3B-212ENST00000456075 DAPK1P53355 1430 aa15.88■□□□□ 0.13
TOP3B-212ENST00000456075 ABCC5O15440 1437 aa15.87■□□□□ 0.13
TOP3B-212ENST00000456075 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
TOP3B-212ENST00000456075 SHANK2Q9UPX8 1470 aa15.87■□□□□ 0.13
TOP3B-212ENST00000456075 KIF3BO15066 747 aa15.87■□□□□ 0.13
TOP3B-212ENST00000456075 DNMT1P26358 1616 aaKnown RBP15.86■□□□□ 0.13
TOP3B-212ENST00000456075 CHIC2Q9UKJ5 165 aa15.85■□□□□ 0.13
TOP3B-212ENST00000456075 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
TOP3B-212ENST00000456075 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
TOP3B-212ENST00000456075 KIF15Q9NS87 1388 aa15.84■□□□□ 0.13
TOP3B-212ENST00000456075 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.12
TOP3B-212ENST00000456075 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.12
TOP3B-212ENST00000456075 ANKRD30AQ9BXX3 1397 aa15.83■□□□□ 0.12
TOP3B-212ENST00000456075 DUOX2Q9NRD8 1548 aa15.82■□□□□ 0.12
TOP3B-212ENST00000456075 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
TOP3B-212ENST00000456075 ITGAEP38570 1179 aa15.79■□□□□ 0.12
TOP3B-212ENST00000456075 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
TOP3B-212ENST00000456075 CLTCQ00610 1675 aaKnown RBP15.78■□□□□ 0.12
TOP3B-212ENST00000456075 ERBINQ96RT1 1412 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms