RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 MADDQ8WXG6 1647 aa30.29■■■□□ 2.44
UBE2D4-208ENST00000454350 PTPRMP28827 1452 aa30.29■■■□□ 2.44
UBE2D4-208ENST00000454350 YEATS2Q9ULM3 1422 aa30.29■■■□□ 2.44
UBE2D4-208ENST00000454350 ZFYVE16Q7Z3T8 1539 aa30.28■■■□□ 2.44
UBE2D4-208ENST00000454350 CDC42BPBQ9Y5S2 1711 aa30.28■■■□□ 2.44
UBE2D4-208ENST00000454350 MAGI2Q86UL8 1455 aa30.27■■■□□ 2.44
UBE2D4-208ENST00000454350 CCDC18Q5T9S5 1454 aa30.26■■■□□ 2.44
UBE2D4-208ENST00000454350 CLIP1P30622 1438 aa30.24■■■□□ 2.43
UBE2D4-208ENST00000454350 EFCAB2Q5VUJ9 269 aa30.24■■■□□ 2.43
UBE2D4-208ENST00000454350 FYCO1Q9BQS8 1478 aa30.23■■■□□ 2.43
UBE2D4-208ENST00000454350 PREX2Q70Z35 1606 aa30.2■■■□□ 2.43
UBE2D4-208ENST00000454350 ARHGAP5Q13017 1502 aa30.2■■■□□ 2.42
UBE2D4-208ENST00000454350 ARID4BQ4LE39 1312 aaPredicted RBP30.2■■■□□ 2.42
UBE2D4-208ENST00000454350 RIMS1Q86UR5 1692 aaKnown RBP30.18■■■□□ 2.42
UBE2D4-208ENST00000454350 CDC42BPAQ5VT25 1732 aa30.17■■■□□ 2.42
UBE2D4-208ENST00000454350 KDM5CP41229 1560 aa30.16■■■□□ 2.42
UBE2D4-208ENST00000454350 ZNF518AQ6AHZ1 1483 aa30.12■■■□□ 2.41
UBE2D4-208ENST00000454350 ATP10AO60312 1499 aa30.1■■■□□ 2.41
UBE2D4-208ENST00000454350 ARHGEF12Q9NZN5 1544 aa30.09■■■□□ 2.41
UBE2D4-208ENST00000454350 ABCC1P33527 1531 aa30.08■■■□□ 2.41
UBE2D4-208ENST00000454350 ITSN2Q9NZM3 1697 aa30.07■■■□□ 2.41
UBE2D4-208ENST00000454350 AFAP1Q8N556 730 aa30.07■■■□□ 2.4
UBE2D4-208ENST00000454350 FER1L4A9Z1Z3 1794 aa30.07■■■□□ 2.4
UBE2D4-208ENST00000454350 C9orf84Q5VXU9 1444 aa30.05■■■□□ 2.4
UBE2D4-208ENST00000454350 DIP2CQ9Y2E4 1556 aa30.03■■■□□ 2.4
UBE2D4-208ENST00000454350 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
UBE2D4-208ENST00000454350 LMTK3Q96Q04 1460 aa30.01■■■□□ 2.4
UBE2D4-208ENST00000454350 ABCA6Q8N139 1617 aa30.01■■■□□ 2.39
UBE2D4-208ENST00000454350 MLH3Q9UHC1 1453 aa30■■■□□ 2.39
UBE2D4-208ENST00000454350 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
UBE2D4-208ENST00000454350 GPATCH8Q9UKJ3 1502 aaKnown RBP29.98■■■□□ 2.39
UBE2D4-208ENST00000454350 SAMD9LQ8IVG5 1584 aa29.98■■■□□ 2.39
UBE2D4-208ENST00000454350 KIDINS220Q9ULH0 1771 aa29.97■■■□□ 2.39
UBE2D4-208ENST00000454350 MLECQ14165 292 aa29.96■■■□□ 2.39
UBE2D4-208ENST00000454350 CEP162Q5TB80 1403 aa29.95■■■□□ 2.38
UBE2D4-208ENST00000454350 SYCP2Q9BX26 1530 aa29.88■■■□□ 2.37
UBE2D4-208ENST00000454350 ILDR1Q86SU0 546 aaPredicted RBP29.88■■■□□ 2.37
UBE2D4-208ENST00000454350 AGLP35573 1532 aa29.86■■■□□ 2.37
UBE2D4-208ENST00000454350 MTUS2Q5JR59 1369 aa29.84■■■□□ 2.37
UBE2D4-208ENST00000454350 TIAM1Q13009 1591 aa29.83■■■□□ 2.37
UBE2D4-208ENST00000454350 EHBP1L1Q8N3D4 1523 aa29.82■■■□□ 2.36
UBE2D4-208ENST00000454350 PLPPR3Q6T4P5 718 aa29.82■■■□□ 2.36
UBE2D4-208ENST00000454350 MYT1LQ9UL68 1186 aa29.82■■■□□ 2.36
UBE2D4-208ENST00000454350 KIAA1107Q9UPP5 1409 aa29.81■■■□□ 2.36
UBE2D4-208ENST00000454350 ZNF777Q9ULD5 760 aaPredicted RBP29.81■■■□□ 2.36
UBE2D4-208ENST00000454350 CCNB3Q8WWL7 1395 aa29.8■■■□□ 2.36
UBE2D4-208ENST00000454350 HNRNPMP52272 730 aaKnown RBP eCLIP29.78■■■□□ 2.36
UBE2D4-208ENST00000454350 PREX1Q8TCU6 1659 aa29.78■■■□□ 2.36
UBE2D4-208ENST00000454350 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
UBE2D4-208ENST00000454350 SETD1BQ9UPS6 1966 aaKnown RBP29.77■■■□□ 2.36
UBE2D4-208ENST00000454350 PLEKHH2Q8IVE3 1493 aa29.77■■■□□ 2.36
UBE2D4-208ENST00000454350 CFDP1Q9UEE9 299 aaPredicted RBP29.77■■■□□ 2.36
UBE2D4-208ENST00000454350 C3P01024 1663 aa29.76■■■□□ 2.36
UBE2D4-208ENST00000454350 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
UBE2D4-208ENST00000454350 HSPA2P54652 639 aa29.76■■■□□ 2.35
UBE2D4-208ENST00000454350 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
UBE2D4-208ENST00000454350 ATP7AQ04656 1500 aa29.74■■■□□ 2.35
UBE2D4-208ENST00000454350 SPAG9O60271 1321 aaKnown RBP29.71■■■□□ 2.35
UBE2D4-208ENST00000454350 SUPT6HQ7KZ85 1726 aaKnown RBP29.71■■■□□ 2.35
UBE2D4-208ENST00000454350 ZNF644Q9H582 1327 aaPredicted RBP29.7■■■□□ 2.34
UBE2D4-208ENST00000454350 PLXNC1O60486 1568 aa29.69■■■□□ 2.34
UBE2D4-208ENST00000454350 MBD5Q9P267 1494 aa29.69■■■□□ 2.34
UBE2D4-208ENST00000454350 NCOA2Q15596 1464 aa29.65■■■□□ 2.34
UBE2D4-208ENST00000454350 VPS8Q8N3P4 1428 aa29.63■■■□□ 2.33
UBE2D4-208ENST00000454350 MROH2AA6NES4 1674 aa29.63■■■□□ 2.33
UBE2D4-208ENST00000454350 ADGBQ8N7X0 1667 aa29.63■■■□□ 2.33
UBE2D4-208ENST00000454350 STRCQ7RTU9 1775 aa29.62■■■□□ 2.33
UBE2D4-208ENST00000454350 A2MP01023 1474 aa29.61■■■□□ 2.33
UBE2D4-208ENST00000454350 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
UBE2D4-208ENST00000454350 UHRF1BP1Q6BDS2 1440 aa29.56■■■□□ 2.32
UBE2D4-208ENST00000454350 LRRC9Q6ZRR7 1453 aa29.55■■■□□ 2.32
UBE2D4-208ENST00000454350 CLTCQ00610 1675 aaKnown RBP29.55■■■□□ 2.32
UBE2D4-208ENST00000454350 CAMSAP2Q08AD1 1489 aa29.55■■■□□ 2.32
UBE2D4-208ENST00000454350 RTEL1-TNFRSF6BF6WH68 1400 aa29.54■■■□□ 2.32
UBE2D4-208ENST00000454350 MAP3K1Q13233 1512 aa29.51■■■□□ 2.32
UBE2D4-208ENST00000454350 ESF1Q9H501 851 aaKnown RBP29.51■■■□□ 2.31
UBE2D4-208ENST00000454350 FBXO41Q8TF61 875 aa29.5■■■□□ 2.31
UBE2D4-208ENST00000454350 CCDC141Q6ZP82 1450 aa29.49■■■□□ 2.31
UBE2D4-208ENST00000454350 ZMYM3Q14202 1370 aa29.49■■■□□ 2.31
UBE2D4-208ENST00000454350 ARHGEF5Q12774 1597 aa29.47■■■□□ 2.31
UBE2D4-208ENST00000454350 NPATQ14207 1427 aa29.46■■■□□ 2.31
UBE2D4-208ENST00000454350 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.31
UBE2D4-208ENST00000454350 DHX29Q7Z478 1369 aaKnown RBP29.43■■■□□ 2.3
UBE2D4-208ENST00000454350 GGT6Q6P531 493 aa29.41■■■□□ 2.3
UBE2D4-208ENST00000454350 RSPH4AQ5TD94 716 aa29.4■■■□□ 2.3
UBE2D4-208ENST00000454350 PTPRKQ15262 1439 aa29.38■■■□□ 2.29
UBE2D4-208ENST00000454350 PPP6R1Q9UPN7 881 aa29.38■■■□□ 2.29
UBE2D4-208ENST00000454350 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
UBE2D4-208ENST00000454350 MYO3AQ8NEV4 1616 aa29.36■■■□□ 2.29
UBE2D4-208ENST00000454350 NCOA1Q15788 1441 aa29.34■■■□□ 2.29
UBE2D4-208ENST00000454350 MAST1Q9Y2H9 1570 aa29.34■■■□□ 2.29
UBE2D4-208ENST00000454350 PTPRTO14522 1441 aa29.33■■■□□ 2.29
UBE2D4-208ENST00000454350 MYOM3Q5VTT5 1437 aa29.32■■■□□ 2.28
UBE2D4-208ENST00000454350 CERKQ8TCT0 537 aa29.32■■■□□ 2.28
UBE2D4-208ENST00000454350 DMRT2Q9Y5R5 561 aa29.32■■■□□ 2.28
UBE2D4-208ENST00000454350 CAMSAP1Q5T5Y3 1602 aa29.31■■■□□ 2.28
UBE2D4-208ENST00000454350 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
UBE2D4-208ENST00000454350 CEP170BQ9Y4F5 1589 aaPredicted RBP29.28■■■□□ 2.28
UBE2D4-208ENST00000454350 KIF3BO15066 747 aa29.28■■■□□ 2.28
UBE2D4-208ENST00000454350 FAM135AQ9P2D6 1515 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms