RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRAF4-206ENST00000454852 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.36
TRAF4-206ENST00000454852 TCOF1Q13428 1488 aaKnown RBP17.32■□□□□ 0.36
TRAF4-206ENST00000454852 CFAP74Q9C0B2 1584 aa17.3■□□□□ 0.36
TRAF4-206ENST00000454852 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
TRAF4-206ENST00000454852 CFDP1Q9UEE9 299 aaPredicted RBP17.29■□□□□ 0.36
TRAF4-206ENST00000454852 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
TRAF4-206ENST00000454852 NEO1Q92859 1461 aa17.29■□□□□ 0.36
TRAF4-206ENST00000454852 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
TRAF4-206ENST00000454852 FANCAO15360 1455 aa17.28■□□□□ 0.36
TRAF4-206ENST00000454852 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
TRAF4-206ENST00000454852 TEX14Q8IWB6 1497 aa17.27■□□□□ 0.36
TRAF4-206ENST00000454852 EFCAB2Q5VUJ9 269 aa17.27■□□□□ 0.36
TRAF4-206ENST00000454852 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
TRAF4-206ENST00000454852 SAMD9LQ8IVG5 1584 aa17.27■□□□□ 0.35
TRAF4-206ENST00000454852 CAMSAP2Q08AD1 1489 aa17.25■□□□□ 0.35
TRAF4-206ENST00000454852 ABCC1P33527 1531 aa17.24■□□□□ 0.35
TRAF4-206ENST00000454852 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
TRAF4-206ENST00000454852 AKNAQ7Z591 1439 aa17.22■□□□□ 0.35
TRAF4-206ENST00000454852 MBD5Q9P267 1494 aa17.22■□□□□ 0.35
TRAF4-206ENST00000454852 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
TRAF4-206ENST00000454852 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
TRAF4-206ENST00000454852 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-206ENST00000454852 ADGRL1O94910 1474 aa17.18■□□□□ 0.34
TRAF4-206ENST00000454852 TSPOAP1O95153 1857 aa17.18■□□□□ 0.34
TRAF4-206ENST00000454852 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
TRAF4-206ENST00000454852 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-206ENST00000454852 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
TRAF4-206ENST00000454852 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
TRAF4-206ENST00000454852 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
TRAF4-206ENST00000454852 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
TRAF4-206ENST00000454852 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
TRAF4-206ENST00000454852 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
TRAF4-206ENST00000454852 ABCC5O15440 1437 aa17.14■□□□□ 0.33
TRAF4-206ENST00000454852 DAPK1P53355 1430 aa17.14■□□□□ 0.33
TRAF4-206ENST00000454852 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
TRAF4-206ENST00000454852 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
TRAF4-206ENST00000454852 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
TRAF4-206ENST00000454852 KDM5CP41229 1560 aa17.13■□□□□ 0.33
TRAF4-206ENST00000454852 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
TRAF4-206ENST00000454852 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-206ENST00000454852 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
TRAF4-206ENST00000454852 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
TRAF4-206ENST00000454852 RICTORQ6R327 1708 aa17.11■□□□□ 0.33
TRAF4-206ENST00000454852 HNRNPMP52272 730 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAF4-206ENST00000454852 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
TRAF4-206ENST00000454852 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
TRAF4-206ENST00000454852 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
TRAF4-206ENST00000454852 ZMYM4Q5VZL5 1548 aa17.09■□□□□ 0.33
TRAF4-206ENST00000454852 FRMPD1Q5SYB0 1578 aa17.09■□□□□ 0.33
TRAF4-206ENST00000454852 ROCK1Q13464 1354 aa17.08■□□□□ 0.32
TRAF4-206ENST00000454852 INO80Q9ULG1 1556 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-206ENST00000454852 MLH3Q9UHC1 1453 aa17.07■□□□□ 0.32
TRAF4-206ENST00000454852 COL17A1Q9UMD9 1497 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-206ENST00000454852 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
TRAF4-206ENST00000454852 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
TRAF4-206ENST00000454852 ZFYVE16Q7Z3T8 1539 aa17.06■□□□□ 0.32
TRAF4-206ENST00000454852 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
TRAF4-206ENST00000454852 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
TRAF4-206ENST00000454852 PLXNC1O60486 1568 aa17.05■□□□□ 0.32
TRAF4-206ENST00000454852 MAGI2Q86UL8 1455 aa17.05■□□□□ 0.32
TRAF4-206ENST00000454852 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
TRAF4-206ENST00000454852 HECW2Q9P2P5 1572 aa17.03■□□□□ 0.32
TRAF4-206ENST00000454852 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
TRAF4-206ENST00000454852 NCOA1Q15788 1441 aa17.03■□□□□ 0.32
TRAF4-206ENST00000454852 KDM6BO15054 1643 aa17.03■□□□□ 0.32
TRAF4-206ENST00000454852 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.31
TRAF4-206ENST00000454852 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
TRAF4-206ENST00000454852 RAPGEF3O95398 923 aa17.01■□□□□ 0.31
TRAF4-206ENST00000454852 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
TRAF4-206ENST00000454852 HFM1A2PYH4 1435 aa17■□□□□ 0.31
TRAF4-206ENST00000454852 GCC2Q8IWJ2 1684 aa16.98■□□□□ 0.31
TRAF4-206ENST00000454852 ITGAEP38570 1179 aa16.97■□□□□ 0.31
TRAF4-206ENST00000454852 NAIPQ13075 1403 aa16.96■□□□□ 0.31
TRAF4-206ENST00000454852 REREQ9P2R6 1566 aa16.96■□□□□ 0.31
TRAF4-206ENST00000454852 ABCA6Q8N139 1617 aa16.96■□□□□ 0.3
TRAF4-206ENST00000454852 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.3
TRAF4-206ENST00000454852 DIP2CQ9Y2E4 1556 aa16.95■□□□□ 0.3
TRAF4-206ENST00000454852 ARHGEF40Q8TER5 1519 aa16.95■□□□□ 0.3
TRAF4-206ENST00000454852 KIF15Q9NS87 1388 aa16.94■□□□□ 0.3
TRAF4-206ENST00000454852 CHIC2Q9UKJ5 165 aa16.94■□□□□ 0.3
TRAF4-206ENST00000454852 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
TRAF4-206ENST00000454852 HRCP23327 699 aa16.92■□□□□ 0.3
TRAF4-206ENST00000454852 ERBINQ96RT1 1412 aa16.92■□□□□ 0.3
TRAF4-206ENST00000454852 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
TRAF4-206ENST00000454852 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
TRAF4-206ENST00000454852 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
TRAF4-206ENST00000454852 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
TRAF4-206ENST00000454852 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
TRAF4-206ENST00000454852 ATP10AO60312 1499 aa16.91■□□□□ 0.3
TRAF4-206ENST00000454852 ANKRD50Q9ULJ7 1429 aa16.9■□□□□ 0.3
TRAF4-206ENST00000454852 A2MP01023 1474 aa16.9■□□□□ 0.3
TRAF4-206ENST00000454852 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
TRAF4-206ENST00000454852 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
TRAF4-206ENST00000454852 AGLP35573 1532 aa16.88■□□□□ 0.29
TRAF4-206ENST00000454852 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
TRAF4-206ENST00000454852 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
TRAF4-206ENST00000454852 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
TRAF4-206ENST00000454852 UNC13BO14795 1591 aa16.83■□□□□ 0.28
TRAF4-206ENST00000454852 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms