RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TRIM66O15016 1216 aa8.16□□□□□ -1.1
HMGN3P1-201ENST00000453847 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
HMGN3P1-201ENST00000453847 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
HMGN3P1-201ENST00000453847 GPR37O15354 613 aa8.15□□□□□ -1.1
HMGN3P1-201ENST00000453847 KDM4CQ9H3R0 1056 aa8.15□□□□□ -1.1
HMGN3P1-201ENST00000453847 DPYSL4O14531 572 aa8.14□□□□□ -1.11
HMGN3P1-201ENST00000453847 CD44P16070 742 aaKnown RBP8.14□□□□□ -1.11
HMGN3P1-201ENST00000453847 MS4A3Q96HJ5 214 aa8.14□□□□□ -1.11
HMGN3P1-201ENST00000453847 PDE4DQ08499 809 aa8.13□□□□□ -1.11
HMGN3P1-201ENST00000453847 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
HMGN3P1-201ENST00000453847 KRI1Q8N9T8 703 aaKnown RBP8.13□□□□□ -1.11
HMGN3P1-201ENST00000453847 DSG2Q14126 1118 aa8.12□□□□□ -1.11
HMGN3P1-201ENST00000453847 DPY19L2Q6NUT2 758 aa8.12□□□□□ -1.11
HMGN3P1-201ENST00000453847 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
HMGN3P1-201ENST00000453847 PDIA6Q15084 440 aa8.11□□□□□ -1.11
HMGN3P1-201ENST00000453847 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
HMGN3P1-201ENST00000453847 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
HMGN3P1-201ENST00000453847 TTLL13PA6NNM8 815 aa8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 PLEKHG3A1L390 1219 aa8.06□□□□□ -1.12
HMGN3P1-201ENST00000453847 BMP2KQ9NSY1 1161 aaPredicted RBP8.06□□□□□ -1.12
HMGN3P1-201ENST00000453847 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
HMGN3P1-201ENST00000453847 TIE1P35590 1138 aa8.05□□□□□ -1.12
HMGN3P1-201ENST00000453847 FOXK1P85037 733 aa8.05□□□□□ -1.12
HMGN3P1-201ENST00000453847 MICALL2Q8IY33 904 aa8.04□□□□□ -1.12
HMGN3P1-201ENST00000453847 C19orf67A6NJJ6 358 aa8.03□□□□□ -1.12
HMGN3P1-201ENST00000453847 KIF3CO14782 793 aa8.02□□□□□ -1.13
HMGN3P1-201ENST00000453847 PDCD7Q8N8D1 485 aaKnown RBP8.02□□□□□ -1.13
HMGN3P1-201ENST00000453847 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
HMGN3P1-201ENST00000453847 IRF6O14896 467 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 OSBPP22059 807 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 FECHP22830 423 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 PLPP6Q8IY26 295 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 CCDC102AQ96A19 550 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 TMEM121BQ9BXQ6 578 aaPredicted RBP8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
HMGN3P1-201ENST00000453847 TRIM35Q9UPQ4 493 aa8□□□□□ -1.13
HMGN3P1-201ENST00000453847 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 PRIM1P49642 420 aaKnown RBP7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 MAP2K5Q13163 448 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 AMHR2Q16671 573 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 PARP9Q8IXQ6 854 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 RSPH6AQ9H0K4 717 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
HMGN3P1-201ENST00000453847 TMC2Q8TDI7 906 aa7.98□□□□□ -1.13
HMGN3P1-201ENST00000453847 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
HMGN3P1-201ENST00000453847 GALR2O43603 387 aaPredicted RBP7.97□□□□□ -1.13
HMGN3P1-201ENST00000453847 GNPATO15228 680 aa7.95□□□□□ -1.14
HMGN3P1-201ENST00000453847 IRX5P78411 483 aaPredicted RBP7.95□□□□□ -1.14
HMGN3P1-201ENST00000453847 TMEM92Q6UXU6 159 aa7.95□□□□□ -1.14
HMGN3P1-201ENST00000453847 ONECUT3O60422 494 aaPredicted RBP7.94□□□□□ -1.14
HMGN3P1-201ENST00000453847 PTGER2P43116 358 aa7.94□□□□□ -1.14
HMGN3P1-201ENST00000453847 MAP3K9P80192 1104 aa7.94□□□□□ -1.14
HMGN3P1-201ENST00000453847 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 OXER1Q8TDS5 423 aa7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 DDRGK1Q96HY6 314 aa7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 BOLA1Q9Y3E2 137 aa7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 REPIN1Q9BWE0 567 aaKnown RBP7.92□□□□□ -1.14
HMGN3P1-201ENST00000453847 HIC1Q14526 733 aa7.91□□□□□ -1.14
HMGN3P1-201ENST00000453847 DDX12PQ92771 950 aa7.91□□□□□ -1.14
HMGN3P1-201ENST00000453847 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGN3P1-201ENST00000453847 FCHSD2O94868 740 aa7.9□□□□□ -1.14
HMGN3P1-201ENST00000453847 MS4A1P11836 297 aa7.9□□□□□ -1.14
HMGN3P1-201ENST00000453847 HRCP23327 699 aa7.9□□□□□ -1.14
HMGN3P1-201ENST00000453847 ARID3CA6NKF2 412 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 TRIM26Q12899 539 aaPredicted RBP7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 PTGDRQ13258 359 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 OCEL1Q9H607 264 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 ATMINO43313 823 aaPredicted RBP7.88□□□□□ -1.15
HMGN3P1-201ENST00000453847 PODXL2Q9NZ53 605 aa7.88□□□□□ -1.15
HMGN3P1-201ENST00000453847 EVX2Q03828 476 aa7.87□□□□□ -1.15
HMGN3P1-201ENST00000453847 ARID3AQ99856 593 aa7.87□□□□□ -1.15
HMGN3P1-201ENST00000453847 TMUB1Q9BVT8 246 aa7.87□□□□□ -1.15
HMGN3P1-201ENST00000453847 NPDC1Q9NQX5 325 aaPredicted RBP7.86□□□□□ -1.15
HMGN3P1-201ENST00000453847 APBB1O00213 710 aa7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 EVI5O60447 810 aa7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 FLIIQ13045 1269 aa7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 GIGYF2Q6Y7W6 1299 aaKnown RBP7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 ASTLQ6HA08 431 aaPredicted RBP7.84□□□□□ -1.15
HMGN3P1-201ENST00000453847 PHOX2BQ99453 314 aa7.84□□□□□ -1.15
HMGN3P1-201ENST00000453847 TTLL12Q14166 644 aaPredicted RBP7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 IER5LQ5T953 404 aa7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 CLUAP1Q96AJ1 413 aa7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 ANO8Q9HCE9 1232 aaPredicted RBP7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 A6NJR5 290 aa7.82□□□□□ -1.16
HMGN3P1-201ENST00000453847 CDHR5Q9HBB8 845 aa7.82□□□□□ -1.16
HMGN3P1-201ENST00000453847 TRAK2O60296 914 aa7.8□□□□□ -1.16
HMGN3P1-201ENST00000453847 COLQQ9Y215 455 aaPredicted RBP7.8□□□□□ -1.16
HMGN3P1-201ENST00000453847 TBC1D12O60347 775 aa7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 PELP1Q8IZL8 1130 aaKnown RBP7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 PTCD2Q8WV60 388 aaKnown RBP7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
HMGN3P1-201ENST00000453847 POTEFA5A3E0 1075 aa7.77□□□□□ -1.17
HMGN3P1-201ENST00000453847 PLCG2P16885 1265 aa7.77□□□□□ -1.17
HMGN3P1-201ENST00000453847 MCM6Q14566 821 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms