RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 KIF14Q15058 1648 aa11.25□□□□□ -0.61
XPC-204ENST00000455144 TROQ12816 1431 aaPredicted RBP11.24□□□□□ -0.61
XPC-204ENST00000455144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.24□□□□□ -0.61
XPC-204ENST00000455144 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
XPC-204ENST00000455144 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
XPC-204ENST00000455144 COL17A1Q9UMD9 1497 aaPredicted RBP11.22□□□□□ -0.61
XPC-204ENST00000455144 FANCAO15360 1455 aa11.21□□□□□ -0.61
XPC-204ENST00000455144 EFCAB2Q5VUJ9 269 aa11.21□□□□□ -0.61
XPC-204ENST00000455144 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
XPC-204ENST00000455144 PLCH2O75038 1416 aa11.2□□□□□ -0.62
XPC-204ENST00000455144 CEP162Q5TB80 1403 aa11.2□□□□□ -0.62
XPC-204ENST00000455144 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
XPC-204ENST00000455144 DENND4BO75064 1496 aaPredicted RBP11.19□□□□□ -0.62
XPC-204ENST00000455144 RICTORQ6R327 1708 aa11.17□□□□□ -0.62
XPC-204ENST00000455144 ADGRL1O94910 1474 aa11.16□□□□□ -0.62
XPC-204ENST00000455144 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
XPC-204ENST00000455144 MTUS2Q5JR59 1369 aa11.16□□□□□ -0.62
XPC-204ENST00000455144 ARHGAP5Q13017 1502 aa11.15□□□□□ -0.62
XPC-204ENST00000455144 PREX2Q70Z35 1606 aa11.15□□□□□ -0.62
XPC-204ENST00000455144 CDC42BPBQ9Y5S2 1711 aa11.15□□□□□ -0.63
XPC-204ENST00000455144 RAPGEF3O95398 923 aa11.14□□□□□ -0.63
XPC-204ENST00000455144 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
XPC-204ENST00000455144 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
XPC-204ENST00000455144 ZMYM4Q5VZL5 1548 aa11.13□□□□□ -0.63
XPC-204ENST00000455144 ZBTB22O15209 634 aa11.12□□□□□ -0.63
XPC-204ENST00000455144 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
XPC-204ENST00000455144 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
XPC-204ENST00000455144 FRMPD1Q5SYB0 1578 aa11.11□□□□□ -0.63
XPC-204ENST00000455144 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
XPC-204ENST00000455144 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
XPC-204ENST00000455144 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
XPC-204ENST00000455144 POGZQ7Z3K3 1410 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 VPS8Q8N3P4 1428 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 ZFYVE16Q7Z3T8 1539 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 ARHGEF40Q8TER5 1519 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 CACNB1Q02641 598 aaPredicted RBP11.1□□□□□ -0.63
XPC-204ENST00000455144 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
XPC-204ENST00000455144 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
XPC-204ENST00000455144 APLP2Q06481 763 aa11.09□□□□□ -0.63
XPC-204ENST00000455144 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
XPC-204ENST00000455144 MYT1LQ9UL68 1186 aa11.08□□□□□ -0.64
XPC-204ENST00000455144 MAP3K1Q13233 1512 aa11.08□□□□□ -0.64
XPC-204ENST00000455144 CFDP1Q9UEE9 299 aaPredicted RBP11.07□□□□□ -0.64
XPC-204ENST00000455144 TIAM1Q13009 1591 aa11.07□□□□□ -0.64
XPC-204ENST00000455144 BCORL1Q5H9F3 1711 aa11.06□□□□□ -0.64
XPC-204ENST00000455144 ABCC1P33527 1531 aa11.06□□□□□ -0.64
XPC-204ENST00000455144 KDM5CP41229 1560 aa11.06□□□□□ -0.64
XPC-204ENST00000455144 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
XPC-204ENST00000455144 ATP10AO60312 1499 aa11.06□□□□□ -0.64
XPC-204ENST00000455144 GPATCH8Q9UKJ3 1502 aaKnown RBP11.05□□□□□ -0.64
XPC-204ENST00000455144 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
XPC-204ENST00000455144 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
XPC-204ENST00000455144 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
XPC-204ENST00000455144 ZNF777Q9ULD5 760 aaPredicted RBP11.04□□□□□ -0.64
XPC-204ENST00000455144 C9orf84Q5VXU9 1444 aa11.03□□□□□ -0.64
XPC-204ENST00000455144 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
XPC-204ENST00000455144 RNF39Q9H2S5 420 aa11.03□□□□□ -0.64
XPC-204ENST00000455144 REREQ9P2R6 1566 aa11.03□□□□□ -0.64
XPC-204ENST00000455144 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
XPC-204ENST00000455144 SAMD9LQ8IVG5 1584 aa11.02□□□□□ -0.65
XPC-204ENST00000455144 YEATS2Q9ULM3 1422 aa11.01□□□□□ -0.65
XPC-204ENST00000455144 NCOA2Q15596 1464 aa11□□□□□ -0.65
XPC-204ENST00000455144 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
XPC-204ENST00000455144 SPAG9O60271 1321 aaKnown RBP11□□□□□ -0.65
XPC-204ENST00000455144 FER1L4A9Z1Z3 1794 aa11□□□□□ -0.65
XPC-204ENST00000455144 SYCP2Q9BX26 1530 aa10.99□□□□□ -0.65
XPC-204ENST00000455144 KIDINS220Q9ULH0 1771 aa10.99□□□□□ -0.65
XPC-204ENST00000455144 TRAPPC8Q9Y2L5 1435 aa10.99□□□□□ -0.65
XPC-204ENST00000455144 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
XPC-204ENST00000455144 MADDQ8WXG6 1647 aa10.98□□□□□ -0.65
XPC-204ENST00000455144 SETD1BQ9UPS6 1966 aaKnown RBP10.98□□□□□ -0.65
XPC-204ENST00000455144 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
XPC-204ENST00000455144 PTPRMP28827 1452 aa10.98□□□□□ -0.65
XPC-204ENST00000455144 AGLP35573 1532 aa10.98□□□□□ -0.65
XPC-204ENST00000455144 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
XPC-204ENST00000455144 RIMS1Q86UR5 1692 aaKnown RBP10.98□□□□□ -0.65
XPC-204ENST00000455144 ADGBQ8N7X0 1667 aa10.98□□□□□ -0.65
XPC-204ENST00000455144 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.65
XPC-204ENST00000455144 ABCA6Q8N139 1617 aa10.97□□□□□ -0.65
XPC-204ENST00000455144 ATP7AQ04656 1500 aa10.96□□□□□ -0.65
XPC-204ENST00000455144 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
XPC-204ENST00000455144 MIA2Q96PC5 1412 aa10.95□□□□□ -0.66
XPC-204ENST00000455144 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
XPC-204ENST00000455144 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
XPC-204ENST00000455144 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
XPC-204ENST00000455144 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
XPC-204ENST00000455144 MLECQ14165 292 aa10.94□□□□□ -0.66
XPC-204ENST00000455144 CAMSAP2Q08AD1 1489 aa10.93□□□□□ -0.66
XPC-204ENST00000455144 CCDC141Q6ZP82 1450 aa10.93□□□□□ -0.66
XPC-204ENST00000455144 MYOM3Q5VTT5 1437 aa10.93□□□□□ -0.66
XPC-204ENST00000455144 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
XPC-204ENST00000455144 SIGLEC1Q9BZZ2 1709 aa10.92□□□□□ -0.66
XPC-204ENST00000455144 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
XPC-204ENST00000455144 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
XPC-204ENST00000455144 A2MP01023 1474 aa10.91□□□□□ -0.66
XPC-204ENST00000455144 ZNF644Q9H582 1327 aaPredicted RBP10.9□□□□□ -0.66
XPC-204ENST00000455144 MROH2AA6NES4 1674 aa10.9□□□□□ -0.66
XPC-204ENST00000455144 KANK4Q5T7N3 995 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms