RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 ZMYM4Q5VZL5 1548 aa26.55■■□□□ 1.84
NCKIPSD-208ENST00000454134 POGZQ7Z3K3 1410 aa26.54■■□□□ 1.84
NCKIPSD-208ENST00000454134 YEATS2Q9ULM3 1422 aa26.52■■□□□ 1.84
NCKIPSD-208ENST00000454134 CEP162Q5TB80 1403 aa26.51■■□□□ 1.83
NCKIPSD-208ENST00000454134 ZFYVE16Q7Z3T8 1539 aa26.5■■□□□ 1.83
NCKIPSD-208ENST00000454134 ADAMTSL3P82987 1691 aa26.49■■□□□ 1.83
NCKIPSD-208ENST00000454134 CDC42BPBQ9Y5S2 1711 aa26.48■■□□□ 1.83
NCKIPSD-208ENST00000454134 BCORL1Q5H9F3 1711 aa26.48■■□□□ 1.83
NCKIPSD-208ENST00000454134 MAGI2Q86UL8 1455 aa26.47■■□□□ 1.83
NCKIPSD-208ENST00000454134 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
NCKIPSD-208ENST00000454134 PREX2Q70Z35 1606 aa26.46■■□□□ 1.83
NCKIPSD-208ENST00000454134 SIGLEC1Q9BZZ2 1709 aa26.43■■□□□ 1.82
NCKIPSD-208ENST00000454134 AFAP1Q8N556 730 aa26.43■■□□□ 1.82
NCKIPSD-208ENST00000454134 MADDQ8WXG6 1647 aa26.41■■□□□ 1.82
NCKIPSD-208ENST00000454134 CDC42BPAQ5VT25 1732 aa26.41■■□□□ 1.82
NCKIPSD-208ENST00000454134 PTPRMP28827 1452 aa26.41■■□□□ 1.82
NCKIPSD-208ENST00000454134 ZNF518AQ6AHZ1 1483 aa26.41■■□□□ 1.82
NCKIPSD-208ENST00000454134 HECW2Q9P2P5 1572 aa26.41■■□□□ 1.82
NCKIPSD-208ENST00000454134 ARHGEF12Q9NZN5 1544 aa26.37■■□□□ 1.81
NCKIPSD-208ENST00000454134 MTUS2Q5JR59 1369 aa26.36■■□□□ 1.81
NCKIPSD-208ENST00000454134 ABCC1P33527 1531 aa26.36■■□□□ 1.81
NCKIPSD-208ENST00000454134 MYT1LQ9UL68 1186 aa26.36■■□□□ 1.81
NCKIPSD-208ENST00000454134 KDM5CP41229 1560 aa26.36■■□□□ 1.81
NCKIPSD-208ENST00000454134 ATP10AO60312 1499 aa26.36■■□□□ 1.81
NCKIPSD-208ENST00000454134 MLECQ14165 292 aa26.35■■□□□ 1.81
NCKIPSD-208ENST00000454134 GPATCH8Q9UKJ3 1502 aaKnown RBP26.34■■□□□ 1.81
NCKIPSD-208ENST00000454134 TRAPPC8Q9Y2L5 1435 aa26.34■■□□□ 1.81
NCKIPSD-208ENST00000454134 ZNF777Q9ULD5 760 aaPredicted RBP26.34■■□□□ 1.81
NCKIPSD-208ENST00000454134 RIMS1Q86UR5 1692 aaKnown RBP26.33■■□□□ 1.81
NCKIPSD-208ENST00000454134 C9orf84Q5VXU9 1444 aa26.32■■□□□ 1.8
NCKIPSD-208ENST00000454134 ITSN2Q9NZM3 1697 aa26.32■■□□□ 1.8
NCKIPSD-208ENST00000454134 SAMD9LQ8IVG5 1584 aa26.29■■□□□ 1.8
NCKIPSD-208ENST00000454134 CCNB3Q8WWL7 1395 aa26.29■■□□□ 1.8
NCKIPSD-208ENST00000454134 PLPPR3Q6T4P5 718 aa26.27■■□□□ 1.8
NCKIPSD-208ENST00000454134 MLH3Q9UHC1 1453 aa26.27■■□□□ 1.8
NCKIPSD-208ENST00000454134 DIP2CQ9Y2E4 1556 aa26.27■■□□□ 1.8
NCKIPSD-208ENST00000454134 EHBP1L1Q8N3D4 1523 aa26.26■■□□□ 1.79
NCKIPSD-208ENST00000454134 CFDP1Q9UEE9 299 aaPredicted RBP26.26■■□□□ 1.79
NCKIPSD-208ENST00000454134 ABCA6Q8N139 1617 aa26.25■■□□□ 1.79
NCKIPSD-208ENST00000454134 SYCP2Q9BX26 1530 aa26.24■■□□□ 1.79
NCKIPSD-208ENST00000454134 HNRNPMP52272 730 aaKnown RBP eCLIP26.24■■□□□ 1.79
NCKIPSD-208ENST00000454134 FER1L4A9Z1Z3 1794 aa26.22■■□□□ 1.79
NCKIPSD-208ENST00000454134 TIAM1Q13009 1591 aa26.21■■□□□ 1.79
NCKIPSD-208ENST00000454134 VPS8Q8N3P4 1428 aa26.2■■□□□ 1.78
NCKIPSD-208ENST00000454134 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
NCKIPSD-208ENST00000454134 REREQ9P2R6 1566 aa26.17■■□□□ 1.78
NCKIPSD-208ENST00000454134 ZNF644Q9H582 1327 aaPredicted RBP26.16■■□□□ 1.78
NCKIPSD-208ENST00000454134 KIAA1107Q9UPP5 1409 aa26.16■■□□□ 1.78
NCKIPSD-208ENST00000454134 PLEKHH2Q8IVE3 1493 aa26.16■■□□□ 1.78
NCKIPSD-208ENST00000454134 SPAG9O60271 1321 aaKnown RBP26.15■■□□□ 1.78
NCKIPSD-208ENST00000454134 NCOA2Q15596 1464 aa26.12■■□□□ 1.77
NCKIPSD-208ENST00000454134 LMTK3Q96Q04 1460 aa26.12■■□□□ 1.77
NCKIPSD-208ENST00000454134 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
NCKIPSD-208ENST00000454134 AGLP35573 1532 aa26.1■■□□□ 1.77
NCKIPSD-208ENST00000454134 CEBPAP49715 358 aaPredicted RBP26.09■■□□□ 1.77
NCKIPSD-208ENST00000454134 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
NCKIPSD-208ENST00000454134 INO80Q9ULG1 1556 aaPredicted RBP26.07■■□□□ 1.76
NCKIPSD-208ENST00000454134 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
NCKIPSD-208ENST00000454134 MBD5Q9P267 1494 aa26.05■■□□□ 1.76
NCKIPSD-208ENST00000454134 HSPA2P54652 639 aa26.04■■□□□ 1.76
NCKIPSD-208ENST00000454134 KANK4Q5T7N3 995 aaPredicted RBP26.03■■□□□ 1.76
NCKIPSD-208ENST00000454134 CAMSAP2Q08AD1 1489 aa26■■□□□ 1.75
NCKIPSD-208ENST00000454134 ESF1Q9H501 851 aaKnown RBP26■■□□□ 1.75
NCKIPSD-208ENST00000454134 MAP3K1Q13233 1512 aa25.99■■□□□ 1.75
NCKIPSD-208ENST00000454134 A2MP01023 1474 aa25.99■■□□□ 1.75
NCKIPSD-208ENST00000454134 PLXNC1O60486 1568 aa25.96■■□□□ 1.75
NCKIPSD-208ENST00000454134 C3P01024 1663 aa25.96■■□□□ 1.75
NCKIPSD-208ENST00000454134 CCDC141Q6ZP82 1450 aa25.93■■□□□ 1.74
NCKIPSD-208ENST00000454134 ADGBQ8N7X0 1667 aa25.93■■□□□ 1.74
NCKIPSD-208ENST00000454134 PREX1Q8TCU6 1659 aa25.93■■□□□ 1.74
NCKIPSD-208ENST00000454134 RTEL1-TNFRSF6BF6WH68 1400 aa25.92■■□□□ 1.74
NCKIPSD-208ENST00000454134 CNTLNQ9NXG0 1405 aa25.91■■□□□ 1.74
NCKIPSD-208ENST00000454134 GGT6Q6P531 493 aa25.89■■□□□ 1.74
NCKIPSD-208ENST00000454134 ILDR1Q86SU0 546 aaPredicted RBP25.89■■□□□ 1.74
NCKIPSD-208ENST00000454134 APLP2Q06481 763 aa25.88■■□□□ 1.73
NCKIPSD-208ENST00000454134 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
NCKIPSD-208ENST00000454134 UHRF1BP1Q6BDS2 1440 aa25.87■■□□□ 1.73
NCKIPSD-208ENST00000454134 ARHGEF5Q12774 1597 aa25.86■■□□□ 1.73
NCKIPSD-208ENST00000454134 MYOM3Q5VTT5 1437 aa25.86■■□□□ 1.73
NCKIPSD-208ENST00000454134 ZMYM3Q14202 1370 aa25.84■■□□□ 1.73
NCKIPSD-208ENST00000454134 DHX29Q7Z478 1369 aaKnown RBP25.84■■□□□ 1.73
NCKIPSD-208ENST00000454134 CLTCQ00610 1675 aaKnown RBP25.84■■□□□ 1.73
NCKIPSD-208ENST00000454134 SETD1BQ9UPS6 1966 aaKnown RBP25.84■■□□□ 1.73
NCKIPSD-208ENST00000454134 MROH2AA6NES4 1674 aa25.83■■□□□ 1.73
NCKIPSD-208ENST00000454134 TSPY4P0CV99 314 aa25.82■■□□□ 1.72
NCKIPSD-208ENST00000454134 TSPY10P0CW01 314 aa25.82■■□□□ 1.72
NCKIPSD-208ENST00000454134 MIA2Q96PC5 1412 aa25.81■■□□□ 1.72
NCKIPSD-208ENST00000454134 KIF3BO15066 747 aa25.79■■□□□ 1.72
NCKIPSD-208ENST00000454134 NPATQ14207 1427 aa25.76■■□□□ 1.71
NCKIPSD-208ENST00000454134 PPP6R1Q9UPN7 881 aa25.75■■□□□ 1.71
NCKIPSD-208ENST00000454134 MAST1Q9Y2H9 1570 aa25.73■■□□□ 1.71
NCKIPSD-208ENST00000454134 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
NCKIPSD-208ENST00000454134 PTPRKQ15262 1439 aa25.71■■□□□ 1.71
NCKIPSD-208ENST00000454134 PTPN23Q9H3S7 1636 aa25.7■■□□□ 1.71
NCKIPSD-208ENST00000454134 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
NCKIPSD-208ENST00000454134 WASHC2CQ9Y4E1 1318 aa25.65■■□□□ 1.7
NCKIPSD-208ENST00000454134 ABCC5O15440 1437 aa25.65■■□□□ 1.7
NCKIPSD-208ENST00000454134 KDM5DQ9BY66 1539 aa25.65■■□□□ 1.7
NCKIPSD-208ENST00000454134 MYO3AQ8NEV4 1616 aa25.64■■□□□ 1.7
NCKIPSD-208ENST00000454134 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms