RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
R3HDM1-212ENST00000456040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
R3HDM1-212ENST00000456040 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
R3HDM1-212ENST00000456040 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
R3HDM1-212ENST00000456040 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
R3HDM1-212ENST00000456040 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
R3HDM1-212ENST00000456040 NLRP6P59044 892 aa11.31□□□□□ -0.6
R3HDM1-212ENST00000456040 ARSIQ5FYB1 569 aa11.31□□□□□ -0.6
R3HDM1-212ENST00000456040 ZNF316A6NFI3 1004 aaPredicted RBP11.27□□□□□ -0.61
R3HDM1-212ENST00000456040 MS4A4AQ96JQ5 239 aa11.27□□□□□ -0.61
R3HDM1-212ENST00000456040 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
R3HDM1-212ENST00000456040 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
R3HDM1-212ENST00000456040 PBX2P40425 430 aa11.2□□□□□ -0.62
R3HDM1-212ENST00000456040 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
R3HDM1-212ENST00000456040 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
R3HDM1-212ENST00000456040 KHSRPQ92945 711 aaKnown RBP eCLIP11.17□□□□□ -0.623e-6■■■■□ 21.5
R3HDM1-212ENST00000456040 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
R3HDM1-212ENST00000456040 STK25O00506 426 aa11.13□□□□□ -0.63
R3HDM1-212ENST00000456040 NUDT7P0C024 238 aa11.13□□□□□ -0.63
R3HDM1-212ENST00000456040 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
R3HDM1-212ENST00000456040 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
R3HDM1-212ENST00000456040 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
R3HDM1-212ENST00000456040 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
R3HDM1-212ENST00000456040 SLC34A2O95436 690 aa11.08□□□□□ -0.64
R3HDM1-212ENST00000456040 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
R3HDM1-212ENST00000456040 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
R3HDM1-212ENST00000456040 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
R3HDM1-212ENST00000456040 KIF3CO14782 793 aa11.07□□□□□ -0.64
R3HDM1-212ENST00000456040 PLA2G2EQ9NZK7 142 aa11.06□□□□□ -0.64
R3HDM1-212ENST00000456040 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
R3HDM1-212ENST00000456040 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
R3HDM1-212ENST00000456040 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
R3HDM1-212ENST00000456040 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
R3HDM1-212ENST00000456040 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
R3HDM1-212ENST00000456040 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
R3HDM1-212ENST00000456040 TBC1D12O60347 775 aa10.96□□□□□ -0.65
R3HDM1-212ENST00000456040 TK2O00142 265 aa10.95□□□□□ -0.66
R3HDM1-212ENST00000456040 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
R3HDM1-212ENST00000456040 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
R3HDM1-212ENST00000456040 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-212ENST00000456040 KCTD12Q96CX2 325 aaKnown RBP10.87□□□□□ -0.67
R3HDM1-212ENST00000456040 PSEN2P49810 448 aa10.85□□□□□ -0.67
R3HDM1-212ENST00000456040 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
R3HDM1-212ENST00000456040 RGL2O15211 777 aa10.84□□□□□ -0.67
R3HDM1-212ENST00000456040 FOXK1P85037 733 aa10.84□□□□□ -0.67
R3HDM1-212ENST00000456040 HRO43593 1189 aa10.83□□□□□ -0.68
R3HDM1-212ENST00000456040 PPP1R37O75864 691 aa10.83□□□□□ -0.68
R3HDM1-212ENST00000456040 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
R3HDM1-212ENST00000456040 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
R3HDM1-212ENST00000456040 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
R3HDM1-212ENST00000456040 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
R3HDM1-212ENST00000456040 PKD2Q13563 968 aa10.79□□□□□ -0.68
R3HDM1-212ENST00000456040 GOLGA8CPA6NN73 597 aa10.78□□□□□ -0.68
R3HDM1-212ENST00000456040 PTPN5P54829 565 aa10.77□□□□□ -0.69
R3HDM1-212ENST00000456040 RGS20O76081 388 aa10.75□□□□□ -0.69
R3HDM1-212ENST00000456040 DSG2Q14126 1118 aa10.74□□□□□ -0.69
R3HDM1-212ENST00000456040 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
R3HDM1-212ENST00000456040 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
R3HDM1-212ENST00000456040 RYDENQ9NUL5 291 aaKnown RBP10.71□□□□□ -0.69
R3HDM1-212ENST00000456040 PTPREP23469 700 aa10.69□□□□□ -0.7
R3HDM1-212ENST00000456040 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
R3HDM1-212ENST00000456040 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
R3HDM1-212ENST00000456040 HS6ST3Q8IZP7 471 aa10.68□□□□□ -0.7
R3HDM1-212ENST00000456040 MRPL50Q8N5N7 158 aaKnown RBP10.68□□□□□ -0.7
R3HDM1-212ENST00000456040 IRX2Q9BZI1 471 aaPredicted RBP10.68□□□□□ -0.7
R3HDM1-212ENST00000456040 IFFO2Q5TF58 517 aa10.67□□□□□ -0.7
R3HDM1-212ENST00000456040 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
R3HDM1-212ENST00000456040 OXER1Q8TDS5 423 aa10.66□□□□□ -0.7
R3HDM1-212ENST00000456040 WNT2BQ93097 391 aa10.65□□□□□ -0.7
R3HDM1-212ENST00000456040 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
R3HDM1-212ENST00000456040 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
R3HDM1-212ENST00000456040 THSD4Q6ZMP0 1018 aa10.64□□□□□ -0.71
R3HDM1-212ENST00000456040 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
R3HDM1-212ENST00000456040 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
R3HDM1-212ENST00000456040 PDE4AP27815 886 aa10.6□□□□□ -0.71
R3HDM1-212ENST00000456040 FOSBP53539 338 aa10.6□□□□□ -0.71
R3HDM1-212ENST00000456040 A0A0G2JS52 829 aa10.59□□□□□ -0.71
R3HDM1-212ENST00000456040 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
R3HDM1-212ENST00000456040 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
R3HDM1-212ENST00000456040 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
R3HDM1-212ENST00000456040 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
R3HDM1-212ENST00000456040 EVI5O60447 810 aa10.55□□□□□ -0.72
R3HDM1-212ENST00000456040 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
R3HDM1-212ENST00000456040 MAP3K9P80192 1104 aa10.54□□□□□ -0.72
R3HDM1-212ENST00000456040 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
R3HDM1-212ENST00000456040 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
R3HDM1-212ENST00000456040 ANO8Q9HCE9 1232 aaPredicted RBP10.53□□□□□ -0.72
R3HDM1-212ENST00000456040 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
R3HDM1-212ENST00000456040 DNAJC5Q9H3Z4 198 aa10.48□□□□□ -0.73
R3HDM1-212ENST00000456040 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
R3HDM1-212ENST00000456040 PPP1R3GB7ZBB8 358 aa10.47□□□□□ -0.73
R3HDM1-212ENST00000456040 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
R3HDM1-212ENST00000456040 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
R3HDM1-212ENST00000456040 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
R3HDM1-212ENST00000456040 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
R3HDM1-212ENST00000456040 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
R3HDM1-212ENST00000456040 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
R3HDM1-212ENST00000456040 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
R3HDM1-212ENST00000456040 Q6ZNB5 142 aa10.43□□□□□ -0.74
R3HDM1-212ENST00000456040 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms