RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 MFSD10Q14728 455 aa8.72□□□□□ -1.01
TRGVB-201ENST00000453257 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
TRGVB-201ENST00000453257 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
TRGVB-201ENST00000453257 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
TRGVB-201ENST00000453257 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
TRGVB-201ENST00000453257 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
TRGVB-201ENST00000453257 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
TRGVB-201ENST00000453257 SEMA3EO15041 775 aa8.68□□□□□ -1.02
TRGVB-201ENST00000453257 L3MBTL3Q96JM7 780 aaPredicted RBP8.67□□□□□ -1.02
TRGVB-201ENST00000453257 DSG2Q14126 1118 aa8.65□□□□□ -1.02
TRGVB-201ENST00000453257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRGVB-201ENST00000453257 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
TRGVB-201ENST00000453257 PELP1Q8IZL8 1130 aaKnown RBP8.64□□□□□ -1.03
TRGVB-201ENST00000453257 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
TRGVB-201ENST00000453257 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
TRGVB-201ENST00000453257 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
TRGVB-201ENST00000453257 DPYSL4O14531 572 aa8.62□□□□□ -1.03
TRGVB-201ENST00000453257 COLQQ9Y215 455 aaPredicted RBP8.62□□□□□ -1.03
TRGVB-201ENST00000453257 TESPA1A2RU30 521 aaPredicted RBP8.61□□□□□ -1.03
TRGVB-201ENST00000453257 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
TRGVB-201ENST00000453257 TMEM121BQ9BXQ6 578 aaPredicted RBP8.61□□□□□ -1.03
TRGVB-201ENST00000453257 METRNQ9UJH8 293 aa8.61□□□□□ -1.03
TRGVB-201ENST00000453257 C7P10643 843 aa8.6□□□□□ -1.03
TRGVB-201ENST00000453257 FOXK1P85037 733 aa8.6□□□□□ -1.03
TRGVB-201ENST00000453257 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
TRGVB-201ENST00000453257 EMILIN3Q9NT22 766 aa8.58□□□□□ -1.04
TRGVB-201ENST00000453257 ARIH1Q9Y4X5 557 aaPredicted RBP8.58□□□□□ -1.04
TRGVB-201ENST00000453257 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRGVB-201ENST00000453257 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
TRGVB-201ENST00000453257 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
TRGVB-201ENST00000453257 KIF3CO14782 793 aa8.54□□□□□ -1.04
TRGVB-201ENST00000453257 MLLT3P42568 568 aaPredicted RBP8.54□□□□□ -1.04
TRGVB-201ENST00000453257 LHX8Q68G74 356 aa8.53□□□□□ -1.04
TRGVB-201ENST00000453257 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
TRGVB-201ENST00000453257 ZC3H15Q8WU90 426 aaKnown RBP8.53□□□□□ -1.04
TRGVB-201ENST00000453257 POTEFA5A3E0 1075 aa8.52□□□□□ -1.05
TRGVB-201ENST00000453257 POTEIP0CG38 1075 aa8.52□□□□□ -1.05
TRGVB-201ENST00000453257 PDIA6Q15084 440 aa8.52□□□□□ -1.05
TRGVB-201ENST00000453257 GRXCR2A6NFK2 248 aa8.5□□□□□ -1.05
TRGVB-201ENST00000453257 RBM26Q5T8P6 1007 aaKnown RBP8.5□□□□□ -1.05
TRGVB-201ENST00000453257 GPIHBP1Q8IV16 184 aa8.5□□□□□ -1.05
TRGVB-201ENST00000453257 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.5□□□□□ -1.05
TRGVB-201ENST00000453257 ZNF316A6NFI3 1004 aaPredicted RBP8.48□□□□□ -1.05
TRGVB-201ENST00000453257 TBC1D12O60347 775 aa8.48□□□□□ -1.05
TRGVB-201ENST00000453257 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
TRGVB-201ENST00000453257 KRI1Q8N9T8 703 aaKnown RBP8.45□□□□□ -1.06
TRGVB-201ENST00000453257 OXER1Q8TDS5 423 aa8.45□□□□□ -1.06
TRGVB-201ENST00000453257 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
TRGVB-201ENST00000453257 DDX12PQ92771 950 aa8.44□□□□□ -1.06
TRGVB-201ENST00000453257 EVI5O60447 810 aa8.43□□□□□ -1.06
TRGVB-201ENST00000453257 ZMYND10O75800 440 aa8.41□□□□□ -1.06
TRGVB-201ENST00000453257 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
TRGVB-201ENST00000453257 NEUROD2Q15784 382 aa8.4□□□□□ -1.06
TRGVB-201ENST00000453257 BARGINQ6ZT62 677 aa8.39□□□□□ -1.07
TRGVB-201ENST00000453257 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
TRGVB-201ENST00000453257 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
TRGVB-201ENST00000453257 SLC34A2O95436 690 aa8.35□□□□□ -1.07
TRGVB-201ENST00000453257 OSBPP22059 807 aa8.35□□□□□ -1.07
TRGVB-201ENST00000453257 PTGER2P43116 358 aa8.35□□□□□ -1.07
TRGVB-201ENST00000453257 AK7Q96M32 723 aa8.35□□□□□ -1.07
TRGVB-201ENST00000453257 SCUBE2Q9NQ36 999 aa8.35□□□□□ -1.07
TRGVB-201ENST00000453257 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
TRGVB-201ENST00000453257 PCDHGA4Q9Y5G9 962 aa8.34□□□□□ -1.07
TRGVB-201ENST00000453257 RBM33Q96EV2 1170 aaKnown RBP8.33□□□□□ -1.08
TRGVB-201ENST00000453257 RIMBP2O15034 1052 aa8.32□□□□□ -1.08
TRGVB-201ENST00000453257 MAP3K7O43318 606 aa8.32□□□□□ -1.08
TRGVB-201ENST00000453257 FCHSD2O94868 740 aa8.32□□□□□ -1.08
TRGVB-201ENST00000453257 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
TRGVB-201ENST00000453257 GNPATO15228 680 aa8.3□□□□□ -1.08
TRGVB-201ENST00000453257 TMEM132AQ24JP5 1023 aa8.3□□□□□ -1.08
TRGVB-201ENST00000453257 MAMSTRQ6ZN01 415 aa8.3□□□□□ -1.08
TRGVB-201ENST00000453257 ZNF710Q8N1W2 664 aa8.3□□□□□ -1.08
TRGVB-201ENST00000453257 GPR37O15354 613 aa8.29□□□□□ -1.08
TRGVB-201ENST00000453257 PHF14O94880 888 aa8.29□□□□□ -1.08
TRGVB-201ENST00000453257 HIC1Q14526 733 aa8.29□□□□□ -1.08
TRGVB-201ENST00000453257 EPAS1Q99814 870 aa8.29□□□□□ -1.08
TRGVB-201ENST00000453257 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
TRGVB-201ENST00000453257 NUDT7P0C024 238 aa8.28□□□□□ -1.08
TRGVB-201ENST00000453257 PRIM1P49642 420 aaKnown RBP8.28□□□□□ -1.08
TRGVB-201ENST00000453257 ANO8Q9HCE9 1232 aaPredicted RBP8.28□□□□□ -1.08
TRGVB-201ENST00000453257 POTEJP0CG39 1038 aa8.27□□□□□ -1.09
TRGVB-201ENST00000453257 EN1Q05925 392 aaPredicted RBP8.27□□□□□ -1.09
TRGVB-201ENST00000453257 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
TRGVB-201ENST00000453257 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
TRGVB-201ENST00000453257 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
TRGVB-201ENST00000453257 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
TRGVB-201ENST00000453257 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
TRGVB-201ENST00000453257 TRIM66O15016 1216 aa8.26□□□□□ -1.09
TRGVB-201ENST00000453257 ZNF454Q8N9F8 522 aa8.26□□□□□ -1.09
TRGVB-201ENST00000453257 KHSRPQ92945 711 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRGVB-201ENST00000453257 CCDC102AQ96A19 550 aa8.26□□□□□ -1.09
TRGVB-201ENST00000453257 CDHR5Q9HBB8 845 aa8.26□□□□□ -1.09
TRGVB-201ENST00000453257 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
TRGVB-201ENST00000453257 PDE4DQ08499 809 aa8.25□□□□□ -1.09
TRGVB-201ENST00000453257 PTGDRQ13258 359 aa8.25□□□□□ -1.09
TRGVB-201ENST00000453257 JPH4Q96JJ6 628 aa8.25□□□□□ -1.09
TRGVB-201ENST00000453257 FECHP22830 423 aa8.24□□□□□ -1.09
TRGVB-201ENST00000453257 TSR1Q2NL82 804 aaKnown RBP8.24□□□□□ -1.09
TRGVB-201ENST00000453257 FBXW7Q969H0 707 aa8.24□□□□□ -1.09
TRGVB-201ENST00000453257 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms