RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 MS4A4AQ96JQ5 239 aa10.81□□□□□ -0.68
CDH19-202ENST00000454642 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
CDH19-202ENST00000454642 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
CDH19-202ENST00000454642 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
CDH19-202ENST00000454642 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
CDH19-202ENST00000454642 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
CDH19-202ENST00000454642 PDE4AP27815 886 aa10.77□□□□□ -0.69
CDH19-202ENST00000454642 TMEM106CQ9BVX2 250 aa10.77□□□□□ -0.69
CDH19-202ENST00000454642 BRPF1P55201 1214 aaPredicted RBP10.76□□□□□ -0.69
CDH19-202ENST00000454642 SCUBE2Q9NQ36 999 aa10.76□□□□□ -0.69
CDH19-202ENST00000454642 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
CDH19-202ENST00000454642 SEC24BO95487 1268 aa10.74□□□□□ -0.69
CDH19-202ENST00000454642 SLC24A3Q9HC58 644 aa10.74□□□□□ -0.69
CDH19-202ENST00000454642 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
CDH19-202ENST00000454642 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
CDH19-202ENST00000454642 MFSD10Q14728 455 aa10.71□□□□□ -0.69
CDH19-202ENST00000454642 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
CDH19-202ENST00000454642 IRX5P78411 483 aaPredicted RBP10.68□□□□□ -0.7
CDH19-202ENST00000454642 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
CDH19-202ENST00000454642 POTEMA6NI47 508 aa10.65□□□□□ -0.7
CDH19-202ENST00000454642 LCE2DQ5TA82 110 aaPredicted RBP10.64□□□□□ -0.71
CDH19-202ENST00000454642 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
CDH19-202ENST00000454642 ZMYND10O75800 440 aa10.63□□□□□ -0.71
CDH19-202ENST00000454642 PLCG2P16885 1265 aa10.63□□□□□ -0.71
CDH19-202ENST00000454642 CAMK2BQ13554 666 aa10.63□□□□□ -0.71
CDH19-202ENST00000454642 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
CDH19-202ENST00000454642 MLLT3P42568 568 aaPredicted RBP10.62□□□□□ -0.71
CDH19-202ENST00000454642 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
CDH19-202ENST00000454642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDH19-202ENST00000454642 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
CDH19-202ENST00000454642 RBM26Q5T8P6 1007 aaKnown RBP10.61□□□□□ -0.71
CDH19-202ENST00000454642 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
CDH19-202ENST00000454642 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
CDH19-202ENST00000454642 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
CDH19-202ENST00000454642 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
CDH19-202ENST00000454642 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CDH19-202ENST00000454642 BARGINQ6ZT62 677 aa10.56□□□□□ -0.72
CDH19-202ENST00000454642 GPIHBP1Q8IV16 184 aa10.56□□□□□ -0.72
CDH19-202ENST00000454642 FAM163AQ96GL9 167 aaPredicted RBP10.55□□□□□ -0.72
CDH19-202ENST00000454642 DSG2Q14126 1118 aa10.53□□□□□ -0.72
CDH19-202ENST00000454642 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
CDH19-202ENST00000454642 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
CDH19-202ENST00000454642 ILDR1Q86SU0 546 aaPredicted RBP10.53□□□□□ -0.72
CDH19-202ENST00000454642 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
CDH19-202ENST00000454642 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
CDH19-202ENST00000454642 PCDH10Q9P2E7 1040 aa10.53□□□□□ -0.72
CDH19-202ENST00000454642 GPBP1L1Q9HC44 474 aaPredicted RBP10.51□□□□□ -0.73
CDH19-202ENST00000454642 MICALL2Q8IY33 904 aa10.5□□□□□ -0.73
CDH19-202ENST00000454642 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
CDH19-202ENST00000454642 AK7Q96M32 723 aa10.49□□□□□ -0.73
CDH19-202ENST00000454642 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
CDH19-202ENST00000454642 PDIA6Q15084 440 aa10.46□□□□□ -0.74
CDH19-202ENST00000454642 FOXK1P85037 733 aa10.44□□□□□ -0.74
CDH19-202ENST00000454642 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
CDH19-202ENST00000454642 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.44□□□□□ -0.74
CDH19-202ENST00000454642 SPDYE16A6NNV3 312 aaPredicted RBP10.44□□□□□ -0.74
CDH19-202ENST00000454642 PLPP6Q8IY26 295 aa10.43□□□□□ -0.74
CDH19-202ENST00000454642 ST18O60284 1047 aa10.42□□□□□ -0.74
CDH19-202ENST00000454642 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
CDH19-202ENST00000454642 GRXCR2A6NFK2 248 aa10.41□□□□□ -0.74
CDH19-202ENST00000454642 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
CDH19-202ENST00000454642 C2orf72A6NCS6 295 aa10.41□□□□□ -0.74
CDH19-202ENST00000454642 ARXQ96QS3 562 aa10.41□□□□□ -0.74
CDH19-202ENST00000454642 TRIM66O15016 1216 aa10.4□□□□□ -0.74
CDH19-202ENST00000454642 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
CDH19-202ENST00000454642 PDE4DQ08499 809 aa10.39□□□□□ -0.75
CDH19-202ENST00000454642 BOLA1Q9Y3E2 137 aa10.39□□□□□ -0.75
CDH19-202ENST00000454642 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
CDH19-202ENST00000454642 G3V3G9 751 aa10.38□□□□□ -0.75
CDH19-202ENST00000454642 C3orf67Q6ZVT6 689 aa10.38□□□□□ -0.75
CDH19-202ENST00000454642 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDH19-202ENST00000454642 NUTM2FA1L443 756 aa10.37□□□□□ -0.75
CDH19-202ENST00000454642 SNPHO15079 494 aa10.37□□□□□ -0.75
CDH19-202ENST00000454642 GPR37O15354 613 aa10.36□□□□□ -0.75
CDH19-202ENST00000454642 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
CDH19-202ENST00000454642 KIF3CO14782 793 aa10.34□□□□□ -0.75
CDH19-202ENST00000454642 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
CDH19-202ENST00000454642 DDX12PQ92771 950 aa10.31□□□□□ -0.76
CDH19-202ENST00000454642 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
CDH19-202ENST00000454642 OSBPP22059 807 aa10.29□□□□□ -0.76
CDH19-202ENST00000454642 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
CDH19-202ENST00000454642 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
CDH19-202ENST00000454642 FAM117AQ9C073 453 aa10.29□□□□□ -0.76
CDH19-202ENST00000454642 NISCHQ9Y2I1 1504 aa10.28□□□□□ -0.76
CDH19-202ENST00000454642 MINK1Q8N4C8 1332 aaPredicted RBP10.28□□□□□ -0.76
CDH19-202ENST00000454642 FECHP22830 423 aa10.27□□□□□ -0.77
CDH19-202ENST00000454642 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
CDH19-202ENST00000454642 HOMEZQ8IX15 550 aa10.27□□□□□ -0.77
CDH19-202ENST00000454642 IRF6O14896 467 aa10.26□□□□□ -0.77
CDH19-202ENST00000454642 GNPATO15228 680 aa10.25□□□□□ -0.77
CDH19-202ENST00000454642 OXER1Q8TDS5 423 aa10.25□□□□□ -0.77
CDH19-202ENST00000454642 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
CDH19-202ENST00000454642 TBC1D12O60347 775 aa10.22□□□□□ -0.77
CDH19-202ENST00000454642 PRIM1P49642 420 aaKnown RBP10.22□□□□□ -0.77
CDH19-202ENST00000454642 EVI5O60447 810 aa10.22□□□□□ -0.77
CDH19-202ENST00000454642 FCHSD2O94868 740 aa10.22□□□□□ -0.77
CDH19-202ENST00000454642 HIC1Q14526 733 aa10.22□□□□□ -0.77
CDH19-202ENST00000454642 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
CDH19-202ENST00000454642 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
CDH19-202ENST00000454642 PTGER2P43116 358 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms