RNA–Protein interactions for RNA: ENST00000455939.1

LINC00161-202, long intergenic non-protein coding RNA 161, humanhuman

TSL 2

Gene LINC00161, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-202ENST00000455939 MICALL2Q8IY33 904 aa12.36□□□□□ -0.43
LINC00161-202ENST00000455939 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
LINC00161-202ENST00000455939 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
LINC00161-202ENST00000455939 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
LINC00161-202ENST00000455939 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
LINC00161-202ENST00000455939 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
LINC00161-202ENST00000455939 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
LINC00161-202ENST00000455939 TMC2Q8TDI7 906 aa12.22□□□□□ -0.45
LINC00161-202ENST00000455939 PDE4AP27815 886 aa12.19□□□□□ -0.46
LINC00161-202ENST00000455939 VSIG10Q8N0Z9 540 aa12.18□□□□□ -0.46
LINC00161-202ENST00000455939 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
LINC00161-202ENST00000455939 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
LINC00161-202ENST00000455939 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
LINC00161-202ENST00000455939 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
LINC00161-202ENST00000455939 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
LINC00161-202ENST00000455939 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
LINC00161-202ENST00000455939 CRISPLD2Q9H0B8 497 aa12.16□□□□□ -0.46
LINC00161-202ENST00000455939 PCDH10Q9P2E7 1040 aa12.16□□□□□ -0.46
LINC00161-202ENST00000455939 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
LINC00161-202ENST00000455939 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
LINC00161-202ENST00000455939 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
LINC00161-202ENST00000455939 KIF3CO14782 793 aa12.1□□□□□ -0.47
LINC00161-202ENST00000455939 DSG2Q14126 1118 aa12.09□□□□□ -0.47
LINC00161-202ENST00000455939 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
LINC00161-202ENST00000455939 ST18O60284 1047 aa12.07□□□□□ -0.48
LINC00161-202ENST00000455939 FOXK1P85037 733 aa12.07□□□□□ -0.48
LINC00161-202ENST00000455939 MFSD10Q14728 455 aa12.06□□□□□ -0.48
LINC00161-202ENST00000455939 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
LINC00161-202ENST00000455939 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
LINC00161-202ENST00000455939 E2F4Q16254 413 aa12□□□□□ -0.49
LINC00161-202ENST00000455939 P3H3Q8IVL6 736 aa11.96□□□□□ -0.49
LINC00161-202ENST00000455939 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00161-202ENST00000455939 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
LINC00161-202ENST00000455939 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
LINC00161-202ENST00000455939 SNPHO15079 494 aa11.93□□□□□ -0.5
LINC00161-202ENST00000455939 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
LINC00161-202ENST00000455939 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
LINC00161-202ENST00000455939 RIMBP2O15034 1052 aa11.91□□□□□ -0.5
LINC00161-202ENST00000455939 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
LINC00161-202ENST00000455939 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
LINC00161-202ENST00000455939 DPYSL4O14531 572 aa11.88□□□□□ -0.51
LINC00161-202ENST00000455939 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
LINC00161-202ENST00000455939 TBC1D12O60347 775 aa11.87□□□□□ -0.51
LINC00161-202ENST00000455939 SLC34A2O95436 690 aa11.87□□□□□ -0.51
LINC00161-202ENST00000455939 MARVELD3Q96A59 401 aa11.87□□□□□ -0.51
LINC00161-202ENST00000455939 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
LINC00161-202ENST00000455939 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
LINC00161-202ENST00000455939 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
LINC00161-202ENST00000455939 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
LINC00161-202ENST00000455939 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
LINC00161-202ENST00000455939 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00161-202ENST00000455939 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
LINC00161-202ENST00000455939 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
LINC00161-202ENST00000455939 NBR1Q14596 966 aa11.79□□□□□ -0.52
LINC00161-202ENST00000455939 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
LINC00161-202ENST00000455939 EVI5O60447 810 aa11.78□□□□□ -0.52
LINC00161-202ENST00000455939 NUDT7P0C024 238 aa11.78□□□□□ -0.52
LINC00161-202ENST00000455939 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
LINC00161-202ENST00000455939 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
LINC00161-202ENST00000455939 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
LINC00161-202ENST00000455939 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
LINC00161-202ENST00000455939 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
LINC00161-202ENST00000455939 PDIA6Q15084 440 aa11.74□□□□□ -0.53
LINC00161-202ENST00000455939 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
LINC00161-202ENST00000455939 SEMA3EO15041 775 aa11.72□□□□□ -0.53
LINC00161-202ENST00000455939 EMP3P54852 163 aa11.71□□□□□ -0.53
LINC00161-202ENST00000455939 BCANQ96GW7 911 aa11.71□□□□□ -0.53
LINC00161-202ENST00000455939 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
LINC00161-202ENST00000455939 DDX12PQ92771 950 aa11.69□□□□□ -0.54
LINC00161-202ENST00000455939 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
LINC00161-202ENST00000455939 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
LINC00161-202ENST00000455939 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
LINC00161-202ENST00000455939 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
LINC00161-202ENST00000455939 ANO8Q9HCE9 1232 aaPredicted RBP11.66□□□□□ -0.54
LINC00161-202ENST00000455939 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
LINC00161-202ENST00000455939 ERBB3P21860 1342 aa11.64□□□□□ -0.55
LINC00161-202ENST00000455939 MLLT3P42568 568 aaPredicted RBP11.64□□□□□ -0.55
LINC00161-202ENST00000455939 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
LINC00161-202ENST00000455939 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
LINC00161-202ENST00000455939 TULP1O00294 542 aaPredicted RBP11.63□□□□□ -0.55
LINC00161-202ENST00000455939 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
LINC00161-202ENST00000455939 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
LINC00161-202ENST00000455939 PTGER2P43116 358 aa11.62□□□□□ -0.55
LINC00161-202ENST00000455939 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
LINC00161-202ENST00000455939 VARS2Q5ST30 1063 aaKnown RBP11.6□□□□□ -0.55
LINC00161-202ENST00000455939 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
LINC00161-202ENST00000455939 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
LINC00161-202ENST00000455939 PHF14O94880 888 aa11.59□□□□□ -0.55
LINC00161-202ENST00000455939 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
LINC00161-202ENST00000455939 FOSBP53539 338 aa11.58□□□□□ -0.56
LINC00161-202ENST00000455939 PCDHGA10Q9Y5H3 936 aa11.58□□□□□ -0.56
LINC00161-202ENST00000455939 TYW1BQ6NUM6 668 aa11.56□□□□□ -0.56
LINC00161-202ENST00000455939 RBM33Q96EV2 1170 aaKnown RBP11.56□□□□□ -0.56
LINC00161-202ENST00000455939 EPAS1Q99814 870 aa11.56□□□□□ -0.56
LINC00161-202ENST00000455939 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
LINC00161-202ENST00000455939 FBXW7Q969H0 707 aa11.54□□□□□ -0.56
LINC00161-202ENST00000455939 MAP3K7O43318 606 aa11.53□□□□□ -0.56
LINC00161-202ENST00000455939 OSBPP22059 807 aa11.53□□□□□ -0.56
LINC00161-202ENST00000455939 RBM26Q5T8P6 1007 aaKnown RBP11.51□□□□□ -0.57
LINC00161-202ENST00000455939 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms