RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 SCAPERQ9BY12 1400 aa26.67■■□□□ 1.86
PTPA-225ENST00000455240 CDK11AQ9UQ88 783 aaPredicted RBP26.67■■□□□ 1.86
PTPA-225ENST00000455240 KIF14Q15058 1648 aa26.67■■□□□ 1.86
PTPA-225ENST00000455240 SIGLEC1Q9BZZ2 1709 aa26.65■■□□□ 1.86
PTPA-225ENST00000455240 PCF11O94913 1555 aaKnown RBP26.64■■□□□ 1.86
PTPA-225ENST00000455240 TROQ12816 1431 aaPredicted RBP26.64■■□□□ 1.85
PTPA-225ENST00000455240 LRRIQ1Q96JM4 1722 aa26.63■■□□□ 1.85
PTPA-225ENST00000455240 CLIP1P30622 1438 aa26.6■■□□□ 1.85
PTPA-225ENST00000455240 EFCAB2Q5VUJ9 269 aa26.6■■□□□ 1.85
PTPA-225ENST00000455240 LMTK3Q96Q04 1460 aa26.6■■□□□ 1.85
PTPA-225ENST00000455240 ARHGAP5Q13017 1502 aa26.56■■□□□ 1.84
PTPA-225ENST00000455240 FER1L4A9Z1Z3 1794 aa26.55■■□□□ 1.84
PTPA-225ENST00000455240 ATP10AO60312 1499 aa26.54■■□□□ 1.84
PTPA-225ENST00000455240 ZNF518AQ6AHZ1 1483 aa26.54■■□□□ 1.84
PTPA-225ENST00000455240 C9orf84Q5VXU9 1444 aa26.53■■□□□ 1.84
PTPA-225ENST00000455240 CCDC18Q5T9S5 1454 aa26.52■■□□□ 1.84
PTPA-225ENST00000455240 CASKIN1Q8WXD9 1431 aa26.52■■□□□ 1.84
PTPA-225ENST00000455240 KDM5CP41229 1560 aa26.51■■□□□ 1.83
PTPA-225ENST00000455240 CDC42BPBQ9Y5S2 1711 aa26.49■■□□□ 1.83
PTPA-225ENST00000455240 MLECQ14165 292 aa26.49■■□□□ 1.83
PTPA-225ENST00000455240 ARHGEF12Q9NZN5 1544 aa26.49■■□□□ 1.83
PTPA-225ENST00000455240 PREX2Q70Z35 1606 aa26.47■■□□□ 1.83
PTPA-225ENST00000455240 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
PTPA-225ENST00000455240 FYCO1Q9BQS8 1478 aa26.43■■□□□ 1.82
PTPA-225ENST00000455240 AFAP1Q8N556 730 aa26.42■■□□□ 1.82
PTPA-225ENST00000455240 ABCC1P33527 1531 aa26.42■■□□□ 1.82
PTPA-225ENST00000455240 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
PTPA-225ENST00000455240 REREQ9P2R6 1566 aa26.39■■□□□ 1.82
PTPA-225ENST00000455240 HSPA2P54652 639 aa26.39■■□□□ 1.82
PTPA-225ENST00000455240 FBXO41Q8TF61 875 aa26.39■■□□□ 1.82
PTPA-225ENST00000455240 ITSN2Q9NZM3 1697 aa26.38■■□□□ 1.81
PTPA-225ENST00000455240 MLH3Q9UHC1 1453 aa26.38■■□□□ 1.81
PTPA-225ENST00000455240 CDC42BPAQ5VT25 1732 aa26.38■■□□□ 1.81
PTPA-225ENST00000455240 ABCA6Q8N139 1617 aa26.38■■□□□ 1.81
PTPA-225ENST00000455240 MYT1LQ9UL68 1186 aa26.35■■□□□ 1.81
PTPA-225ENST00000455240 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
PTPA-225ENST00000455240 PREX1Q8TCU6 1659 aa26.34■■□□□ 1.81
PTPA-225ENST00000455240 AGLP35573 1532 aa26.29■■□□□ 1.8
PTPA-225ENST00000455240 KIDINS220Q9ULH0 1771 aa26.28■■□□□ 1.8
PTPA-225ENST00000455240 SAMD9LQ8IVG5 1584 aa26.26■■□□□ 1.79
PTPA-225ENST00000455240 CEBPAP49715 358 aaPredicted RBP26.26■■□□□ 1.79
PTPA-225ENST00000455240 GPATCH8Q9UKJ3 1502 aaKnown RBP26.24■■□□□ 1.79
PTPA-225ENST00000455240 SETD1BQ9UPS6 1966 aaKnown RBP26.23■■□□□ 1.79
PTPA-225ENST00000455240 SYCP2Q9BX26 1530 aa26.23■■□□□ 1.79
PTPA-225ENST00000455240 C3P01024 1663 aa26.21■■□□□ 1.79
PTPA-225ENST00000455240 UHRF1BP1Q6BDS2 1440 aa26.21■■□□□ 1.79
PTPA-225ENST00000455240 ZNF777Q9ULD5 760 aaPredicted RBP26.2■■□□□ 1.78
PTPA-225ENST00000455240 PLEKHH2Q8IVE3 1493 aa26.17■■□□□ 1.78
PTPA-225ENST00000455240 CNTLNQ9NXG0 1405 aa26.15■■□□□ 1.78
PTPA-225ENST00000455240 KIAA1107Q9UPP5 1409 aa26.15■■□□□ 1.78
PTPA-225ENST00000455240 ESF1Q9H501 851 aaKnown RBP26.15■■□□□ 1.78
PTPA-225ENST00000455240 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
PTPA-225ENST00000455240 CCNB3Q8WWL7 1395 aa26.15■■□□□ 1.78
PTPA-225ENST00000455240 STRCQ7RTU9 1775 aa26.14■■□□□ 1.78
PTPA-225ENST00000455240 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.77
PTPA-225ENST00000455240 CFDP1Q9UEE9 299 aaPredicted RBP26.13■■□□□ 1.77
PTPA-225ENST00000455240 ATP7AQ04656 1500 aa26.13■■□□□ 1.77
PTPA-225ENST00000455240 INO80Q9ULG1 1556 aaPredicted RBP26.12■■□□□ 1.77
PTPA-225ENST00000455240 HNRNPMP52272 730 aaKnown RBP eCLIP26.11■■□□□ 1.77
PTPA-225ENST00000455240 CERKQ8TCT0 537 aa26.1■■□□□ 1.77
PTPA-225ENST00000455240 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
PTPA-225ENST00000455240 EHBP1L1Q8N3D4 1523 aa26.09■■□□□ 1.77
PTPA-225ENST00000455240 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.77
PTPA-225ENST00000455240 PLXNC1O60486 1568 aa26.08■■□□□ 1.77
PTPA-225ENST00000455240 TIAM1Q13009 1591 aa26.07■■□□□ 1.76
PTPA-225ENST00000455240 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
PTPA-225ENST00000455240 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
PTPA-225ENST00000455240 A2MP01023 1474 aa26.04■■□□□ 1.76
PTPA-225ENST00000455240 NPATQ14207 1427 aa26.03■■□□□ 1.76
PTPA-225ENST00000455240 ADGBQ8N7X0 1667 aa26■■□□□ 1.75
PTPA-225ENST00000455240 PTPRTO14522 1441 aa25.99■■□□□ 1.75
PTPA-225ENST00000455240 CLTCQ00610 1675 aaKnown RBP25.99■■□□□ 1.75
PTPA-225ENST00000455240 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
PTPA-225ENST00000455240 MBD5Q9P267 1494 aa25.98■■□□□ 1.75
PTPA-225ENST00000455240 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
PTPA-225ENST00000455240 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
PTPA-225ENST00000455240 RTEL1-TNFRSF6BF6WH68 1400 aa25.92■■□□□ 1.74
PTPA-225ENST00000455240 CAMSAP1Q5T5Y3 1602 aa25.91■■□□□ 1.74
PTPA-225ENST00000455240 MYO3AQ8NEV4 1616 aa25.91■■□□□ 1.74
PTPA-225ENST00000455240 NCOA2Q15596 1464 aa25.91■■□□□ 1.74
PTPA-225ENST00000455240 ZNF142P52746 1687 aaPredicted RBP25.9■■□□□ 1.74
PTPA-225ENST00000455240 GGT6Q6P531 493 aa25.89■■□□□ 1.74
PTPA-225ENST00000455240 PTPRKQ15262 1439 aa25.88■■□□□ 1.73
PTPA-225ENST00000455240 CAMSAP2Q08AD1 1489 aa25.87■■□□□ 1.73
PTPA-225ENST00000455240 CCDC141Q6ZP82 1450 aa25.87■■□□□ 1.73
PTPA-225ENST00000455240 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
PTPA-225ENST00000455240 CEP170BQ9Y4F5 1589 aaPredicted RBP25.85■■□□□ 1.73
PTPA-225ENST00000455240 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
PTPA-225ENST00000455240 DHX29Q7Z478 1369 aaKnown RBP25.83■■□□□ 1.73
PTPA-225ENST00000455240 PLA2R1Q13018 1463 aa25.82■■□□□ 1.72
PTPA-225ENST00000455240 VPS8Q8N3P4 1428 aa25.8■■□□□ 1.72
PTPA-225ENST00000455240 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
PTPA-225ENST00000455240 IQSEC2Q5JU85 1478 aa25.79■■□□□ 1.72
PTPA-225ENST00000455240 FAM135AQ9P2D6 1515 aa25.78■■□□□ 1.72
PTPA-225ENST00000455240 RSPH4AQ5TD94 716 aa25.78■■□□□ 1.72
PTPA-225ENST00000455240 NCKAP5LQ9HCH0 1330 aa25.76■■□□□ 1.71
PTPA-225ENST00000455240 TCOF1Q13428 1488 aaKnown RBP25.76■■□□□ 1.71
PTPA-225ENST00000455240 LRRC9Q6ZRR7 1453 aa25.76■■□□□ 1.71
PTPA-225ENST00000455240 KDM5DQ9BY66 1539 aa25.76■■□□□ 1.71
PTPA-225ENST00000455240 A2ML1A8K2U0 1454 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms