RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TRIM66O15016 1216 aa8.16□□□□□ -1.1
HMGN3P1-201ENST00000453847 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
HMGN3P1-201ENST00000453847 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
HMGN3P1-201ENST00000453847 GPR37O15354 613 aa8.15□□□□□ -1.1
HMGN3P1-201ENST00000453847 KDM4CQ9H3R0 1056 aa8.15□□□□□ -1.1
HMGN3P1-201ENST00000453847 DPYSL4O14531 572 aa8.14□□□□□ -1.11
HMGN3P1-201ENST00000453847 CD44P16070 742 aaKnown RBP8.14□□□□□ -1.11
HMGN3P1-201ENST00000453847 MS4A3Q96HJ5 214 aa8.14□□□□□ -1.11
HMGN3P1-201ENST00000453847 PDE4DQ08499 809 aa8.13□□□□□ -1.11
HMGN3P1-201ENST00000453847 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
HMGN3P1-201ENST00000453847 KRI1Q8N9T8 703 aaKnown RBP8.13□□□□□ -1.11
HMGN3P1-201ENST00000453847 DSG2Q14126 1118 aa8.12□□□□□ -1.11
HMGN3P1-201ENST00000453847 DPY19L2Q6NUT2 758 aa8.12□□□□□ -1.11
HMGN3P1-201ENST00000453847 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
HMGN3P1-201ENST00000453847 PDIA6Q15084 440 aa8.11□□□□□ -1.11
HMGN3P1-201ENST00000453847 GOLGA2Q08379 1002 aa8.1□□□□□ -1.11
HMGN3P1-201ENST00000453847 ZMYND15Q9H091 742 aa8.09□□□□□ -1.11
HMGN3P1-201ENST00000453847 TTLL13PA6NNM8 815 aa8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGN3P1-201ENST00000453847 PLEKHG3A1L390 1219 aa8.06□□□□□ -1.12
HMGN3P1-201ENST00000453847 BMP2KQ9NSY1 1161 aaPredicted RBP8.06□□□□□ -1.12
HMGN3P1-201ENST00000453847 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
HMGN3P1-201ENST00000453847 TIE1P35590 1138 aa8.05□□□□□ -1.12
HMGN3P1-201ENST00000453847 FOXK1P85037 733 aa8.05□□□□□ -1.12
HMGN3P1-201ENST00000453847 MICALL2Q8IY33 904 aa8.04□□□□□ -1.12
HMGN3P1-201ENST00000453847 C19orf67A6NJJ6 358 aa8.03□□□□□ -1.12
HMGN3P1-201ENST00000453847 KIF3CO14782 793 aa8.02□□□□□ -1.13
HMGN3P1-201ENST00000453847 PDCD7Q8N8D1 485 aaKnown RBP8.02□□□□□ -1.13
HMGN3P1-201ENST00000453847 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
HMGN3P1-201ENST00000453847 IRF6O14896 467 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 OSBPP22059 807 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 FECHP22830 423 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 PLPP6Q8IY26 295 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 CCDC102AQ96A19 550 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 TMEM121BQ9BXQ6 578 aaPredicted RBP8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
HMGN3P1-201ENST00000453847 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
HMGN3P1-201ENST00000453847 TRIM35Q9UPQ4 493 aa8□□□□□ -1.13
HMGN3P1-201ENST00000453847 C2orf72A6NCS6 295 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 PRIM1P49642 420 aaKnown RBP7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 MAP2K5Q13163 448 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 AMHR2Q16671 573 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 PARP9Q8IXQ6 854 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 RSPH6AQ9H0K4 717 aa7.99□□□□□ -1.13
HMGN3P1-201ENST00000453847 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
HMGN3P1-201ENST00000453847 TMC2Q8TDI7 906 aa7.98□□□□□ -1.13
HMGN3P1-201ENST00000453847 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
HMGN3P1-201ENST00000453847 GALR2O43603 387 aaPredicted RBP7.97□□□□□ -1.13
HMGN3P1-201ENST00000453847 GNPATO15228 680 aa7.95□□□□□ -1.14
HMGN3P1-201ENST00000453847 IRX5P78411 483 aaPredicted RBP7.95□□□□□ -1.14
HMGN3P1-201ENST00000453847 TMEM92Q6UXU6 159 aa7.95□□□□□ -1.14
HMGN3P1-201ENST00000453847 ONECUT3O60422 494 aaPredicted RBP7.94□□□□□ -1.14
HMGN3P1-201ENST00000453847 PTGER2P43116 358 aa7.94□□□□□ -1.14
HMGN3P1-201ENST00000453847 MAP3K9P80192 1104 aa7.94□□□□□ -1.14
HMGN3P1-201ENST00000453847 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 OXER1Q8TDS5 423 aa7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 DDRGK1Q96HY6 314 aa7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 BOLA1Q9Y3E2 137 aa7.93□□□□□ -1.14
HMGN3P1-201ENST00000453847 REPIN1Q9BWE0 567 aaKnown RBP7.92□□□□□ -1.14
HMGN3P1-201ENST00000453847 HIC1Q14526 733 aa7.91□□□□□ -1.14
HMGN3P1-201ENST00000453847 DDX12PQ92771 950 aa7.91□□□□□ -1.14
HMGN3P1-201ENST00000453847 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGN3P1-201ENST00000453847 FCHSD2O94868 740 aa7.9□□□□□ -1.14
HMGN3P1-201ENST00000453847 MS4A1P11836 297 aa7.9□□□□□ -1.14
HMGN3P1-201ENST00000453847 HRCP23327 699 aa7.9□□□□□ -1.14
HMGN3P1-201ENST00000453847 ARID3CA6NKF2 412 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 TRIM26Q12899 539 aaPredicted RBP7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 PTGDRQ13258 359 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 OCEL1Q9H607 264 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
HMGN3P1-201ENST00000453847 ATMINO43313 823 aaPredicted RBP7.88□□□□□ -1.15
HMGN3P1-201ENST00000453847 PODXL2Q9NZ53 605 aa7.88□□□□□ -1.15
HMGN3P1-201ENST00000453847 EVX2Q03828 476 aa7.87□□□□□ -1.15
HMGN3P1-201ENST00000453847 ARID3AQ99856 593 aa7.87□□□□□ -1.15
HMGN3P1-201ENST00000453847 TMUB1Q9BVT8 246 aa7.87□□□□□ -1.15
HMGN3P1-201ENST00000453847 NPDC1Q9NQX5 325 aaPredicted RBP7.86□□□□□ -1.15
HMGN3P1-201ENST00000453847 APBB1O00213 710 aa7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 EVI5O60447 810 aa7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 FLIIQ13045 1269 aa7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 GIGYF2Q6Y7W6 1299 aaKnown RBP7.85□□□□□ -1.15
HMGN3P1-201ENST00000453847 ASTLQ6HA08 431 aaPredicted RBP7.84□□□□□ -1.15
HMGN3P1-201ENST00000453847 PHOX2BQ99453 314 aa7.84□□□□□ -1.15
HMGN3P1-201ENST00000453847 TTLL12Q14166 644 aaPredicted RBP7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 IER5LQ5T953 404 aa7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 CLUAP1Q96AJ1 413 aa7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 ANO8Q9HCE9 1232 aaPredicted RBP7.83□□□□□ -1.16
HMGN3P1-201ENST00000453847 A6NJR5 290 aa7.82□□□□□ -1.16
HMGN3P1-201ENST00000453847 CDHR5Q9HBB8 845 aa7.82□□□□□ -1.16
HMGN3P1-201ENST00000453847 TRAK2O60296 914 aa7.8□□□□□ -1.16
HMGN3P1-201ENST00000453847 COLQQ9Y215 455 aaPredicted RBP7.8□□□□□ -1.16
HMGN3P1-201ENST00000453847 TBC1D12O60347 775 aa7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 PELP1Q8IZL8 1130 aaKnown RBP7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 PTCD2Q8WV60 388 aaKnown RBP7.79□□□□□ -1.16
HMGN3P1-201ENST00000453847 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
HMGN3P1-201ENST00000453847 POTEFA5A3E0 1075 aa7.77□□□□□ -1.17
HMGN3P1-201ENST00000453847 PLCG2P16885 1265 aa7.77□□□□□ -1.17
HMGN3P1-201ENST00000453847 MCM6Q14566 821 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms